RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 TNRQ92752 1358 aa18.53■□□□□ 0.56
LSS-201ENST00000356396 YTHDC2Q9H6S0 1430 aaKnown RBP18.52■□□□□ 0.56
LSS-201ENST00000356396 BRD4O60885 1362 aaPredicted RBP18.52■□□□□ 0.56
LSS-201ENST00000356396 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
LSS-201ENST00000356396 ZMYM4Q5VZL5 1548 aa18.51■□□□□ 0.55
LSS-201ENST00000356396 A0A1W2PP64 1363 aa18.5■□□□□ 0.55
LSS-201ENST00000356396 NME9Q86XW9 330 aa18.5■□□□□ 0.55
LSS-201ENST00000356396 ARHGAP31Q2M1Z3 1444 aa18.49■□□□□ 0.55
LSS-201ENST00000356396 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
LSS-201ENST00000356396 RRS1Q15050 365 aaKnown RBP18.49■□□□□ 0.55
LSS-201ENST00000356396 PTPRMP28827 1452 aa18.49■□□□□ 0.55
LSS-201ENST00000356396 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
LSS-201ENST00000356396 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
LSS-201ENST00000356396 TULP4Q9NRJ4 1543 aa18.48■□□□□ 0.55
LSS-201ENST00000356396 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
LSS-201ENST00000356396 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
LSS-201ENST00000356396 BCL2L13Q9BXK5 485 aa18.47■□□□□ 0.55
LSS-201ENST00000356396 ARHGEF40Q8TER5 1519 aa18.46■□□□□ 0.55
LSS-201ENST00000356396 FYB1O15117 783 aa18.46■□□□□ 0.55
LSS-201ENST00000356396 C20orf194Q5TEA3 1177 aa18.46■□□□□ 0.55
LSS-201ENST00000356396 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
LSS-201ENST00000356396 MYOM1P52179 1685 aa18.46■□□□□ 0.55
LSS-201ENST00000356396 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
LSS-201ENST00000356396 XPCQ01831 940 aaPredicted RBP18.46■□□□□ 0.55
LSS-201ENST00000356396 HMOX1P09601 288 aa18.45■□□□□ 0.54
LSS-201ENST00000356396 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
LSS-201ENST00000356396 ZBTB7CA1YPR0 619 aa18.45■□□□□ 0.54
LSS-201ENST00000356396 AMOTL2Q9Y2J4 779 aa18.45■□□□□ 0.54
LSS-201ENST00000356396 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
LSS-201ENST00000356396 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
LSS-201ENST00000356396 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
LSS-201ENST00000356396 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
LSS-201ENST00000356396 ROBO2Q9HCK4 1378 aa18.44■□□□□ 0.54
LSS-201ENST00000356396 HSPA2P54652 639 aa18.43■□□□□ 0.54
LSS-201ENST00000356396 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
LSS-201ENST00000356396 PRR36Q9H6K5 1346 aa18.42■□□□□ 0.54
LSS-201ENST00000356396 NUDT16Q96DE0 195 aaKnown RBP18.42■□□□□ 0.54
LSS-201ENST00000356396 KDM5AP29375 1690 aaKnown RBP18.42■□□□□ 0.54
LSS-201ENST00000356396 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
LSS-201ENST00000356396 KCNA6P17658 529 aa18.41■□□□□ 0.54
LSS-201ENST00000356396 TMEM2Q9UHN6 1383 aa18.4■□□□□ 0.54
LSS-201ENST00000356396 LAMC1P11047 1609 aa18.39■□□□□ 0.54
LSS-201ENST00000356396 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
LSS-201ENST00000356396 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
LSS-201ENST00000356396 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
LSS-201ENST00000356396 RCAN3Q9UKA8 241 aa18.39■□□□□ 0.53
LSS-201ENST00000356396 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
LSS-201ENST00000356396 BCAR3O75815 825 aa18.37■□□□□ 0.53
LSS-201ENST00000356396 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
LSS-201ENST00000356396 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
LSS-201ENST00000356396 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
LSS-201ENST00000356396 TNNQ9UQP3 1299 aa18.36■□□□□ 0.53
LSS-201ENST00000356396 TCP11L2Q8N4U5 519 aa18.36■□□□□ 0.53
LSS-201ENST00000356396 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
LSS-201ENST00000356396 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
LSS-201ENST00000356396 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
LSS-201ENST00000356396 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
LSS-201ENST00000356396 AGLP35573 1532 aa18.35■□□□□ 0.53
LSS-201ENST00000356396 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
LSS-201ENST00000356396 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
LSS-201ENST00000356396 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
LSS-201ENST00000356396 DDX17Q92841 729 aaKnown RBP18.33■□□□□ 0.53
LSS-201ENST00000356396 PTPRUQ92729 1446 aa18.33■□□□□ 0.52
LSS-201ENST00000356396 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.52
LSS-201ENST00000356396 ZC3H13Q5T200 1668 aaKnown RBP18.32■□□□□ 0.52
LSS-201ENST00000356396 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
LSS-201ENST00000356396 ANKRD36BQ8N2N9 1353 aa18.32■□□□□ 0.52
LSS-201ENST00000356396 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
LSS-201ENST00000356396 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.31■□□□□ 0.52
LSS-201ENST00000356396 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
LSS-201ENST00000356396 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
LSS-201ENST00000356396 PPIP5K1Q6PFW1 1433 aa18.31■□□□□ 0.52
LSS-201ENST00000356396 CLUAP1Q96AJ1 413 aa18.31■□□□□ 0.52
LSS-201ENST00000356396 CCDC136Q96JN2 1154 aa18.3■□□□□ 0.52
LSS-201ENST00000356396 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
LSS-201ENST00000356396 ACEP12821 1306 aa18.3■□□□□ 0.52
LSS-201ENST00000356396 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
LSS-201ENST00000356396 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
LSS-201ENST00000356396 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
LSS-201ENST00000356396 NGDNQ8NEJ9 315 aaKnown RBP18.29■□□□□ 0.52
LSS-201ENST00000356396 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
LSS-201ENST00000356396 RRP1P56182 461 aaKnown RBP18.29■□□□□ 0.52
LSS-201ENST00000356396 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
LSS-201ENST00000356396 SMG6Q86US8 1419 aaKnown RBP18.29■□□□□ 0.52
LSS-201ENST00000356396 CRBNQ96SW2 442 aa18.29■□□□□ 0.52
LSS-201ENST00000356396 CD163L1Q9NR16 1453 aa18.29■□□□□ 0.52
LSS-201ENST00000356396 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
LSS-201ENST00000356396 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
LSS-201ENST00000356396 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
LSS-201ENST00000356396 SBNO2Q9Y2G9 1366 aa18.28■□□□□ 0.52
LSS-201ENST00000356396 AEBP1Q8IUX7 1158 aa18.27■□□□□ 0.52
LSS-201ENST00000356396 PHACTR3Q96KR7 559 aa18.27■□□□□ 0.52
LSS-201ENST00000356396 FAM83GA6ND36 823 aa18.27■□□□□ 0.51
LSS-201ENST00000356396 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
LSS-201ENST00000356396 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
LSS-201ENST00000356396 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
LSS-201ENST00000356396 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
LSS-201ENST00000356396 C3P01024 1663 aa18.24■□□□□ 0.51
LSS-201ENST00000356396 ABCC11Q96J66 1382 aa18.23■□□□□ 0.51
LSS-201ENST00000356396 PRKAR2BP31323 418 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms