RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 CYB5RLQ6IPT4 315 aa12.79□□□□□ -0.36
SMG7-201ENST00000347615 PRAM1Q96QH2 718 aa12.79□□□□□ -0.36
SMG7-201ENST00000347615 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
SMG7-201ENST00000347615 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
SMG7-201ENST00000347615 BICD2Q8TD16 824 aa12.79□□□□□ -0.36
SMG7-201ENST00000347615 IGHDP01880 384 aa12.79□□□□□ -0.36
SMG7-201ENST00000347615 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
SMG7-201ENST00000347615 BECN2A8MW95 431 aa12.78□□□□□ -0.36
SMG7-201ENST00000347615 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
SMG7-201ENST00000347615 IFIT2P09913 472 aaKnown RBP12.78□□□□□ -0.36
SMG7-201ENST00000347615 GNAI1P63096 354 aa12.78□□□□□ -0.36
SMG7-201ENST00000347615 TEFQ10587 303 aa12.78□□□□□ -0.36
SMG7-201ENST00000347615 TWISTNBQ3B726 338 aaPredicted RBP12.78□□□□□ -0.36
SMG7-201ENST00000347615 SPC24Q8NBT2 197 aa12.78□□□□□ -0.36
SMG7-201ENST00000347615 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.36
SMG7-201ENST00000347615 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.36
SMG7-201ENST00000347615 EHBP1L1Q8N3D4 1523 aa12.77□□□□□ -0.36
SMG7-201ENST00000347615 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.36
SMG7-201ENST00000347615 NCAPD3P42695 1498 aa12.77□□□□□ -0.36
SMG7-201ENST00000347615 DCTN1Q14203 1278 aa12.77□□□□□ -0.36
SMG7-201ENST00000347615 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.37
SMG7-201ENST00000347615 CABP1Q9NZU7 370 aa12.77□□□□□ -0.37
SMG7-201ENST00000347615 SMC3Q9UQE7 1217 aa12.77□□□□□ -0.37
SMG7-201ENST00000347615 MVPQ14764 893 aaKnown RBP12.77□□□□□ -0.37
SMG7-201ENST00000347615 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.37
SMG7-201ENST00000347615 ANKRD30BQ9BXX2 1392 aa12.77□□□□□ -0.37
SMG7-201ENST00000347615 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
SMG7-201ENST00000347615 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
SMG7-201ENST00000347615 GRPEL1Q9HAV7 217 aa12.77□□□□□ -0.37
SMG7-201ENST00000347615 SMARCA5O60264 1052 aaPredicted RBP12.76□□□□□ -0.37
SMG7-201ENST00000347615 PTPRKQ15262 1439 aa12.76□□□□□ -0.37
SMG7-201ENST00000347615 FBLN1P23142 703 aa12.76□□□□□ -0.37
SMG7-201ENST00000347615 FIBPO43427 364 aa12.75□□□□□ -0.37
SMG7-201ENST00000347615 ZNF771Q7L3S4 317 aaPredicted RBP12.75□□□□□ -0.37
SMG7-201ENST00000347615 RASSF8Q8NHQ8 419 aa12.75□□□□□ -0.37
SMG7-201ENST00000347615 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
SMG7-201ENST00000347615 NUCB2P80303 420 aa12.75□□□□□ -0.37
SMG7-201ENST00000347615 EID1Q9Y6B2 187 aa12.75□□□□□ -0.37
SMG7-201ENST00000347615 MCM4P33991 863 aa12.75□□□□□ -0.37
SMG7-201ENST00000347615 IFT57Q9NWB7 429 aa12.75□□□□□ -0.37
SMG7-201ENST00000347615 TXNDC2Q86VQ3 553 aa12.75□□□□□ -0.37
SMG7-201ENST00000347615 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
SMG7-201ENST00000347615 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
SMG7-201ENST00000347615 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
SMG7-201ENST00000347615 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
SMG7-201ENST00000347615 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
SMG7-201ENST00000347615 TNNQ9UQP3 1299 aa12.74□□□□□ -0.37
SMG7-201ENST00000347615 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
SMG7-201ENST00000347615 TPM4P67936 248 aa12.73□□□□□ -0.37
SMG7-201ENST00000347615 STK3Q13188 491 aa12.73□□□□□ -0.37
SMG7-201ENST00000347615 STK11IPQ8N1F8 1099 aa12.73□□□□□ -0.37
SMG7-201ENST00000347615 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
SMG7-201ENST00000347615 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
SMG7-201ENST00000347615 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
SMG7-201ENST00000347615 NCOA1Q15788 1441 aa12.73□□□□□ -0.37
SMG7-201ENST00000347615 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
SMG7-201ENST00000347615 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
SMG7-201ENST00000347615 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
SMG7-201ENST00000347615 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
SMG7-201ENST00000347615 ZKSCAN1P17029 563 aaPredicted RBP12.72□□□□□ -0.37
SMG7-201ENST00000347615 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.72□□□□□ -0.37
SMG7-201ENST00000347615 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
SMG7-201ENST00000347615 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
SMG7-201ENST00000347615 APPP05067 770 aa12.72□□□□□ -0.37
SMG7-201ENST00000347615 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
SMG7-201ENST00000347615 IL1RAPL2Q9NP60 686 aa12.71□□□□□ -0.37
SMG7-201ENST00000347615 EPRSP07814 1512 aaKnown RBP12.71□□□□□ -0.37
SMG7-201ENST00000347615 UBTFL1P0CB47 393 aaPredicted RBP12.71□□□□□ -0.37
SMG7-201ENST00000347615 NEUROD6Q96NK8 337 aa12.71□□□□□ -0.37
SMG7-201ENST00000347615 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
SMG7-201ENST00000347615 K7ELQ4 463 aaPredicted RBP12.71□□□□□ -0.37
SMG7-201ENST00000347615 ARHGEF11O15085 1522 aa12.71□□□□□ -0.38
SMG7-201ENST00000347615 SIL1Q9H173 461 aa12.71□□□□□ -0.38
SMG7-201ENST00000347615 ATP6V1DQ9Y5K8 247 aa12.71□□□□□ -0.38
SMG7-201ENST00000347615 ABCC5O15440 1437 aa12.71□□□□□ -0.38
SMG7-201ENST00000347615 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
SMG7-201ENST00000347615 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
SMG7-201ENST00000347615 NSD3Q9BZ95 1437 aa12.7□□□□□ -0.38
SMG7-201ENST00000347615 FMNL2Q96PY5 1086 aa12.7□□□□□ -0.38
SMG7-201ENST00000347615 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMG7-201ENST00000347615 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
SMG7-201ENST00000347615 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
SMG7-201ENST00000347615 HOMER1Q86YM7 354 aa12.69□□□□□ -0.38
SMG7-201ENST00000347615 DNAJC2Q99543 621 aaKnown RBP12.69□□□□□ -0.38
SMG7-201ENST00000347615 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
SMG7-201ENST00000347615 EXOC6BQ9Y2D4 811 aa12.68□□□□□ -0.38
SMG7-201ENST00000347615 NLRP6P59044 892 aa12.68□□□□□ -0.38
SMG7-201ENST00000347615 SYCE3A1L190 88 aa12.68□□□□□ -0.38
SMG7-201ENST00000347615 SSFA2P28290 1259 aa12.68□□□□□ -0.38
SMG7-201ENST00000347615 MCM10Q7L590 875 aa12.68□□□□□ -0.38
SMG7-201ENST00000347615 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
SMG7-201ENST00000347615 SASS6Q6UVJ0 657 aa12.67□□□□□ -0.38
SMG7-201ENST00000347615 RUFY2Q8WXA3 655 aa12.67□□□□□ -0.38
SMG7-201ENST00000347615 TSPY26PQ9H489 355 aa12.67□□□□□ -0.38
SMG7-201ENST00000347615 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
SMG7-201ENST00000347615 PSME1Q06323 249 aa12.67□□□□□ -0.38
SMG7-201ENST00000347615 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
SMG7-201ENST00000347615 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
SMG7-201ENST00000347615 RIC3Q7Z5B4 369 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms