RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 TECPR2O15040 1411 aa30.32■■■□□ 2.44
TNFRSF10B-202ENST00000347739 ATAD2Q6PL18 1390 aa30.32■■■□□ 2.44
TNFRSF10B-202ENST00000347739 PLEKHG1Q9ULL1 1385 aa30.32■■■□□ 2.44
TNFRSF10B-202ENST00000347739 PPP2R1AP30153 589 aa30.32■■■□□ 2.44
TNFRSF10B-202ENST00000347739 SAFB2Q14151 953 aaKnown RBP eCLIP30.32■■■□□ 2.44
TNFRSF10B-202ENST00000347739 NSD3Q9BZ95 1437 aa30.32■■■□□ 2.44
TNFRSF10B-202ENST00000347739 METP08581 1390 aa30.31■■■□□ 2.44
TNFRSF10B-202ENST00000347739 ANKRD36BQ8N2N9 1353 aa30.31■■■□□ 2.44
TNFRSF10B-202ENST00000347739 CPS1P31327 1500 aa30.3■■■□□ 2.44
TNFRSF10B-202ENST00000347739 ADAMTS13Q76LX8 1427 aa30.28■■■□□ 2.44
TNFRSF10B-202ENST00000347739 CABP2Q9NPB3 220 aa30.28■■■□□ 2.44
TNFRSF10B-202ENST00000347739 FAM135BQ49AJ0 1406 aa30.28■■■□□ 2.44
TNFRSF10B-202ENST00000347739 SIRT1Q96EB6 747 aa30.27■■■□□ 2.44
TNFRSF10B-202ENST00000347739 MINK1Q8N4C8 1332 aaPredicted RBP30.27■■■□□ 2.44
TNFRSF10B-202ENST00000347739 RIMS1Q86UR5 1692 aaKnown RBP30.27■■■□□ 2.44
TNFRSF10B-202ENST00000347739 ADAMTSL3P82987 1691 aa30.26■■■□□ 2.43
TNFRSF10B-202ENST00000347739 MED14O60244 1454 aa30.25■■■□□ 2.43
TNFRSF10B-202ENST00000347739 SRPK2P78362 688 aaKnown RBP30.25■■■□□ 2.43
TNFRSF10B-202ENST00000347739 LTKP29376 864 aa30.23■■■□□ 2.43
TNFRSF10B-202ENST00000347739 BLMP54132 1417 aaPredicted RBP30.22■■■□□ 2.43
TNFRSF10B-202ENST00000347739 NSD2O96028 1365 aa30.21■■■□□ 2.43
TNFRSF10B-202ENST00000347739 PLEKHH1Q9ULM0 1364 aa30.21■■■□□ 2.43
TNFRSF10B-202ENST00000347739 EID1Q9Y6B2 187 aa30.21■■■□□ 2.43
TNFRSF10B-202ENST00000347739 TXNDC2Q86VQ3 553 aa30.2■■■□□ 2.43
TNFRSF10B-202ENST00000347739 CGNL1Q0VF96 1302 aa30.2■■■□□ 2.42
TNFRSF10B-202ENST00000347739 THEMISQ8N1K5 641 aaPredicted RBP30.19■■■□□ 2.42
TNFRSF10B-202ENST00000347739 CEP170BQ9Y4F5 1589 aaPredicted RBP30.19■■■□□ 2.42
TNFRSF10B-202ENST00000347739 WAPLQ7Z5K2 1190 aa30.19■■■□□ 2.42
TNFRSF10B-202ENST00000347739 CDK19Q9BWU1 502 aa30.19■■■□□ 2.42
TNFRSF10B-202ENST00000347739 DIP2AQ14689 1571 aa30.17■■■□□ 2.42
TNFRSF10B-202ENST00000347739 SUPT16HQ9Y5B9 1047 aaKnown RBP30.17■■■□□ 2.42
TNFRSF10B-202ENST00000347739 A0A1W2PP64 1363 aa30.17■■■□□ 2.42
TNFRSF10B-202ENST00000347739 BCANQ96GW7 911 aa30.16■■■□□ 2.42
TNFRSF10B-202ENST00000347739 CD163L1Q9NR16 1453 aa30.16■■■□□ 2.42
TNFRSF10B-202ENST00000347739 ZNF142P52746 1687 aaPredicted RBP30.15■■■□□ 2.42
TNFRSF10B-202ENST00000347739 SMG6Q86US8 1419 aaKnown RBP30.14■■■□□ 2.42
TNFRSF10B-202ENST00000347739 TERF2IPQ9NYB0 399 aa30.13■■■□□ 2.41
TNFRSF10B-202ENST00000347739 PLPPR3Q6T4P5 718 aa30.12■■■□□ 2.41
TNFRSF10B-202ENST00000347739 ADGRB2O60241 1585 aa30.11■■■□□ 2.41
TNFRSF10B-202ENST00000347739 ATP7BP35670 1465 aa30.11■■■□□ 2.41
TNFRSF10B-202ENST00000347739 MORC1Q86VD1 984 aa30.1■■■□□ 2.41
TNFRSF10B-202ENST00000347739 ANKRD26Q9UPS8 1709 aa30.1■■■□□ 2.41
TNFRSF10B-202ENST00000347739 NEFLP07196 543 aa30.1■■■□□ 2.41
TNFRSF10B-202ENST00000347739 POLR3AO14802 1390 aaPredicted RBP30.09■■■□□ 2.41
TNFRSF10B-202ENST00000347739 WASLO00401 505 aaPredicted RBP30.08■■■□□ 2.41
TNFRSF10B-202ENST00000347739 TBX22Q9Y458 520 aa30.08■■■□□ 2.41
TNFRSF10B-202ENST00000347739 WDR43Q15061 677 aaKnown RBP eCLIP30.08■■■□□ 2.41
TNFRSF10B-202ENST00000347739 ROBO2Q9HCK4 1378 aa30.07■■■□□ 2.4
TNFRSF10B-202ENST00000347739 ADAMTS8Q9UP79 889 aa30.07■■■□□ 2.4
TNFRSF10B-202ENST00000347739 HDGFL2Q7Z4V5 671 aaPredicted RBP30.05■■■□□ 2.4
TNFRSF10B-202ENST00000347739 NUDCQ9Y266 331 aa30.05■■■□□ 2.4
TNFRSF10B-202ENST00000347739 PTPRUQ92729 1446 aa30.05■■■□□ 2.4
TNFRSF10B-202ENST00000347739 FKBP8Q14318 412 aa30.03■■■□□ 2.4
TNFRSF10B-202ENST00000347739 CABP1Q9NZU7 370 aa30.03■■■□□ 2.4
TNFRSF10B-202ENST00000347739 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.03■■■□□ 2.4
TNFRSF10B-202ENST00000347739 PTCH1Q13635 1447 aa30.02■■■□□ 2.4
TNFRSF10B-202ENST00000347739 SETD1BQ9UPS6 1966 aaKnown RBP30.02■■■□□ 2.4
TNFRSF10B-202ENST00000347739 KIF20BQ96Q89 1820 aa30.02■■■□□ 2.4
TNFRSF10B-202ENST00000347739 PDE3BQ13370 1112 aa30.01■■■□□ 2.39
TNFRSF10B-202ENST00000347739 SLC26A8Q96RN1 970 aa30.01■■■□□ 2.39
TNFRSF10B-202ENST00000347739 XRN1Q8IZH2 1706 aaKnown RBP30■■■□□ 2.39
TNFRSF10B-202ENST00000347739 SHPRHQ149N8 1683 aa29.99■■■□□ 2.39
TNFRSF10B-202ENST00000347739 CPSF1Q10570 1443 aaKnown RBP29.98■■■□□ 2.39
TNFRSF10B-202ENST00000347739 PPIP5K1Q6PFW1 1433 aa29.98■■■□□ 2.39
TNFRSF10B-202ENST00000347739 CDC42BPGQ6DT37 1551 aa29.98■■■□□ 2.39
TNFRSF10B-202ENST00000347739 PIK3R4Q99570 1358 aa29.96■■■□□ 2.39
TNFRSF10B-202ENST00000347739 FYB1O15117 783 aa29.94■■■□□ 2.38
TNFRSF10B-202ENST00000347739 MON2Q7Z3U7 1717 aa29.94■■■□□ 2.38
TNFRSF10B-202ENST00000347739 TOPAZ1Q8N9V7 1692 aa29.94■■■□□ 2.38
TNFRSF10B-202ENST00000347739 NUDT16Q96DE0 195 aaKnown RBP29.93■■■□□ 2.38
TNFRSF10B-202ENST00000347739 AMOTL2Q9Y2J4 779 aa29.93■■■□□ 2.38
TNFRSF10B-202ENST00000347739 AKAP12Q02952 1782 aa29.93■■■□□ 2.38
TNFRSF10B-202ENST00000347739 CCDC61Q9Y6R9 512 aa29.93■■■□□ 2.38
TNFRSF10B-202ENST00000347739 SENP3-EIF4A1A0A087X0R7 540 aa29.92■■■□□ 2.38
TNFRSF10B-202ENST00000347739 EDC4Q6P2E9 1401 aaKnown RBP29.92■■■□□ 2.38
TNFRSF10B-202ENST00000347739 ITSN1Q15811 1721 aa29.92■■■□□ 2.38
TNFRSF10B-202ENST00000347739 TNNT2P45379 298 aaPredicted RBP29.91■■■□□ 2.38
TNFRSF10B-202ENST00000347739 MTHFSP49914 203 aa29.9■■■□□ 2.38
TNFRSF10B-202ENST00000347739 CFAP53Q96M91 514 aa29.89■■■□□ 2.38
TNFRSF10B-202ENST00000347739 GGNBP2Q9H3C7 697 aa29.89■■■□□ 2.38
TNFRSF10B-202ENST00000347739 ANKLE2Q86XL3 938 aa29.88■■■□□ 2.37
TNFRSF10B-202ENST00000347739 PRR36Q9H6K5 1346 aa29.87■■■□□ 2.37
TNFRSF10B-202ENST00000347739 ERICH6BQ5W0A0 696 aa29.86■■■□□ 2.37
TNFRSF10B-202ENST00000347739 SALL2Q9Y467 1007 aaPredicted RBP29.85■■■□□ 2.37
TNFRSF10B-202ENST00000347739 RNF123Q5XPI4 1314 aa29.84■■■□□ 2.37
TNFRSF10B-202ENST00000347739 NGEFQ8N5V2 710 aa29.83■■■□□ 2.37
TNFRSF10B-202ENST00000347739 CHD2O14647 1828 aaKnown RBP29.83■■■□□ 2.37
TNFRSF10B-202ENST00000347739 ZNF521Q96K83 1311 aa29.82■■■□□ 2.36
TNFRSF10B-202ENST00000347739 ZNF692Q9BU19 519 aaPredicted RBP29.82■■■□□ 2.36
TNFRSF10B-202ENST00000347739 COL3A1P02461 1466 aaPredicted RBP29.81■■■□□ 2.36
TNFRSF10B-202ENST00000347739 NRKQ7Z2Y5 1582 aa29.8■■■□□ 2.36
TNFRSF10B-202ENST00000347739 PLEKHG3A1L390 1219 aa29.79■■■□□ 2.36
TNFRSF10B-202ENST00000347739 NCKAP5LQ9HCH0 1330 aa29.77■■■□□ 2.36
TNFRSF10B-202ENST00000347739 CCDC146Q8IYE0 955 aa29.77■■■□□ 2.36
TNFRSF10B-202ENST00000347739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.76■■■□□ 2.36
TNFRSF10B-202ENST00000347739 PNPLA6Q8IY17 1366 aa29.75■■■□□ 2.35
TNFRSF10B-202ENST00000347739 KCNA6P17658 529 aa29.75■■■□□ 2.35
TNFRSF10B-202ENST00000347739 CDCA7LQ96GN5 454 aa29.75■■■□□ 2.35
TNFRSF10B-202ENST00000347739 NKTRP30414 1462 aaKnown RBP29.75■■■□□ 2.35
TNFRSF10B-202ENST00000347739 APAF1O14727 1248 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms