RNA–Protein interactions for RNA: ENST00000348227.4

WDR54-201, Transcript of WD repeat domain 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR54, Length 1,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR54-201ENST00000348227 ROBO1Q9Y6N7 1651 aa21.39■■□□□ 1.01
WDR54-201ENST00000348227 TULP4Q9NRJ4 1543 aa21.39■■□□□ 1.01
WDR54-201ENST00000348227 MSH6P52701 1360 aa21.37■■□□□ 1.01
WDR54-201ENST00000348227 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
WDR54-201ENST00000348227 TRAK1Q9UPV9 953 aa21.36■■□□□ 1.01
WDR54-201ENST00000348227 MST1RQ04912 1400 aa21.36■■□□□ 1.01
WDR54-201ENST00000348227 WAPLQ7Z5K2 1190 aa21.35■■□□□ 1.01
WDR54-201ENST00000348227 PRAM1Q96QH2 718 aa21.35■■□□□ 1.01
WDR54-201ENST00000348227 NHSL1Q5SYE7 1610 aa21.34■■□□□ 1.01
WDR54-201ENST00000348227 SIRT1Q96EB6 747 aa21.34■■□□□ 1.01
WDR54-201ENST00000348227 EIF3AQ14152 1382 aaKnown RBP21.31■■□□□ 1
WDR54-201ENST00000348227 KIF1AQ12756 1690 aa21.31■■□□□ 1
WDR54-201ENST00000348227 ATP7BP35670 1465 aa21.29■■□□□ 1
WDR54-201ENST00000348227 USP47Q96K76 1375 aa21.29■■□□□ 1
WDR54-201ENST00000348227 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
WDR54-201ENST00000348227 SAFB2Q14151 953 aaKnown RBP eCLIP21.28■■□□□ 1
WDR54-201ENST00000348227 CARD11Q9BXL7 1154 aa21.28■■□□□ 1
WDR54-201ENST00000348227 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
WDR54-201ENST00000348227 C14orf37Q86TY3 774 aa21.27■■□□□ 1
WDR54-201ENST00000348227 C19orf44Q9H6X5 657 aa21.27■■□□□ 1
WDR54-201ENST00000348227 C1orf167Q5SNV9 1468 aa21.26■□□□□ 0.99
WDR54-201ENST00000348227 AHDC1Q5TGY3 1603 aaPredicted RBP21.26■□□□□ 0.99
WDR54-201ENST00000348227 COL16A1Q07092 1604 aaPredicted RBP21.25■□□□□ 0.99
WDR54-201ENST00000348227 MYOM1P52179 1685 aa21.24■□□□□ 0.99
WDR54-201ENST00000348227 POGKQ9P215 609 aa21.24■□□□□ 0.99
WDR54-201ENST00000348227 MINK1Q8N4C8 1332 aaPredicted RBP21.24■□□□□ 0.99
WDR54-201ENST00000348227 PHLPP1O60346 1717 aa21.24■□□□□ 0.99
WDR54-201ENST00000348227 ANKARQ7Z5J8 1434 aa21.23■□□□□ 0.99
WDR54-201ENST00000348227 UBAP1LF5GYI3 381 aa21.23■□□□□ 0.99
WDR54-201ENST00000348227 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
WDR54-201ENST00000348227 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
WDR54-201ENST00000348227 AKAP12Q02952 1782 aa21.2■□□□□ 0.99
WDR54-201ENST00000348227 ATF3P18847 181 aa21.19■□□□□ 0.98
WDR54-201ENST00000348227 TRPM3Q9HCF6 1732 aaPredicted RBP21.18■□□□□ 0.98
WDR54-201ENST00000348227 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
WDR54-201ENST00000348227 TOM1O60784 492 aa21.17■□□□□ 0.98
WDR54-201ENST00000348227 FBXO41Q8TF61 875 aa21.17■□□□□ 0.98
WDR54-201ENST00000348227 TESK2Q96S53 571 aa21.17■□□□□ 0.98
WDR54-201ENST00000348227 NRKQ7Z2Y5 1582 aa21.17■□□□□ 0.98
WDR54-201ENST00000348227 MON2Q7Z3U7 1717 aa21.16■□□□□ 0.98
WDR54-201ENST00000348227 WASLO00401 505 aaPredicted RBP21.15■□□□□ 0.98
WDR54-201ENST00000348227 SLAIN2Q9P270 581 aa21.15■□□□□ 0.98
WDR54-201ENST00000348227 PXDNQ92626 1479 aa21.14■□□□□ 0.98
WDR54-201ENST00000348227 DISP3Q9P2K9 1392 aa21.14■□□□□ 0.98
WDR54-201ENST00000348227 ST20-MTHFSA0A0A6YYL1 179 aa21.13■□□□□ 0.97
WDR54-201ENST00000348227 PIP4K2BP78356 416 aa21.13■□□□□ 0.97
WDR54-201ENST00000348227 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
WDR54-201ENST00000348227 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
WDR54-201ENST00000348227 ABCA3Q99758 1704 aa21.12■□□□□ 0.97
WDR54-201ENST00000348227 NUTM2FA1L443 756 aa21.11■□□□□ 0.97
WDR54-201ENST00000348227 ALS2Q96Q42 1657 aa21.11■□□□□ 0.97
WDR54-201ENST00000348227 CRYBG1Q9Y4K1 1723 aa21.1■□□□□ 0.97
WDR54-201ENST00000348227 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
WDR54-201ENST00000348227 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
WDR54-201ENST00000348227 CDK19Q9BWU1 502 aa21.09■□□□□ 0.97
WDR54-201ENST00000348227 COL22A1Q8NFW1 1626 aaPredicted RBP21.07■□□□□ 0.96
WDR54-201ENST00000348227 EVC2Q86UK5 1308 aa21.07■□□□□ 0.96
WDR54-201ENST00000348227 HSPA5P11021 654 aaKnown RBP21.07■□□□□ 0.96
WDR54-201ENST00000348227 MARF1Q9Y4F3 1742 aaKnown RBP21.07■□□□□ 0.96
WDR54-201ENST00000348227 PPIP5K1Q6PFW1 1433 aa21.06■□□□□ 0.96
WDR54-201ENST00000348227 CD163L1Q9NR16 1453 aa21.06■□□□□ 0.96
WDR54-201ENST00000348227 EIF4G2P78344 907 aaKnown RBP eCLIP21.04■□□□□ 0.96
WDR54-201ENST00000348227 CABP2Q9NPB3 220 aa21.04■□□□□ 0.96
WDR54-201ENST00000348227 ATAD2Q6PL18 1390 aa21.04■□□□□ 0.96
WDR54-201ENST00000348227 POLR3AO14802 1390 aaPredicted RBP21.03■□□□□ 0.96
WDR54-201ENST00000348227 NUDT16Q96DE0 195 aaKnown RBP21.03■□□□□ 0.96
WDR54-201ENST00000348227 PIK3C2AO00443 1686 aa21.02■□□□□ 0.96
WDR54-201ENST00000348227 USP54Q70EL1 1684 aa21.02■□□□□ 0.96
WDR54-201ENST00000348227 SRPK2P78362 688 aaKnown RBP21.02■□□□□ 0.96
WDR54-201ENST00000348227 DDX17Q92841 729 aaKnown RBP21.02■□□□□ 0.96
WDR54-201ENST00000348227 MED1Q15648 1581 aaPredicted RBP21.02■□□□□ 0.95
WDR54-201ENST00000348227 HSPA1LP34931 641 aa21.01■□□□□ 0.95
WDR54-201ENST00000348227 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
WDR54-201ENST00000348227 PHRF1Q9P1Y6 1649 aaKnown RBP21■□□□□ 0.95
WDR54-201ENST00000348227 PHF8Q9UPP1 1060 aa21■□□□□ 0.95
WDR54-201ENST00000348227 SOS2Q07890 1332 aaPredicted RBP20.99■□□□□ 0.95
WDR54-201ENST00000348227 CPSF1Q10570 1443 aaKnown RBP20.98■□□□□ 0.95
WDR54-201ENST00000348227 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
WDR54-201ENST00000348227 NPHP3Q7Z494 1330 aa20.98■□□□□ 0.95
WDR54-201ENST00000348227 TNS3Q68CZ2 1445 aa20.97■□□□□ 0.95
WDR54-201ENST00000348227 CCDC61Q9Y6R9 512 aa20.97■□□□□ 0.95
WDR54-201ENST00000348227 USP6P35125 1406 aa20.96■□□□□ 0.95
WDR54-201ENST00000348227 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
WDR54-201ENST00000348227 TMF1P82094 1093 aa20.96■□□□□ 0.95
WDR54-201ENST00000348227 PMFBP1Q8TBY8 1022 aa20.96■□□□□ 0.95
WDR54-201ENST00000348227 PUS7Q96PZ0 661 aaKnown RBP20.95■□□□□ 0.94
WDR54-201ENST00000348227 NINLQ9Y2I6 1382 aa20.95■□□□□ 0.94
WDR54-201ENST00000348227 SSH2Q76I76 1423 aa20.95■□□□□ 0.94
WDR54-201ENST00000348227 PLEKHG3A1L390 1219 aa20.94■□□□□ 0.94
WDR54-201ENST00000348227 FOXO3O43524 673 aa20.94■□□□□ 0.94
WDR54-201ENST00000348227 A0A1W2PP64 1363 aa20.94■□□□□ 0.94
WDR54-201ENST00000348227 XPCQ01831 940 aaPredicted RBP20.93■□□□□ 0.94
WDR54-201ENST00000348227 ACEP12821 1306 aa20.93■□□□□ 0.94
WDR54-201ENST00000348227 PNPLA6Q8IY17 1366 aa20.93■□□□□ 0.94
WDR54-201ENST00000348227 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
WDR54-201ENST00000348227 SBNO1A3KN83 1393 aa20.92■□□□□ 0.94
WDR54-201ENST00000348227 LRP6O75581 1613 aa20.92■□□□□ 0.94
WDR54-201ENST00000348227 ANKRD26Q9UPS8 1709 aa20.92■□□□□ 0.94
WDR54-201ENST00000348227 CABP1Q9NZU7 370 aa20.91■□□□□ 0.94
WDR54-201ENST00000348227 SLC24A1O60721 1099 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms