RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
VAT1-201ENST00000355653 FTSJ3Q8IY81 847 aaKnown RBP19.3■□□□□ 0.68
VAT1-201ENST00000355653 CLCN1P35523 988 aa19.3■□□□□ 0.68
VAT1-201ENST00000355653 AAMPQ13685 434 aa19.29■□□□□ 0.68
VAT1-201ENST00000355653 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
VAT1-201ENST00000355653 POLR3AO14802 1390 aaPredicted RBP19.28■□□□□ 0.68
VAT1-201ENST00000355653 ABCC1P33527 1531 aa19.28■□□□□ 0.68
VAT1-201ENST00000355653 CEP152O94986 1710 aa19.28■□□□□ 0.68
VAT1-201ENST00000355653 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
VAT1-201ENST00000355653 MRE11P49959 708 aa19.27■□□□□ 0.68
VAT1-201ENST00000355653 HSCBQ8IWL3 235 aa19.27■□□□□ 0.68
VAT1-201ENST00000355653 MVPQ14764 893 aaKnown RBP19.27■□□□□ 0.67
VAT1-201ENST00000355653 KIF3BO15066 747 aa19.26■□□□□ 0.67
VAT1-201ENST00000355653 GLIPR1L2Q4G1C9 344 aa19.26■□□□□ 0.67
VAT1-201ENST00000355653 HSP90AA1P07900 732 aaKnown RBP19.26■□□□□ 0.67
VAT1-201ENST00000355653 MYH16Q9H6N6 1097 aa19.26■□□□□ 0.67
VAT1-201ENST00000355653 GRPEL1Q9HAV7 217 aa19.25■□□□□ 0.67
VAT1-201ENST00000355653 ZMYM3Q14202 1370 aa19.25■□□□□ 0.67
VAT1-201ENST00000355653 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
VAT1-201ENST00000355653 WDR63Q8IWG1 891 aa19.24■□□□□ 0.67
VAT1-201ENST00000355653 CLTCL1P53675 1640 aa19.24■□□□□ 0.67
VAT1-201ENST00000355653 HSP90AA2PQ14568 343 aaPredicted RBP19.24■□□□□ 0.67
VAT1-201ENST00000355653 ZKSCAN2Q63HK3 967 aa19.24■□□□□ 0.67
VAT1-201ENST00000355653 DZIP1LQ8IYY4 767 aaKnown RBP19.24■□□□□ 0.67
VAT1-201ENST00000355653 TRPM2O94759 1503 aa19.23■□□□□ 0.67
VAT1-201ENST00000355653 NSD3Q9BZ95 1437 aa19.23■□□□□ 0.67
VAT1-201ENST00000355653 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
VAT1-201ENST00000355653 RTEL1-TNFRSF6BF6WH68 1400 aa19.22■□□□□ 0.67
VAT1-201ENST00000355653 PTPRTO14522 1441 aa19.22■□□□□ 0.67
VAT1-201ENST00000355653 DDX11L8A8MPP1 907 aa19.22■□□□□ 0.67
VAT1-201ENST00000355653 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
VAT1-201ENST00000355653 MTHFSP49914 203 aa19.22■□□□□ 0.67
VAT1-201ENST00000355653 TSR2Q969E8 191 aaKnown RBP19.22■□□□□ 0.67
VAT1-201ENST00000355653 ITPRIPQ8IWB1 547 aa19.21■□□□□ 0.67
VAT1-201ENST00000355653 VSIG10Q8N0Z9 540 aa19.21■□□□□ 0.67
VAT1-201ENST00000355653 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
VAT1-201ENST00000355653 SMC4Q9NTJ3 1288 aa19.21■□□□□ 0.67
VAT1-201ENST00000355653 ESPNB1AK53 854 aa19.2■□□□□ 0.66
VAT1-201ENST00000355653 TRIM44Q96DX7 344 aaPredicted RBP19.2■□□□□ 0.66
VAT1-201ENST00000355653 ERBB4Q15303 1308 aa19.19■□□□□ 0.66
VAT1-201ENST00000355653 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
VAT1-201ENST00000355653 SHPRHQ149N8 1683 aa19.19■□□□□ 0.66
VAT1-201ENST00000355653 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
VAT1-201ENST00000355653 U2AF1L5P0DN76 240 aaPredicted RBP19.19■□□□□ 0.66
VAT1-201ENST00000355653 U2AF1Q01081 240 aaKnown RBP eCLIP19.19■□□□□ 0.66
VAT1-201ENST00000355653 IQSEC2Q5JU85 1478 aa19.19■□□□□ 0.66
VAT1-201ENST00000355653 ZFYVE16Q7Z3T8 1539 aa19.18■□□□□ 0.66
VAT1-201ENST00000355653 PKNOX2Q96KN3 472 aa19.18■□□□□ 0.66
VAT1-201ENST00000355653 KANK1Q14678 1352 aa19.18■□□□□ 0.66
VAT1-201ENST00000355653 CFAP53Q96M91 514 aa19.17■□□□□ 0.66
VAT1-201ENST00000355653 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
VAT1-201ENST00000355653 FOXD4L1Q9NU39 408 aa19.17■□□□□ 0.66
VAT1-201ENST00000355653 TRAK1Q9UPV9 953 aa19.16■□□□□ 0.66
VAT1-201ENST00000355653 UGGT1Q9NYU2 1555 aa19.16■□□□□ 0.66
VAT1-201ENST00000355653 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
VAT1-201ENST00000355653 TRIM27P14373 513 aa19.16■□□□□ 0.66
VAT1-201ENST00000355653 TNPO1Q92973 898 aaKnown RBP19.16■□□□□ 0.66
VAT1-201ENST00000355653 UHRF1BP1LA0JNW5 1464 aa19.15■□□□□ 0.66
VAT1-201ENST00000355653 EXOSC9Q06265 439 aaKnown RBP19.15■□□□□ 0.66
VAT1-201ENST00000355653 RRP9O43818 475 aaKnown RBP19.14■□□□□ 0.65
VAT1-201ENST00000355653 GAS2L3Q86XJ1 694 aa19.14■□□□□ 0.65
VAT1-201ENST00000355653 CHGAP10645 457 aaKnown RBP19.14■□□□□ 0.65
VAT1-201ENST00000355653 CCDC27Q2M243 656 aa19.14■□□□□ 0.65
VAT1-201ENST00000355653 ABCA6Q8N139 1617 aa19.13■□□□□ 0.65
VAT1-201ENST00000355653 HDAC1Q13547 482 aaPredicted RBP19.13■□□□□ 0.65
VAT1-201ENST00000355653 LNPKQ9C0E8 428 aa19.13■□□□□ 0.65
VAT1-201ENST00000355653 DDX19BQ9UMR2 479 aa19.13■□□□□ 0.65
VAT1-201ENST00000355653 SSH1Q8WYL5 1049 aa19.12■□□□□ 0.65
VAT1-201ENST00000355653 FANCAO15360 1455 aa19.11■□□□□ 0.65
VAT1-201ENST00000355653 GBP4Q96PP9 640 aa19.11■□□□□ 0.65
VAT1-201ENST00000355653 ZMYND15Q9H091 742 aa19.11■□□□□ 0.65
VAT1-201ENST00000355653 NOB1Q9ULX3 412 aaKnown RBP19.11■□□□□ 0.65
VAT1-201ENST00000355653 KIAA1210Q9ULL0 1709 aa19.11■□□□□ 0.65
VAT1-201ENST00000355653 U2SURPO15042 1029 aaKnown RBP19.1■□□□□ 0.65
VAT1-201ENST00000355653 ATF7IPQ6VMQ6 1270 aa19.1■□□□□ 0.65
VAT1-201ENST00000355653 TMEM57Q8N5G2 664 aa19.1■□□□□ 0.65
VAT1-201ENST00000355653 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
VAT1-201ENST00000355653 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
VAT1-201ENST00000355653 MAP3K4Q9Y6R4 1608 aa19.1■□□□□ 0.65
VAT1-201ENST00000355653 ISY1Q9ULR0 285 aaKnown RBP19.09■□□□□ 0.65
VAT1-201ENST00000355653 TET3O43151 1660 aa19.09■□□□□ 0.65
VAT1-201ENST00000355653 DDIT3P35638 169 aa19.09■□□□□ 0.65
VAT1-201ENST00000355653 SMC5Q8IY18 1101 aa19.09■□□□□ 0.65
VAT1-201ENST00000355653 RBM25P49756 843 aaKnown RBP19.08■□□□□ 0.65
VAT1-201ENST00000355653 NCOA3Q9Y6Q9 1424 aa19.08■□□□□ 0.64
VAT1-201ENST00000355653 DEPDC5O75140 1603 aa19.08■□□□□ 0.64
VAT1-201ENST00000355653 TMEM132EQ6IEE7 984 aa19.07■□□□□ 0.64
VAT1-201ENST00000355653 SNX21Q969T3 373 aa19.07■□□□□ 0.64
VAT1-201ENST00000355653 ADGRL1O94910 1474 aa19.06■□□□□ 0.64
VAT1-201ENST00000355653 RAB3GAP1Q15042 981 aa19.06■□□□□ 0.64
VAT1-201ENST00000355653 CD2BP2O95400 341 aaKnown RBP19.05■□□□□ 0.64
VAT1-201ENST00000355653 VWDEQ8N2E2 1590 aa19.05■□□□□ 0.64
VAT1-201ENST00000355653 MYOM2P54296 1465 aa19.05■□□□□ 0.64
VAT1-201ENST00000355653 NUCB1Q02818 461 aa19.04■□□□□ 0.64
VAT1-201ENST00000355653 ZBTB40Q9NUA8 1239 aa19.04■□□□□ 0.64
VAT1-201ENST00000355653 SKOR2Q2VWA4 1001 aaPredicted RBP19.04■□□□□ 0.64
VAT1-201ENST00000355653 ARAP3Q8WWN8 1544 aa19.04■□□□□ 0.64
VAT1-201ENST00000355653 CT47B1P0C2W7 299 aaPredicted RBP19.03■□□□□ 0.64
VAT1-201ENST00000355653 CIZ1Q9ULV3 898 aaPredicted RBP19.03■□□□□ 0.64
VAT1-201ENST00000355653 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms