RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 DIP2BQ9P265 1576 aa28.58■■■□□ 2.17
LIMS2-202ENST00000355119 ANKRD36BQ8N2N9 1353 aa28.57■■■□□ 2.16
LIMS2-202ENST00000355119 ERICH6Q7L0X2 663 aa28.57■■■□□ 2.16
LIMS2-202ENST00000355119 NSD2O96028 1365 aa28.57■■■□□ 2.16
LIMS2-202ENST00000355119 MYO5BQ9ULV0 1848 aa28.56■■■□□ 2.16
LIMS2-202ENST00000355119 RIMBP3CA6NJZ7 1639 aa28.56■■■□□ 2.16
LIMS2-202ENST00000355119 RIMBP3BA6NNM3 1639 aa28.56■■■□□ 2.16
LIMS2-202ENST00000355119 RIMBP3Q9UFD9 1639 aa28.56■■■□□ 2.16
LIMS2-202ENST00000355119 REREQ9P2R6 1566 aa28.56■■■□□ 2.16
LIMS2-202ENST00000355119 SHPRHQ149N8 1683 aa28.55■■■□□ 2.16
LIMS2-202ENST00000355119 E9PSI1 815 aa28.55■■■□□ 2.16
LIMS2-202ENST00000355119 FAM69CQ0P6D2 419 aa28.54■■■□□ 2.16
LIMS2-202ENST00000355119 NKTRP30414 1462 aaKnown RBP28.54■■■□□ 2.16
LIMS2-202ENST00000355119 NINLQ9Y2I6 1382 aa28.53■■■□□ 2.16
LIMS2-202ENST00000355119 AGLP35573 1532 aa28.52■■■□□ 2.16
LIMS2-202ENST00000355119 PPP6R1Q9UPN7 881 aa28.51■■■□□ 2.15
LIMS2-202ENST00000355119 MS4A1P11836 297 aa28.5■■■□□ 2.15
LIMS2-202ENST00000355119 C20orf194Q5TEA3 1177 aa28.49■■■□□ 2.15
LIMS2-202ENST00000355119 CFAP53Q96M91 514 aa28.48■■■□□ 2.15
LIMS2-202ENST00000355119 PTPRMP28827 1452 aa28.46■■■□□ 2.15
LIMS2-202ENST00000355119 TNNT2P45379 298 aaPredicted RBP28.46■■■□□ 2.15
LIMS2-202ENST00000355119 RUNDC1Q96C34 613 aa28.46■■■□□ 2.15
LIMS2-202ENST00000355119 CABP2Q9NPB3 220 aa28.46■■■□□ 2.15
LIMS2-202ENST00000355119 SPINK5Q9NQ38 1064 aaPredicted RBP28.46■■■□□ 2.15
LIMS2-202ENST00000355119 ANP32AP39687 249 aaKnown RBP28.45■■■□□ 2.15
LIMS2-202ENST00000355119 YTHDC2Q9H6S0 1430 aaKnown RBP28.44■■■□□ 2.14
LIMS2-202ENST00000355119 STK26Q9P289 416 aa28.44■■■□□ 2.14
LIMS2-202ENST00000355119 CLTCQ00610 1675 aaKnown RBP28.44■■■□□ 2.14
LIMS2-202ENST00000355119 MTHFSP49914 203 aa28.43■■■□□ 2.14
LIMS2-202ENST00000355119 FBXO31Q5XUX0 539 aaPredicted RBP28.43■■■□□ 2.14
LIMS2-202ENST00000355119 ATAD2Q6PL18 1390 aa28.43■■■□□ 2.14
LIMS2-202ENST00000355119 IQSEC2Q5JU85 1478 aa28.43■■■□□ 2.14
LIMS2-202ENST00000355119 TSPOAP1O95153 1857 aa28.42■■■□□ 2.14
LIMS2-202ENST00000355119 WWC1Q8IX03 1113 aa28.42■■■□□ 2.14
LIMS2-202ENST00000355119 ALKQ9UM73 1620 aa28.41■■■□□ 2.14
LIMS2-202ENST00000355119 SAFB2Q14151 953 aaKnown RBP eCLIP28.4■■■□□ 2.14
LIMS2-202ENST00000355119 ABCC11Q96J66 1382 aa28.4■■■□□ 2.14
LIMS2-202ENST00000355119 SRPK2P78362 688 aaKnown RBP28.4■■■□□ 2.14
LIMS2-202ENST00000355119 KDM2BQ8NHM5 1336 aa28.39■■■□□ 2.13
LIMS2-202ENST00000355119 A0A1W2PP64 1363 aa28.38■■■□□ 2.13
LIMS2-202ENST00000355119 NCBP3Q53F19 620 aaKnown RBP28.38■■■□□ 2.13
LIMS2-202ENST00000355119 CENPQQ7L2Z9 268 aaPredicted RBP28.38■■■□□ 2.13
LIMS2-202ENST00000355119 POGKQ9P215 609 aa28.38■■■□□ 2.13
LIMS2-202ENST00000355119 STAG3Q9UJ98 1225 aa28.38■■■□□ 2.13
LIMS2-202ENST00000355119 PRAM1Q96QH2 718 aa28.37■■■□□ 2.13
LIMS2-202ENST00000355119 NOP58Q9Y2X3 529 aaKnown RBP28.37■■■□□ 2.13
LIMS2-202ENST00000355119 DMRT2Q9Y5R5 561 aa28.37■■■□□ 2.13
LIMS2-202ENST00000355119 PDE4AP27815 886 aa28.36■■■□□ 2.13
LIMS2-202ENST00000355119 SPATA31D1Q6ZQQ2 1576 aa28.36■■■□□ 2.13
LIMS2-202ENST00000355119 TERF2IPQ9NYB0 399 aa28.35■■■□□ 2.13
LIMS2-202ENST00000355119 TCP11L2Q8N4U5 519 aa28.35■■■□□ 2.13
LIMS2-202ENST00000355119 IPO9Q96P70 1041 aaKnown RBP28.35■■■□□ 2.13
LIMS2-202ENST00000355119 PHF23Q9BUL5 403 aaPredicted RBP28.35■■■□□ 2.13
LIMS2-202ENST00000355119 MED14O60244 1454 aa28.33■■■□□ 2.13
LIMS2-202ENST00000355119 CCDC27Q2M243 656 aa28.33■■■□□ 2.13
LIMS2-202ENST00000355119 WDR63Q8IWG1 891 aa28.33■■■□□ 2.13
LIMS2-202ENST00000355119 BACH2Q9BYV9 841 aa28.33■■■□□ 2.13
LIMS2-202ENST00000355119 MINK1Q8N4C8 1332 aaPredicted RBP28.33■■■□□ 2.13
LIMS2-202ENST00000355119 ANKRD26Q9UPS8 1709 aa28.32■■■□□ 2.12
LIMS2-202ENST00000355119 A2ML1A8K2U0 1454 aa28.31■■■□□ 2.12
LIMS2-202ENST00000355119 DLC1Q96QB1 1528 aa28.31■■■□□ 2.12
LIMS2-202ENST00000355119 BCAR3O75815 825 aa28.31■■■□□ 2.12
LIMS2-202ENST00000355119 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
LIMS2-202ENST00000355119 CD163L1Q9NR16 1453 aa28.29■■■□□ 2.12
LIMS2-202ENST00000355119 ARHGEF40Q8TER5 1519 aa28.28■■■□□ 2.12
LIMS2-202ENST00000355119 PDE3AQ14432 1141 aa28.28■■■□□ 2.12
LIMS2-202ENST00000355119 RRP7AQ9Y3A4 280 aaKnown RBP28.28■■■□□ 2.12
LIMS2-202ENST00000355119 RIMS2Q9UQ26 1411 aa28.27■■■□□ 2.12
LIMS2-202ENST00000355119 ADGRB2O60241 1585 aa28.27■■■□□ 2.12
LIMS2-202ENST00000355119 NEUROD2Q15784 382 aa28.26■■■□□ 2.12
LIMS2-202ENST00000355119 HDGFL2Q7Z4V5 671 aaPredicted RBP28.26■■■□□ 2.12
LIMS2-202ENST00000355119 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.11
LIMS2-202ENST00000355119 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.11
LIMS2-202ENST00000355119 CDK19Q9BWU1 502 aa28.25■■■□□ 2.11
LIMS2-202ENST00000355119 GGNBP2Q9H3C7 697 aa28.23■■■□□ 2.11
LIMS2-202ENST00000355119 NLRP1Q9C000 1473 aa28.23■■■□□ 2.11
LIMS2-202ENST00000355119 SETD1AO15047 1707 aaKnown RBP28.23■■■□□ 2.11
LIMS2-202ENST00000355119 COL3A1P02461 1466 aaPredicted RBP28.23■■■□□ 2.11
LIMS2-202ENST00000355119 FYB1O15117 783 aa28.22■■■□□ 2.11
LIMS2-202ENST00000355119 ZBTB47Q9UFB7 747 aaPredicted RBP28.22■■■□□ 2.11
LIMS2-202ENST00000355119 CANXP27824 592 aaKnown RBP28.2■■■□□ 2.11
LIMS2-202ENST00000355119 KIF20BQ96Q89 1820 aa28.2■■■□□ 2.1
LIMS2-202ENST00000355119 PAK3O75914 559 aaPredicted RBP28.19■■■□□ 2.1
LIMS2-202ENST00000355119 MYH16Q9H6N6 1097 aa28.19■■■□□ 2.1
LIMS2-202ENST00000355119 RARSP54136 660 aaKnown RBP28.18■■■□□ 2.1
LIMS2-202ENST00000355119 MLECQ14165 292 aa28.18■■■□□ 2.1
LIMS2-202ENST00000355119 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.18■■■□□ 2.1
LIMS2-202ENST00000355119 ATP7BP35670 1465 aa28.17■■■□□ 2.1
LIMS2-202ENST00000355119 NPM2Q86SE8 214 aaKnown RBP28.16■■■□□ 2.1
LIMS2-202ENST00000355119 SKAP1Q86WV1 359 aa28.16■■■□□ 2.1
LIMS2-202ENST00000355119 CABP1Q9NZU7 370 aa28.16■■■□□ 2.1
LIMS2-202ENST00000355119 KIF13AQ9H1H9 1805 aa28.14■■■□□ 2.1
LIMS2-202ENST00000355119 AAMPQ13685 434 aa28.14■■■□□ 2.09
LIMS2-202ENST00000355119 PLEKHF1Q96S99 279 aa28.13■■■□□ 2.09
LIMS2-202ENST00000355119 U2SURPO15042 1029 aaKnown RBP28.13■■■□□ 2.09
LIMS2-202ENST00000355119 ESF1Q9H501 851 aaKnown RBP28.13■■■□□ 2.09
LIMS2-202ENST00000355119 NRXN3Q9Y4C0 1643 aa28.12■■■□□ 2.09
LIMS2-202ENST00000355119 PNNQ9H307 717 aaKnown RBP28.11■■■□□ 2.09
LIMS2-202ENST00000355119 PNPLA6Q8IY17 1366 aa28.11■■■□□ 2.09
LIMS2-202ENST00000355119 CT47B1P0C2W7 299 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms