RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 PIK3R4Q99570 1358 aa6.61□□□□□ -1.35
VAV3-201ENST00000343258 ASXL1Q8IXJ9 1541 aa6.6□□□□□ -1.35
VAV3-201ENST00000343258 DIP2AQ14689 1571 aa6.6□□□□□ -1.35
VAV3-201ENST00000343258 PIK3C2GO75747 1445 aa6.6□□□□□ -1.35
VAV3-201ENST00000343258 WAPLQ7Z5K2 1190 aa6.6□□□□□ -1.35
VAV3-201ENST00000343258 SETD1AO15047 1707 aaKnown RBP6.6□□□□□ -1.35
VAV3-201ENST00000343258 SLAIN2Q9P270 581 aa6.6□□□□□ -1.35
VAV3-201ENST00000343258 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.35
VAV3-201ENST00000343258 MSH6P52701 1360 aa6.59□□□□□ -1.35
VAV3-201ENST00000343258 PLEKHH1Q9ULM0 1364 aa6.59□□□□□ -1.35
VAV3-201ENST00000343258 TSHZ2Q9NRE2 1034 aa6.59□□□□□ -1.35
VAV3-201ENST00000343258 PLEKHG5O94827 1062 aa6.59□□□□□ -1.36
VAV3-201ENST00000343258 DDX17Q92841 729 aaKnown RBP6.59□□□□□ -1.36
VAV3-201ENST00000343258 C19orf44Q9H6X5 657 aa6.59□□□□□ -1.36
VAV3-201ENST00000343258 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.36
VAV3-201ENST00000343258 IFT172Q9UG01 1749 aa6.58□□□□□ -1.36
VAV3-201ENST00000343258 SAFB2Q14151 953 aaKnown RBP eCLIP6.58□□□□□ -1.36
VAV3-201ENST00000343258 NRXN1Q9ULB1 1477 aa6.58□□□□□ -1.36
VAV3-201ENST00000343258 NUTM2FA1L443 756 aa6.58□□□□□ -1.36
VAV3-201ENST00000343258 ATF3P18847 181 aa6.57□□□□□ -1.36
VAV3-201ENST00000343258 L3MBTL2Q969R5 705 aa6.57□□□□□ -1.36
VAV3-201ENST00000343258 MYOM2P54296 1465 aa6.57□□□□□ -1.36
VAV3-201ENST00000343258 NBPF1Q3BBV0 1214 aa6.57□□□□□ -1.36
VAV3-201ENST00000343258 FAM135BQ49AJ0 1406 aa6.57□□□□□ -1.36
VAV3-201ENST00000343258 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.57□□□□□ -1.36
VAV3-201ENST00000343258 YTHDC2Q9H6S0 1430 aaKnown RBP6.56□□□□□ -1.36
VAV3-201ENST00000343258 ADGRL3Q9HAR2 1447 aa6.56□□□□□ -1.36
VAV3-201ENST00000343258 LRPPRCP42704 1394 aaKnown RBP6.56□□□□□ -1.36
VAV3-201ENST00000343258 BRINP3Q76B58 766 aa6.56□□□□□ -1.36
VAV3-201ENST00000343258 CADPS2Q86UW7 1296 aa6.56□□□□□ -1.36
VAV3-201ENST00000343258 CCDC136Q96JN2 1154 aa6.56□□□□□ -1.36
VAV3-201ENST00000343258 TRAK1Q9UPV9 953 aa6.56□□□□□ -1.36
VAV3-201ENST00000343258 PTCH1Q13635 1447 aa6.56□□□□□ -1.36
VAV3-201ENST00000343258 ORAI2Q96SN7 254 aa6.56□□□□□ -1.36
VAV3-201ENST00000343258 SALL2Q9Y467 1007 aaPredicted RBP6.56□□□□□ -1.36
VAV3-201ENST00000343258 ROBO1Q9Y6N7 1651 aa6.55□□□□□ -1.36
VAV3-201ENST00000343258 MST1RQ04912 1400 aa6.55□□□□□ -1.36
VAV3-201ENST00000343258 NCOA3Q9Y6Q9 1424 aa6.55□□□□□ -1.36
VAV3-201ENST00000343258 ABCC11Q96J66 1382 aa6.55□□□□□ -1.36
VAV3-201ENST00000343258 NALCNQ8IZF0 1738 aa6.55□□□□□ -1.36
VAV3-201ENST00000343258 SAMD1Q6SPF0 538 aaPredicted RBP6.55□□□□□ -1.36
VAV3-201ENST00000343258 PRAM1Q96QH2 718 aa6.55□□□□□ -1.36
VAV3-201ENST00000343258 HIRIP3Q9BW71 556 aaPredicted RBP6.55□□□□□ -1.36
VAV3-201ENST00000343258 ADGRB1O14514 1584 aa6.55□□□□□ -1.36
VAV3-201ENST00000343258 TECPR2O15040 1411 aa6.54□□□□□ -1.36
VAV3-201ENST00000343258 PRAG1Q86YV5 1406 aa6.54□□□□□ -1.36
VAV3-201ENST00000343258 DISP3Q9P2K9 1392 aa6.54□□□□□ -1.36
VAV3-201ENST00000343258 C1orf167Q5SNV9 1468 aa6.53□□□□□ -1.36
VAV3-201ENST00000343258 ATXN8OSP0DMR3 200 aa6.53□□□□□ -1.36
VAV3-201ENST00000343258 NBPF8Q3BBV2 869 aa6.53□□□□□ -1.36
VAV3-201ENST00000343258 XPCQ01831 940 aaPredicted RBP6.53□□□□□ -1.36
VAV3-201ENST00000343258 ILDR2Q71H61 639 aa6.53□□□□□ -1.36
VAV3-201ENST00000343258 DCCP43146 1447 aa6.53□□□□□ -1.36
VAV3-201ENST00000343258 MINK1Q8N4C8 1332 aaPredicted RBP6.52□□□□□ -1.37
VAV3-201ENST00000343258 POGKQ9P215 609 aa6.52□□□□□ -1.37
VAV3-201ENST00000343258 ESCO1Q5FWF5 840 aa6.51□□□□□ -1.37
VAV3-201ENST00000343258 FOXO3O43524 673 aa6.51□□□□□ -1.37
VAV3-201ENST00000343258 CAPN15O75808 1086 aa6.51□□□□□ -1.37
VAV3-201ENST00000343258 RGS17Q9UGC6 210 aaPredicted RBP6.5□□□□□ -1.37
VAV3-201ENST00000343258 COL16A1Q07092 1604 aaPredicted RBP6.5□□□□□ -1.37
VAV3-201ENST00000343258 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
VAV3-201ENST00000343258 MED1Q15648 1581 aaPredicted RBP6.5□□□□□ -1.37
VAV3-201ENST00000343258 SIRT1Q96EB6 747 aa6.5□□□□□ -1.37
VAV3-201ENST00000343258 PHLPP1O60346 1717 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 LAMC1P11047 1609 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 PMFBP1Q8TBY8 1022 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 STAC3Q96MF2 364 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 PODXL2Q9NZ53 605 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 SUPT16HQ9Y5B9 1047 aaKnown RBP6.49□□□□□ -1.37
VAV3-201ENST00000343258 CDC42BPGQ6DT37 1551 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 KNDC1Q76NI1 1749 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 NUTM2BA6NNL0 878 aaPredicted RBP6.49□□□□□ -1.37
VAV3-201ENST00000343258 NUTM2EB1AL46 878 aaPredicted RBP6.49□□□□□ -1.37
VAV3-201ENST00000343258 NUTM2AQ8IVF1 878 aaPredicted RBP6.49□□□□□ -1.37
VAV3-201ENST00000343258 PKNOX2Q96KN3 472 aa6.49□□□□□ -1.37
VAV3-201ENST00000343258 LRP6O75581 1613 aa6.48□□□□□ -1.37
VAV3-201ENST00000343258 AHDC1Q5TGY3 1603 aaPredicted RBP6.48□□□□□ -1.37
VAV3-201ENST00000343258 DLC1Q96QB1 1528 aa6.48□□□□□ -1.37
VAV3-201ENST00000343258 TONSLQ96HA7 1378 aa6.48□□□□□ -1.37
VAV3-201ENST00000343258 JCADQ9P266 1359 aa6.48□□□□□ -1.37
VAV3-201ENST00000343258 ABCB7O75027 752 aa6.48□□□□□ -1.37
VAV3-201ENST00000343258 SOS2Q07890 1332 aaPredicted RBP6.48□□□□□ -1.37
VAV3-201ENST00000343258 WASLO00401 505 aaPredicted RBP6.47□□□□□ -1.37
VAV3-201ENST00000343258 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
VAV3-201ENST00000343258 ZNF219Q9P2Y4 722 aaPredicted RBP6.47□□□□□ -1.37
VAV3-201ENST00000343258 ROCK2O75116 1388 aaKnown RBP6.47□□□□□ -1.37
VAV3-201ENST00000343258 PHF8Q9UPP1 1060 aa6.47□□□□□ -1.37
VAV3-201ENST00000343258 NHSL1Q5SYE7 1610 aa6.46□□□□□ -1.37
VAV3-201ENST00000343258 PNPLA6Q8IY17 1366 aa6.46□□□□□ -1.37
VAV3-201ENST00000343258 ARHGEF28Q8N1W1 1705 aaKnown RBP6.46□□□□□ -1.37
VAV3-201ENST00000343258 POTEAQ6S8J7 498 aa6.46□□□□□ -1.38
VAV3-201ENST00000343258 LRRC59Q96AG4 307 aaKnown RBP6.46□□□□□ -1.38
VAV3-201ENST00000343258 CDK19Q9BWU1 502 aa6.46□□□□□ -1.38
VAV3-201ENST00000343258 USP32Q8NFA0 1604 aa6.46□□□□□ -1.38
VAV3-201ENST00000343258 FMN2Q9NZ56 1722 aa6.46□□□□□ -1.38
VAV3-201ENST00000343258 RGPD8O14715 1765 aaPredicted RBP6.46□□□□□ -1.38
VAV3-201ENST00000343258 PXDNQ92626 1479 aa6.46□□□□□ -1.38
VAV3-201ENST00000343258 ADAMTS2O95450 1211 aa6.46□□□□□ -1.38
VAV3-201ENST00000343258 CABP2Q9NPB3 220 aa6.46□□□□□ -1.38
VAV3-201ENST00000343258 CENPJQ9HC77 1338 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms