RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 CABP2Q9NPB3 220 aa24.87■■□□□ 1.57
TRIM41-202ENST00000351937 INSRP06213 1382 aa24.87■■□□□ 1.57
TRIM41-202ENST00000351937 MINK1Q8N4C8 1332 aaPredicted RBP24.85■■□□□ 1.57
TRIM41-202ENST00000351937 NSD3Q9BZ95 1437 aa24.85■■□□□ 1.57
TRIM41-202ENST00000351937 METP08581 1390 aa24.84■■□□□ 1.57
TRIM41-202ENST00000351937 ATAD2Q6PL18 1390 aa24.84■■□□□ 1.57
TRIM41-202ENST00000351937 ANKRD36BQ8N2N9 1353 aa24.84■■□□□ 1.57
TRIM41-202ENST00000351937 SRPK2P78362 688 aaKnown RBP24.84■■□□□ 1.57
TRIM41-202ENST00000351937 PLEKHG1Q9ULL1 1385 aa24.82■■□□□ 1.56
TRIM41-202ENST00000351937 SIRT1Q96EB6 747 aa24.82■■□□□ 1.56
TRIM41-202ENST00000351937 USP32Q8NFA0 1604 aa24.82■■□□□ 1.56
TRIM41-202ENST00000351937 BCANQ96GW7 911 aa24.81■■□□□ 1.56
TRIM41-202ENST00000351937 SLIT1O75093 1534 aa24.8■■□□□ 1.56
TRIM41-202ENST00000351937 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
TRIM41-202ENST00000351937 TECPR2O15040 1411 aa24.79■■□□□ 1.56
TRIM41-202ENST00000351937 LTKP29376 864 aa24.79■■□□□ 1.56
TRIM41-202ENST00000351937 TXNDC2Q86VQ3 553 aa24.79■■□□□ 1.56
TRIM41-202ENST00000351937 ARHGAP23Q9P227 1491 aa24.79■■□□□ 1.56
TRIM41-202ENST00000351937 WAPLQ7Z5K2 1190 aa24.79■■□□□ 1.56
TRIM41-202ENST00000351937 FAM135BQ49AJ0 1406 aa24.78■■□□□ 1.56
TRIM41-202ENST00000351937 CGNL1Q0VF96 1302 aa24.78■■□□□ 1.56
TRIM41-202ENST00000351937 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
TRIM41-202ENST00000351937 CDK19Q9BWU1 502 aa24.78■■□□□ 1.56
TRIM41-202ENST00000351937 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
TRIM41-202ENST00000351937 PLPPR3Q6T4P5 718 aa24.78■■□□□ 1.56
TRIM41-202ENST00000351937 THEMISQ8N1K5 641 aaPredicted RBP24.78■■□□□ 1.56
TRIM41-202ENST00000351937 PLEKHH1Q9ULM0 1364 aa24.77■■□□□ 1.56
TRIM41-202ENST00000351937 NEFLP07196 543 aa24.77■■□□□ 1.56
TRIM41-202ENST00000351937 BLMP54132 1417 aaPredicted RBP24.75■■□□□ 1.55
TRIM41-202ENST00000351937 NSD2O96028 1365 aa24.75■■□□□ 1.55
TRIM41-202ENST00000351937 CPS1P31327 1500 aa24.74■■□□□ 1.55
TRIM41-202ENST00000351937 TERF2IPQ9NYB0 399 aa24.74■■□□□ 1.55
TRIM41-202ENST00000351937 MORC1Q86VD1 984 aa24.73■■□□□ 1.55
TRIM41-202ENST00000351937 A0A1W2PP64 1363 aa24.73■■□□□ 1.55
TRIM41-202ENST00000351937 SMG6Q86US8 1419 aaKnown RBP24.73■■□□□ 1.55
TRIM41-202ENST00000351937 MED14O60244 1454 aa24.72■■□□□ 1.55
TRIM41-202ENST00000351937 FKBP8Q14318 412 aa24.71■■□□□ 1.55
TRIM41-202ENST00000351937 WDR43Q15061 677 aaKnown RBP eCLIP24.71■■□□□ 1.55
TRIM41-202ENST00000351937 RIMS1Q86UR5 1692 aaKnown RBP24.71■■□□□ 1.55
TRIM41-202ENST00000351937 ADAMTS8Q9UP79 889 aa24.7■■□□□ 1.55
TRIM41-202ENST00000351937 CD163L1Q9NR16 1453 aa24.69■■□□□ 1.54
TRIM41-202ENST00000351937 ADAMTSL3P82987 1691 aa24.68■■□□□ 1.54
TRIM41-202ENST00000351937 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
TRIM41-202ENST00000351937 HDGFL2Q7Z4V5 671 aaPredicted RBP24.68■■□□□ 1.54
TRIM41-202ENST00000351937 NUDCQ9Y266 331 aa24.68■■□□□ 1.54
TRIM41-202ENST00000351937 POLR3AO14802 1390 aaPredicted RBP24.67■■□□□ 1.54
TRIM41-202ENST00000351937 TBX22Q9Y458 520 aa24.67■■□□□ 1.54
TRIM41-202ENST00000351937 CEP170BQ9Y4F5 1589 aaPredicted RBP24.66■■□□□ 1.54
TRIM41-202ENST00000351937 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
TRIM41-202ENST00000351937 ROBO2Q9HCK4 1378 aa24.65■■□□□ 1.54
TRIM41-202ENST00000351937 SENP3-EIF4A1A0A087X0R7 540 aa24.64■■□□□ 1.54
TRIM41-202ENST00000351937 PDE3BQ13370 1112 aa24.64■■□□□ 1.54
TRIM41-202ENST00000351937 SLC26A8Q96RN1 970 aa24.64■■□□□ 1.54
TRIM41-202ENST00000351937 ATP7BP35670 1465 aa24.63■■□□□ 1.53
TRIM41-202ENST00000351937 DIP2AQ14689 1571 aa24.63■■□□□ 1.53
TRIM41-202ENST00000351937 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
TRIM41-202ENST00000351937 PTPRUQ92729 1446 aa24.6■■□□□ 1.53
TRIM41-202ENST00000351937 FYB1O15117 783 aa24.58■■□□□ 1.53
TRIM41-202ENST00000351937 ADGRB2O60241 1585 aa24.58■■□□□ 1.53
TRIM41-202ENST00000351937 SALL2Q9Y467 1007 aaPredicted RBP24.58■■□□□ 1.52
TRIM41-202ENST00000351937 NUDT16Q96DE0 195 aaKnown RBP24.57■■□□□ 1.52
TRIM41-202ENST00000351937 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
TRIM41-202ENST00000351937 PPIP5K1Q6PFW1 1433 aa24.57■■□□□ 1.52
TRIM41-202ENST00000351937 ZNF142P52746 1687 aaPredicted RBP24.57■■□□□ 1.52
TRIM41-202ENST00000351937 CCDC61Q9Y6R9 512 aa24.57■■□□□ 1.52
TRIM41-202ENST00000351937 MTHFSP49914 203 aa24.56■■□□□ 1.52
TRIM41-202ENST00000351937 CPSF1Q10570 1443 aaKnown RBP24.55■■□□□ 1.52
TRIM41-202ENST00000351937 PTCH1Q13635 1447 aa24.55■■□□□ 1.52
TRIM41-202ENST00000351937 GGNBP2Q9H3C7 697 aa24.55■■□□□ 1.52
TRIM41-202ENST00000351937 CFAP53Q96M91 514 aa24.55■■□□□ 1.52
TRIM41-202ENST00000351937 ANKRD26Q9UPS8 1709 aa24.54■■□□□ 1.52
TRIM41-202ENST00000351937 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.54■■□□□ 1.52
TRIM41-202ENST00000351937 SETD1BQ9UPS6 1966 aaKnown RBP24.53■■□□□ 1.52
TRIM41-202ENST00000351937 PIK3R4Q99570 1358 aa24.53■■□□□ 1.52
TRIM41-202ENST00000351937 ERICH6BQ5W0A0 696 aa24.52■■□□□ 1.52
TRIM41-202ENST00000351937 ANKLE2Q86XL3 938 aa24.52■■□□□ 1.52
TRIM41-202ENST00000351937 CDC42BPGQ6DT37 1551 aa24.5■■□□□ 1.51
TRIM41-202ENST00000351937 EDC4Q6P2E9 1401 aaKnown RBP24.5■■□□□ 1.51
TRIM41-202ENST00000351937 KIF20BQ96Q89 1820 aa24.5■■□□□ 1.51
TRIM41-202ENST00000351937 SHPRHQ149N8 1683 aa24.5■■□□□ 1.51
TRIM41-202ENST00000351937 RNF123Q5XPI4 1314 aa24.48■■□□□ 1.51
TRIM41-202ENST00000351937 PRR36Q9H6K5 1346 aa24.48■■□□□ 1.51
TRIM41-202ENST00000351937 NGEFQ8N5V2 710 aa24.48■■□□□ 1.51
TRIM41-202ENST00000351937 ZNF692Q9BU19 519 aaPredicted RBP24.48■■□□□ 1.51
TRIM41-202ENST00000351937 XRN1Q8IZH2 1706 aaKnown RBP24.47■■□□□ 1.51
TRIM41-202ENST00000351937 CCDC146Q8IYE0 955 aa24.47■■□□□ 1.51
TRIM41-202ENST00000351937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.46■■□□□ 1.51
TRIM41-202ENST00000351937 CDCA7LQ96GN5 454 aa24.46■■□□□ 1.51
TRIM41-202ENST00000351937 ZNF521Q96K83 1311 aa24.46■■□□□ 1.51
TRIM41-202ENST00000351937 NCKAP5LQ9HCH0 1330 aa24.45■■□□□ 1.5
TRIM41-202ENST00000351937 IRX6P78412 446 aaPredicted RBP24.45■■□□□ 1.5
TRIM41-202ENST00000351937 APAF1O14727 1248 aa24.44■■□□□ 1.5
TRIM41-202ENST00000351937 TSHZ2Q9NRE2 1034 aa24.43■■□□□ 1.5
TRIM41-202ENST00000351937 MON2Q7Z3U7 1717 aa24.43■■□□□ 1.5
TRIM41-202ENST00000351937 PLEKHG3A1L390 1219 aa24.42■■□□□ 1.5
TRIM41-202ENST00000351937 AKAP12Q02952 1782 aa24.42■■□□□ 1.5
TRIM41-202ENST00000351937 TOPAZ1Q8N9V7 1692 aa24.42■■□□□ 1.5
TRIM41-202ENST00000351937 ITSN1Q15811 1721 aa24.41■■□□□ 1.5
TRIM41-202ENST00000351937 KCNA6P17658 529 aa24.4■■□□□ 1.5
TRIM41-202ENST00000351937 RUNDC1Q96C34 613 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms