RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 FBXO31Q5XUX0 539 aaPredicted RBP19.48■□□□□ 0.71
VIPAS39-202ENST00000343765 NOP58Q9Y2X3 529 aaKnown RBP19.48■□□□□ 0.71
VIPAS39-202ENST00000343765 POLR3AO14802 1390 aaPredicted RBP19.48■□□□□ 0.71
VIPAS39-202ENST00000343765 CGNL1Q0VF96 1302 aa19.48■□□□□ 0.71
VIPAS39-202ENST00000343765 PAK3O75914 559 aaPredicted RBP19.47■□□□□ 0.71
VIPAS39-202ENST00000343765 FAM69CQ0P6D2 419 aa19.47■□□□□ 0.71
VIPAS39-202ENST00000343765 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
VIPAS39-202ENST00000343765 BCAR3O75815 825 aa19.46■□□□□ 0.71
VIPAS39-202ENST00000343765 MTHFSP49914 203 aa19.46■□□□□ 0.71
VIPAS39-202ENST00000343765 SLC52A1Q9NWF4 448 aa19.46■□□□□ 0.71
VIPAS39-202ENST00000343765 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
VIPAS39-202ENST00000343765 E9PSI1 815 aa19.46■□□□□ 0.71
VIPAS39-202ENST00000343765 TRMT2AQ8IZ69 625 aaKnown RBP19.46■□□□□ 0.71
VIPAS39-202ENST00000343765 TULP4Q9NRJ4 1543 aa19.46■□□□□ 0.71
VIPAS39-202ENST00000343765 PDE4AP27815 886 aa19.45■□□□□ 0.7
VIPAS39-202ENST00000343765 NKTRP30414 1462 aaKnown RBP19.45■□□□□ 0.7
VIPAS39-202ENST00000343765 SRPK2P78362 688 aaKnown RBP19.45■□□□□ 0.7
VIPAS39-202ENST00000343765 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
VIPAS39-202ENST00000343765 WWC1Q8IX03 1113 aa19.43■□□□□ 0.7
VIPAS39-202ENST00000343765 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
VIPAS39-202ENST00000343765 IPO9Q96P70 1041 aaKnown RBP19.42■□□□□ 0.7
VIPAS39-202ENST00000343765 STAG3Q9UJ98 1225 aa19.42■□□□□ 0.7
VIPAS39-202ENST00000343765 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
VIPAS39-202ENST00000343765 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
VIPAS39-202ENST00000343765 MLECQ14165 292 aa19.41■□□□□ 0.7
VIPAS39-202ENST00000343765 PRAM1Q96QH2 718 aa19.41■□□□□ 0.7
VIPAS39-202ENST00000343765 TCP11L2Q8N4U5 519 aa19.4■□□□□ 0.7
VIPAS39-202ENST00000343765 RUNDC1Q96C34 613 aa19.4■□□□□ 0.7
VIPAS39-202ENST00000343765 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
VIPAS39-202ENST00000343765 POGKQ9P215 609 aa19.4■□□□□ 0.7
VIPAS39-202ENST00000343765 BACH2Q9BYV9 841 aa19.39■□□□□ 0.7
VIPAS39-202ENST00000343765 MS4A1P11836 297 aa19.39■□□□□ 0.69
VIPAS39-202ENST00000343765 SHPRHQ149N8 1683 aa19.39■□□□□ 0.69
VIPAS39-202ENST00000343765 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
VIPAS39-202ENST00000343765 PREX1Q8TCU6 1659 aa19.38■□□□□ 0.69
VIPAS39-202ENST00000343765 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
VIPAS39-202ENST00000343765 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
VIPAS39-202ENST00000343765 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
VIPAS39-202ENST00000343765 U2AF1L5P0DN76 240 aaPredicted RBP19.37■□□□□ 0.69
VIPAS39-202ENST00000343765 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
VIPAS39-202ENST00000343765 U2AF1Q01081 240 aaKnown RBP eCLIP19.37■□□□□ 0.69
VIPAS39-202ENST00000343765 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
VIPAS39-202ENST00000343765 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
VIPAS39-202ENST00000343765 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
VIPAS39-202ENST00000343765 TSPOAP1O95153 1857 aa19.36■□□□□ 0.69
VIPAS39-202ENST00000343765 ZFYVE9O95405 1425 aa19.36■□□□□ 0.69
VIPAS39-202ENST00000343765 NBR1Q14596 966 aa19.36■□□□□ 0.69
VIPAS39-202ENST00000343765 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
VIPAS39-202ENST00000343765 USP32Q8NFA0 1604 aa19.34■□□□□ 0.69
VIPAS39-202ENST00000343765 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
VIPAS39-202ENST00000343765 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.69
VIPAS39-202ENST00000343765 PTPRMP28827 1452 aa19.33■□□□□ 0.68
VIPAS39-202ENST00000343765 PANK1Q8TE04 598 aa19.32■□□□□ 0.68
VIPAS39-202ENST00000343765 NSD2O96028 1365 aa19.32■□□□□ 0.68
VIPAS39-202ENST00000343765 U2SURPO15042 1029 aaKnown RBP19.32■□□□□ 0.68
VIPAS39-202ENST00000343765 BCL2L13Q9BXK5 485 aa19.31■□□□□ 0.68
VIPAS39-202ENST00000343765 IQSEC2Q5JU85 1478 aa19.31■□□□□ 0.68
VIPAS39-202ENST00000343765 RGS3P49796 1198 aa19.31■□□□□ 0.68
VIPAS39-202ENST00000343765 ABCC11Q96J66 1382 aa19.3■□□□□ 0.68
VIPAS39-202ENST00000343765 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
VIPAS39-202ENST00000343765 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
VIPAS39-202ENST00000343765 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
VIPAS39-202ENST00000343765 COG6Q9Y2V7 657 aa19.3■□□□□ 0.68
VIPAS39-202ENST00000343765 DIP2BQ9P265 1576 aa19.3■□□□□ 0.68
VIPAS39-202ENST00000343765 CDK19Q9BWU1 502 aa19.29■□□□□ 0.68
VIPAS39-202ENST00000343765 TERF2IPQ9NYB0 399 aa19.29■□□□□ 0.68
VIPAS39-202ENST00000343765 ATAD2Q6PL18 1390 aa19.29■□□□□ 0.68
VIPAS39-202ENST00000343765 FYB1O15117 783 aa19.27■□□□□ 0.68
VIPAS39-202ENST00000343765 WAPLQ7Z5K2 1190 aa19.27■□□□□ 0.68
VIPAS39-202ENST00000343765 CABP1Q9NZU7 370 aa19.27■□□□□ 0.68
VIPAS39-202ENST00000343765 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
VIPAS39-202ENST00000343765 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.67
VIPAS39-202ENST00000343765 NINLQ9Y2I6 1382 aa19.26■□□□□ 0.67
VIPAS39-202ENST00000343765 RARSP54136 660 aaKnown RBP19.26■□□□□ 0.67
VIPAS39-202ENST00000343765 WDR63Q8IWG1 891 aa19.26■□□□□ 0.67
VIPAS39-202ENST00000343765 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
VIPAS39-202ENST00000343765 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
VIPAS39-202ENST00000343765 IGHDP01880 384 aa19.25■□□□□ 0.67
VIPAS39-202ENST00000343765 PDE3AQ14432 1141 aa19.25■□□□□ 0.67
VIPAS39-202ENST00000343765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.67
VIPAS39-202ENST00000343765 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
VIPAS39-202ENST00000343765 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
VIPAS39-202ENST00000343765 TSR2Q969E8 191 aaKnown RBP19.22■□□□□ 0.67
VIPAS39-202ENST00000343765 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
VIPAS39-202ENST00000343765 PPM1GO15355 546 aaPredicted RBP19.22■□□□□ 0.67
VIPAS39-202ENST00000343765 FBLN1P23142 703 aa19.22■□□□□ 0.67
VIPAS39-202ENST00000343765 CCDC27Q2M243 656 aa19.22■□□□□ 0.67
VIPAS39-202ENST00000343765 MYH16Q9H6N6 1097 aa19.21■□□□□ 0.67
VIPAS39-202ENST00000343765 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
VIPAS39-202ENST00000343765 A2ML1A8K2U0 1454 aa19.21■□□□□ 0.67
VIPAS39-202ENST00000343765 MAPK8IP3Q9UPT6 1336 aa19.21■□□□□ 0.67
VIPAS39-202ENST00000343765 RLBP1P12271 317 aa19.21■□□□□ 0.67
VIPAS39-202ENST00000343765 FAM161AQ3B820 660 aa19.19■□□□□ 0.66
VIPAS39-202ENST00000343765 ARHGEF40Q8TER5 1519 aa19.19■□□□□ 0.66
VIPAS39-202ENST00000343765 C8orf34Q49A92 452 aa19.19■□□□□ 0.66
VIPAS39-202ENST00000343765 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
VIPAS39-202ENST00000343765 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
VIPAS39-202ENST00000343765 TMPOP42166 694 aaKnown RBP19.18■□□□□ 0.66
VIPAS39-202ENST00000343765 PLEKHF1Q96S99 279 aa19.18■□□□□ 0.66
VIPAS39-202ENST00000343765 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms