RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.2□□□□□ -1.11e-6■■■■■ 34.9
NF1-201ENST00000356175 XRCC6P12956 609 aaKnown RBP eCLIP8.2□□□□□ -1.1
NF1-201ENST00000356175 BICD2Q8TD16 824 aa8.2□□□□□ -1.1
NF1-201ENST00000356175 MYCBPQ99417 103 aaPredicted RBP8.2□□□□□ -1.1
NF1-201ENST00000356175 WASHC2AQ641Q2 1341 aa8.2□□□□□ -1.1
NF1-201ENST00000356175 LRRFIP2Q9Y608 721 aaKnown RBP8.2□□□□□ -1.1
NF1-201ENST00000356175 DDX11Q96FC9 970 aa8.2□□□□□ -1.1
NF1-201ENST00000356175 A0A0G2JS52 829 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 FMNL2Q96PY5 1086 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 CLASRPQ8N2M8 674 aaKnown RBP8.19□□□□□ -1.1
NF1-201ENST00000356175 SUDS3Q9H7L9 328 aaPredicted RBP8.19□□□□□ -1.1
NF1-201ENST00000356175 COG6Q9Y2V7 657 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 SOGA1O94964 1423 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 TMCO5BA8MYB1 307 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 H3BQV1 296 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 LIG1P18858 919 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 GTF2E1P29083 439 aaPredicted RBP8.19□□□□□ -1.1
NF1-201ENST00000356175 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 TRMT1Q9NXH9 659 aaKnown RBP8.19□□□□□ -1.1
NF1-201ENST00000356175 ABCC9O60706 1549 aa8.19□□□□□ -1.1
NF1-201ENST00000356175 MYCNP04198 464 aaPredicted RBP8.18□□□□□ -1.1
NF1-201ENST00000356175 SLC26A8Q96RN1 970 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 KDM4AO75164 1064 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 PPARDQ03181 441 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 RALBP1Q15311 655 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 U2AF2P26368 475 aaKnown RBP eCLIP8.18□□□□□ -1.16e-7■■■■□ 25.1
NF1-201ENST00000356175 KRT222Q8N1A0 295 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 TPM1P09493 284 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 STAC3Q96MF2 364 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 PPP2R5AQ15172 486 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 CLNS1AP54105 237 aaKnown RBP8.18□□□□□ -1.1
NF1-201ENST00000356175 FIBPO43427 364 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 DMTNQ08495 405 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 MICALL1Q8N3F8 863 aa8.18□□□□□ -1.1
NF1-201ENST00000356175 MAPK8IP3Q9UPT6 1336 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 TNIKQ9UKE5 1360 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 NINQ8N4C6 2090 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 CLCN1P35523 988 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 RASSF4Q9H2L5 321 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 RAB3GAP2Q9H2M9 1393 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 KRBA2Q6ZNG9 492 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 INCENPQ9NQS7 918 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 BCCIPQ9P287 314 aaKnown RBP eCLIP8.17□□□□□ -1.12e-7■■■■■ 30.3
NF1-201ENST00000356175 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 RABEP2Q9H5N1 569 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
NF1-201ENST00000356175 SSBP05455 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
NF1-201ENST00000356175 PRDM2Q13029 1718 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 DCTN1Q14203 1278 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 ANKRD45Q5TZF3 282 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 PSMD1Q99460 953 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 PIBF1Q8WXW3 757 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 LRRCC1Q9C099 1032 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 SF3A1Q15459 793 aaKnown RBP8.16□□□□□ -1.1
NF1-201ENST00000356175 TXLNBQ8N3L3 684 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 PCMTD1Q96MG8 357 aaPredicted RBP8.16□□□□□ -1.1
NF1-201ENST00000356175 MRFAP1Q9Y605 127 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 BIRC2Q13490 618 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 TMCO3Q6UWJ1 677 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 RPAINQ86UA6 219 aa8.16□□□□□ -1.1
NF1-201ENST00000356175 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
NF1-201ENST00000356175 ISM2Q6H9L7 571 aa8.15□□□□□ -1.1
NF1-201ENST00000356175 GBP6Q6ZN66 633 aa8.15□□□□□ -1.1
NF1-201ENST00000356175 CEBPZQ03701 1054 aaKnown RBP8.15□□□□□ -1.1
NF1-201ENST00000356175 ODF2Q5BJF6 829 aa8.15□□□□□ -1.1
NF1-201ENST00000356175 RILPL2Q969X0 211 aa8.15□□□□□ -1.11
NF1-201ENST00000356175 BIN2Q9UBW5 565 aaPredicted RBP8.15□□□□□ -1.11
NF1-201ENST00000356175 FAM160A1Q05DH4 1040 aa8.15□□□□□ -1.11
NF1-201ENST00000356175 CENPJQ9HC77 1338 aaPredicted RBP8.15□□□□□ -1.11
NF1-201ENST00000356175 TMX4Q9H1E5 349 aaPredicted RBP8.15□□□□□ -1.11
NF1-201ENST00000356175 MICALCLQ6ZW33 695 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 TAX1BP1Q86VP1 789 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 ISY1Q9ULR0 285 aaKnown RBP8.14□□□□□ -1.11
NF1-201ENST00000356175 SMC4Q9NTJ3 1288 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 RASSF8Q8NHQ8 419 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 MRFAP1L1Q96HT8 127 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 GOLGA6L10A0A0M3HER8 536 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 GOLGA6L10A6NI86 522 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 PEX19P40855 299 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 E2F4Q16254 413 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
NF1-201ENST00000356175 TSR1Q2NL82 804 aaKnown RBP8.13□□□□□ -1.11
NF1-201ENST00000356175 SLC24A3Q9HC58 644 aa8.13□□□□□ -1.11
NF1-201ENST00000356175 ZSWIM4Q9H7M6 989 aa8.13□□□□□ -1.11
NF1-201ENST00000356175 MYH8P13535 1937 aa8.13□□□□□ -1.11
NF1-201ENST00000356175 CAMK4Q16566 473 aa8.13□□□□□ -1.11
NF1-201ENST00000356175 TMCO4Q5TGY1 634 aa8.13□□□□□ -1.11
NF1-201ENST00000356175 WRNQ14191 1432 aaPredicted RBP eCLIP8.13□□□□□ -1.112e-6■■■■□ 22.3
NF1-201ENST00000356175 CCNB3Q8WWL7 1395 aa8.13□□□□□ -1.11
NF1-201ENST00000356175 AKAP17AQ02040 695 aaKnown RBP8.13□□□□□ -1.11
NF1-201ENST00000356175 NUP133Q8WUM0 1156 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 KANK4Q5T7N3 995 aaPredicted RBP8.12□□□□□ -1.11
NF1-201ENST00000356175 SERPINA10Q9UK55 444 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 A0A1B0GUL7 405 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 PPP1R15AO75807 674 aaPredicted RBP8.12□□□□□ -1.11
NF1-201ENST00000356175 MAP2K2P36507 400 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 BRPF1P55201 1214 aaPredicted RBP8.12□□□□□ -1.11
NF1-201ENST00000356175 SART3Q15020 963 aaKnown RBP8.12□□□□□ -1.11
NF1-201ENST00000356175 DNAJC21Q5F1R6 531 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms