RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 PDZRN3Q9UPQ7 1066 aa30.24■■■□□ 2.43
NPAS3-203ENST00000357798 CHD1O14646 1710 aa30.24■■■□□ 2.43
NPAS3-203ENST00000357798 WDR63Q8IWG1 891 aa30.24■■■□□ 2.43
NPAS3-203ENST00000357798 KANK1Q14678 1352 aa30.22■■■□□ 2.43
NPAS3-203ENST00000357798 RWDD1Q9H446 243 aaPredicted RBP30.22■■■□□ 2.43
NPAS3-203ENST00000357798 KIF1BO60333 1816 aa30.22■■■□□ 2.43
NPAS3-203ENST00000357798 CFAP70Q5T0N1 1121 aa30.21■■■□□ 2.43
NPAS3-203ENST00000357798 ZCCHC11Q5TAX3 1644 aaKnown RBP30.21■■■□□ 2.43
NPAS3-203ENST00000357798 ARAP3Q8WWN8 1544 aa30.2■■■□□ 2.43
NPAS3-203ENST00000357798 RLBP1P12271 317 aa30.2■■■□□ 2.42
NPAS3-203ENST00000357798 USP32Q8NFA0 1604 aa30.18■■■□□ 2.42
NPAS3-203ENST00000357798 CCDC27Q2M243 656 aa30.18■■■□□ 2.42
NPAS3-203ENST00000357798 NRXN1Q9ULB1 1477 aa30.17■■■□□ 2.42
NPAS3-203ENST00000357798 NSD3Q9BZ95 1437 aa30.17■■■□□ 2.42
NPAS3-203ENST00000357798 NCBP3Q53F19 620 aaKnown RBP30.16■■■□□ 2.42
NPAS3-203ENST00000357798 TCP11L2Q8N4U5 519 aa30.16■■■□□ 2.42
NPAS3-203ENST00000357798 ZC3H13Q5T200 1668 aaKnown RBP30.15■■■□□ 2.42
NPAS3-203ENST00000357798 MORC1Q86VD1 984 aa30.15■■■□□ 2.42
NPAS3-203ENST00000357798 RRAGDQ9NQL2 400 aaPredicted RBP30.15■■■□□ 2.42
NPAS3-203ENST00000357798 SETBP1Q9Y6X0 1596 aa30.15■■■□□ 2.42
NPAS3-203ENST00000357798 ADGRF5Q8IZF2 1346 aa30.14■■■□□ 2.42
NPAS3-203ENST00000357798 TNNQ9UQP3 1299 aa30.14■■■□□ 2.41
NPAS3-203ENST00000357798 INO80Q9ULG1 1556 aaPredicted RBP30.13■■■□□ 2.41
NPAS3-203ENST00000357798 ERCC6L2Q5T890 1561 aa30.13■■■□□ 2.41
NPAS3-203ENST00000357798 FSD2A1L4K1 749 aa30.13■■■□□ 2.41
NPAS3-203ENST00000357798 RRP7AQ9Y3A4 280 aaKnown RBP30.13■■■□□ 2.41
NPAS3-203ENST00000357798 NEUROD2Q15784 382 aa30.12■■■□□ 2.41
NPAS3-203ENST00000357798 MCM4P33991 863 aa30.12■■■□□ 2.41
NPAS3-203ENST00000357798 ZNF518AQ6AHZ1 1483 aa30.12■■■□□ 2.41
NPAS3-203ENST00000357798 MROH2AA6NES4 1674 aa30.11■■■□□ 2.41
NPAS3-203ENST00000357798 ATP7AQ04656 1500 aa30.1■■■□□ 2.41
NPAS3-203ENST00000357798 GOLGA6L3A6NEY3 463 aa30.1■■■□□ 2.41
NPAS3-203ENST00000357798 UGGT1Q9NYU2 1555 aa30.1■■■□□ 2.41
NPAS3-203ENST00000357798 MVPQ14764 893 aaKnown RBP30.1■■■□□ 2.41
NPAS3-203ENST00000357798 UHRF1BP1LA0JNW5 1464 aa30.09■■■□□ 2.41
NPAS3-203ENST00000357798 MYH16Q9H6N6 1097 aa30.09■■■□□ 2.41
NPAS3-203ENST00000357798 MROH1Q8NDA8 1641 aa30.09■■■□□ 2.41
NPAS3-203ENST00000357798 AFAP1Q8N556 730 aa30.08■■■□□ 2.41
NPAS3-203ENST00000357798 CHMP5Q9NZZ3 219 aa30.08■■■□□ 2.41
NPAS3-203ENST00000357798 QRICH2Q9H0J4 1663 aa30.07■■■□□ 2.4
NPAS3-203ENST00000357798 ADGRL1O94910 1474 aa30.07■■■□□ 2.4
NPAS3-203ENST00000357798 XRCC6P12956 609 aaKnown RBP eCLIP30.06■■■□□ 2.4
NPAS3-203ENST00000357798 ADGRB2O60241 1585 aa30.06■■■□□ 2.4
NPAS3-203ENST00000357798 BCL2L13Q9BXK5 485 aa30.06■■■□□ 2.4
NPAS3-203ENST00000357798 EFCAB6Q5THR3 1501 aa30.05■■■□□ 2.4
NPAS3-203ENST00000357798 CFAP53Q96M91 514 aa30.04■■■□□ 2.4
NPAS3-203ENST00000357798 C22orf23Q9BZE7 217 aa30.04■■■□□ 2.4
NPAS3-203ENST00000357798 CT47B1P0C2W7 299 aaPredicted RBP30.04■■■□□ 2.4
NPAS3-203ENST00000357798 ZKSCAN2Q63HK3 967 aa30.04■■■□□ 2.4
NPAS3-203ENST00000357798 DZIP1LQ8IYY4 767 aaKnown RBP30.01■■■□□ 2.39
NPAS3-203ENST00000357798 ADGRB3O60242 1522 aa30■■■□□ 2.39
NPAS3-203ENST00000357798 TNNT2P45379 298 aaPredicted RBP29.99■■■□□ 2.39
NPAS3-203ENST00000357798 MTHFSP49914 203 aa29.99■■■□□ 2.39
NPAS3-203ENST00000357798 KIF3BO15066 747 aa29.98■■■□□ 2.39
NPAS3-203ENST00000357798 HDAC1Q13547 482 aaPredicted RBP29.98■■■□□ 2.39
NPAS3-203ENST00000357798 FTSJ3Q8IY81 847 aaKnown RBP29.98■■■□□ 2.39
NPAS3-203ENST00000357798 ABCA9Q8IUA7 1624 aa29.97■■■□□ 2.39
NPAS3-203ENST00000357798 SLC12A5Q9H2X9 1139 aa29.97■■■□□ 2.39
NPAS3-203ENST00000357798 FANCAO15360 1455 aa29.96■■■□□ 2.39
NPAS3-203ENST00000357798 TRAK2O60296 914 aa29.96■■■□□ 2.39
NPAS3-203ENST00000357798 PPRC1Q5VV67 1664 aaKnown RBP29.96■■■□□ 2.39
NPAS3-203ENST00000357798 SPRYD3Q8NCJ5 442 aa29.96■■■□□ 2.39
NPAS3-203ENST00000357798 NOS1P29475 1434 aa29.96■■■□□ 2.39
NPAS3-203ENST00000357798 MFAP1P55081 439 aaKnown RBP29.95■■■□□ 2.39
NPAS3-203ENST00000357798 NSD2O96028 1365 aa29.95■■■□□ 2.39
NPAS3-203ENST00000357798 CLCN1P35523 988 aa29.94■■■□□ 2.38
NPAS3-203ENST00000357798 PPLO60437 1756 aa29.94■■■□□ 2.38
NPAS3-203ENST00000357798 NCOA3Q9Y6Q9 1424 aa29.94■■■□□ 2.38
NPAS3-203ENST00000357798 MRE11P49959 708 aa29.94■■■□□ 2.38
NPAS3-203ENST00000357798 LMTK2Q8IWU2 1503 aa29.94■■■□□ 2.38
NPAS3-203ENST00000357798 ADGRB1O14514 1584 aa29.93■■■□□ 2.38
NPAS3-203ENST00000357798 DDX11L8A8MPP1 907 aa29.93■■■□□ 2.38
NPAS3-203ENST00000357798 HSCBQ8IWL3 235 aa29.92■■■□□ 2.38
NPAS3-203ENST00000357798 ISY1Q9ULR0 285 aaKnown RBP29.92■■■□□ 2.38
NPAS3-203ENST00000357798 PANK2Q9BZ23 570 aa29.91■■■□□ 2.38
NPAS3-203ENST00000357798 GZF1Q9H116 711 aaPredicted RBP29.91■■■□□ 2.38
NPAS3-203ENST00000357798 DDX19BQ9UMR2 479 aa29.91■■■□□ 2.38
NPAS3-203ENST00000357798 ZNF692Q9BU19 519 aaPredicted RBP29.91■■■□□ 2.38
NPAS3-203ENST00000357798 SMC5Q8IY18 1101 aa29.89■■■□□ 2.38
NPAS3-203ENST00000357798 PUS7Q96PZ0 661 aaKnown RBP29.89■■■□□ 2.38
NPAS3-203ENST00000357798 ARXQ96QS3 562 aa29.89■■■□□ 2.38
NPAS3-203ENST00000357798 TRAK1Q9UPV9 953 aa29.88■■■□□ 2.37
NPAS3-203ENST00000357798 PNNQ9H307 717 aaKnown RBP29.88■■■□□ 2.37
NPAS3-203ENST00000357798 C14orf93Q9H972 538 aaKnown RBP29.88■■■□□ 2.37
NPAS3-203ENST00000357798 SMC4Q9NTJ3 1288 aa29.88■■■□□ 2.37
NPAS3-203ENST00000357798 U2AF1L5P0DN76 240 aaPredicted RBP29.87■■■□□ 2.37
NPAS3-203ENST00000357798 U2AF1Q01081 240 aaKnown RBP eCLIP29.87■■■□□ 2.37
NPAS3-203ENST00000357798 TRIM27P14373 513 aa29.86■■■□□ 2.37
NPAS3-203ENST00000357798 DDIT3P35638 169 aa29.86■■■□□ 2.37
NPAS3-203ENST00000357798 ANKRD36BQ8N2N9 1353 aa29.85■■■□□ 2.37
NPAS3-203ENST00000357798 SNX21Q969T3 373 aa29.85■■■□□ 2.37
NPAS3-203ENST00000357798 RBM25P49756 843 aaKnown RBP29.85■■■□□ 2.37
NPAS3-203ENST00000357798 ATF7IPQ6VMQ6 1270 aa29.83■■■□□ 2.37
NPAS3-203ENST00000357798 EXOSC9Q06265 439 aaKnown RBP29.82■■■□□ 2.36
NPAS3-203ENST00000357798 GRPEL1Q9HAV7 217 aa29.82■■■□□ 2.36
NPAS3-203ENST00000357798 ITPRIPQ8IWB1 547 aa29.82■■■□□ 2.36
NPAS3-203ENST00000357798 TSR2Q969E8 191 aaKnown RBP29.82■■■□□ 2.36
NPAS3-203ENST00000357798 CIZ1Q9ULV3 898 aaPredicted RBP29.81■■■□□ 2.36
NPAS3-203ENST00000357798 ABCC11Q96J66 1382 aa29.81■■■□□ 2.36
NPAS3-203ENST00000357798 SSH1Q8WYL5 1049 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms