RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 NGLY1Q96IV0 654 aa12.16□□□□□ -0.46
RNF41-201ENST00000345093 NRDCO43847 1150 aa12.16□□□□□ -0.46
RNF41-201ENST00000345093 E9PSI1 815 aa12.15□□□□□ -0.46
RNF41-201ENST00000345093 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
RNF41-201ENST00000345093 C9orf78Q9NZ63 289 aaPredicted RBP12.15□□□□□ -0.47
RNF41-201ENST00000345093 NINLQ9Y2I6 1382 aa12.14□□□□□ -0.47
RNF41-201ENST00000345093 A2MP01023 1474 aa12.14□□□□□ -0.47
RNF41-201ENST00000345093 SLC26A8Q96RN1 970 aa12.14□□□□□ -0.47
RNF41-201ENST00000345093 DUOX2Q9NRD8 1548 aa12.14□□□□□ -0.47
RNF41-201ENST00000345093 CABP4P57796 275 aa12.14□□□□□ -0.47
RNF41-201ENST00000345093 PPP1R1BQ9UD71 204 aaPredicted RBP12.13□□□□□ -0.47
RNF41-201ENST00000345093 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
RNF41-201ENST00000345093 NEO1Q92859 1461 aa12.13□□□□□ -0.47
RNF41-201ENST00000345093 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
RNF41-201ENST00000345093 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
RNF41-201ENST00000345093 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
RNF41-201ENST00000345093 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
RNF41-201ENST00000345093 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
RNF41-201ENST00000345093 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
RNF41-201ENST00000345093 NAIPQ13075 1403 aa12.12□□□□□ -0.47
RNF41-201ENST00000345093 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
RNF41-201ENST00000345093 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
RNF41-201ENST00000345093 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
RNF41-201ENST00000345093 CENPQQ7L2Z9 268 aaPredicted RBP12.11□□□□□ -0.47
RNF41-201ENST00000345093 GNL3LQ9NVN8 582 aaKnown RBP12.11□□□□□ -0.47
RNF41-201ENST00000345093 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
RNF41-201ENST00000345093 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
RNF41-201ENST00000345093 ATP10AO60312 1499 aa12.1□□□□□ -0.47
RNF41-201ENST00000345093 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
RNF41-201ENST00000345093 CFAP70Q5T0N1 1121 aa12.1□□□□□ -0.47
RNF41-201ENST00000345093 NBPF8Q3BBV2 869 aa12.1□□□□□ -0.47
RNF41-201ENST00000345093 NBPF14Q5TI25 921 aa12.1□□□□□ -0.47
RNF41-201ENST00000345093 SYNE3Q6ZMZ3 975 aa12.1□□□□□ -0.47
RNF41-201ENST00000345093 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
RNF41-201ENST00000345093 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
RNF41-201ENST00000345093 NCOA1Q15788 1441 aa12.09□□□□□ -0.47
RNF41-201ENST00000345093 RUFY2Q8WXA3 655 aa12.09□□□□□ -0.47
RNF41-201ENST00000345093 TMEM132EQ6IEE7 984 aa12.09□□□□□ -0.47
RNF41-201ENST00000345093 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
RNF41-201ENST00000345093 STARD3NLO95772 234 aa12.09□□□□□ -0.47
RNF41-201ENST00000345093 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
RNF41-201ENST00000345093 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.47
RNF41-201ENST00000345093 RRP1P56182 461 aaKnown RBP12.08□□□□□ -0.47
RNF41-201ENST00000345093 TCEAL9Q9UHQ7 104 aa12.08□□□□□ -0.47
RNF41-201ENST00000345093 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.47
RNF41-201ENST00000345093 A0A087WZG4 1122 aa12.08□□□□□ -0.48
RNF41-201ENST00000345093 CLSTN1O94985 981 aa12.08□□□□□ -0.48
RNF41-201ENST00000345093 DEKP35659 375 aaKnown RBP12.08□□□□□ -0.48
RNF41-201ENST00000345093 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
RNF41-201ENST00000345093 KIF16BQ96L93 1317 aa12.08□□□□□ -0.48
RNF41-201ENST00000345093 ATP10BO94823 1461 aa12.07□□□□□ -0.48
RNF41-201ENST00000345093 TRIM44Q96DX7 344 aaPredicted RBP12.07□□□□□ -0.48
RNF41-201ENST00000345093 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
RNF41-201ENST00000345093 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
RNF41-201ENST00000345093 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
RNF41-201ENST00000345093 CPLX2Q6PUV4 134 aaKnown RBP12.07□□□□□ -0.48
RNF41-201ENST00000345093 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
RNF41-201ENST00000345093 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
RNF41-201ENST00000345093 NUDT16Q96DE0 195 aaKnown RBP12.07□□□□□ -0.48
RNF41-201ENST00000345093 RIPK4P57078 832 aa12.07□□□□□ -0.48
RNF41-201ENST00000345093 TCOF1Q13428 1488 aaKnown RBP12.07□□□□□ -0.48
RNF41-201ENST00000345093 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
RNF41-201ENST00000345093 CDCA7Q9BWT1 371 aaPredicted RBP12.06□□□□□ -0.48
RNF41-201ENST00000345093 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
RNF41-201ENST00000345093 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
RNF41-201ENST00000345093 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
RNF41-201ENST00000345093 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
RNF41-201ENST00000345093 MARCH6O60337 910 aa12.05□□□□□ -0.48
RNF41-201ENST00000345093 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
RNF41-201ENST00000345093 EXOC5O00471 708 aa12.05□□□□□ -0.48
RNF41-201ENST00000345093 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
RNF41-201ENST00000345093 HSP90AB3PQ58FF7 597 aa12.04□□□□□ -0.48
RNF41-201ENST00000345093 NUTM2GQ5VZR2 741 aa12.04□□□□□ -0.48
RNF41-201ENST00000345093 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
RNF41-201ENST00000345093 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
RNF41-201ENST00000345093 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
RNF41-201ENST00000345093 TOMM22Q9NS69 142 aa12.04□□□□□ -0.48
RNF41-201ENST00000345093 CCAR1Q8IX12 1150 aaKnown RBP12.03□□□□□ -0.48
RNF41-201ENST00000345093 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
RNF41-201ENST00000345093 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
RNF41-201ENST00000345093 C19orf44Q9H6X5 657 aa12.03□□□□□ -0.48
RNF41-201ENST00000345093 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
RNF41-201ENST00000345093 ZPR1O75312 459 aa12.03□□□□□ -0.48
RNF41-201ENST00000345093 MTHFSP49914 203 aa12.03□□□□□ -0.48
RNF41-201ENST00000345093 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
RNF41-201ENST00000345093 ERC2O15083 957 aa12.03□□□□□ -0.48
RNF41-201ENST00000345093 CEP170Q5SW79 1584 aa12.02□□□□□ -0.48
RNF41-201ENST00000345093 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.48
RNF41-201ENST00000345093 TRIM6-TRIM34B2RNG4 842 aa12.02□□□□□ -0.48
RNF41-201ENST00000345093 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.48
RNF41-201ENST00000345093 IFIT2P09913 472 aaKnown RBP12.02□□□□□ -0.49
RNF41-201ENST00000345093 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.49
RNF41-201ENST00000345093 GGNBP2Q9H3C7 697 aa12.02□□□□□ -0.49
RNF41-201ENST00000345093 CABP1Q9NZU7 370 aa12.02□□□□□ -0.49
RNF41-201ENST00000345093 ERC1Q8IUD2 1116 aa12.02□□□□□ -0.49
RNF41-201ENST00000345093 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
RNF41-201ENST00000345093 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
RNF41-201ENST00000345093 ABCC5O15440 1437 aa12.01□□□□□ -0.49
RNF41-201ENST00000345093 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
RNF41-201ENST00000345093 NSD2O96028 1365 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms