RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 PDCL3Q9H2J4 239 aa13.01□□□□□ -0.33
CCDC18-201ENST00000343253 CCDC192P0DO97 292 aa13.01□□□□□ -0.33
CCDC18-201ENST00000343253 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
CCDC18-201ENST00000343253 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
CCDC18-201ENST00000343253 PLCD4Q9BRC7 762 aa13.01□□□□□ -0.33
CCDC18-201ENST00000343253 CT47A1Q5JQC4 288 aaPredicted RBP13□□□□□ -0.33
CCDC18-201ENST00000343253 GOLGA6L10A6NI86 522 aa13□□□□□ -0.33
CCDC18-201ENST00000343253 PSMA5P28066 241 aa13□□□□□ -0.33
CCDC18-201ENST00000343253 AMPHP49418 695 aa13□□□□□ -0.33
CCDC18-201ENST00000343253 PIP4K2AP48426 406 aaPredicted RBP13□□□□□ -0.33
CCDC18-201ENST00000343253 FBXW7Q969H0 707 aa13□□□□□ -0.33
CCDC18-201ENST00000343253 SMC2O95347 1197 aa12.99□□□□□ -0.33
CCDC18-201ENST00000343253 GGT6Q6P531 493 aa12.99□□□□□ -0.33
CCDC18-201ENST00000343253 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
CCDC18-201ENST00000343253 C9orf78Q9NZ63 289 aaPredicted RBP12.99□□□□□ -0.33
CCDC18-201ENST00000343253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
CCDC18-201ENST00000343253 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
CCDC18-201ENST00000343253 CALCOCO1Q9P1Z2 691 aa12.99□□□□□ -0.33
CCDC18-201ENST00000343253 USP47Q96K76 1375 aa12.99□□□□□ -0.33
CCDC18-201ENST00000343253 MCM4P33991 863 aa12.98□□□□□ -0.33
CCDC18-201ENST00000343253 ERLIN2O94905 339 aa12.98□□□□□ -0.33
CCDC18-201ENST00000343253 ODF2Q5BJF6 829 aa12.97□□□□□ -0.33
CCDC18-201ENST00000343253 UBE2Q2Q8WVN8 375 aa12.97□□□□□ -0.33
CCDC18-201ENST00000343253 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
CCDC18-201ENST00000343253 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
CCDC18-201ENST00000343253 NEK4P51957 841 aa12.97□□□□□ -0.33
CCDC18-201ENST00000343253 G3BP1Q13283 466 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC18-201ENST00000343253 RALYLQ86SE5 291 aaKnown RBP12.96□□□□□ -0.33
CCDC18-201ENST00000343253 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
CCDC18-201ENST00000343253 ERICH2A1L162 156 aa12.96□□□□□ -0.33
CCDC18-201ENST00000343253 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
CCDC18-201ENST00000343253 SPC24Q8NBT2 197 aa12.96□□□□□ -0.33
CCDC18-201ENST00000343253 DYDC1Q8WWB3 177 aa12.96□□□□□ -0.33
CCDC18-201ENST00000343253 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.34
CCDC18-201ENST00000343253 GIMAP7Q8NHV1 300 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 UBXN4Q92575 508 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 LUC7LQ9NQ29 371 aaKnown RBP12.95□□□□□ -0.34
CCDC18-201ENST00000343253 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 EFCAB2Q5VUJ9 269 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 TTLL5Q6EMB2 1281 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
CCDC18-201ENST00000343253 FIBPO43427 364 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
CCDC18-201ENST00000343253 ZNHIT6Q9NWK9 470 aaKnown RBP12.95□□□□□ -0.34
CCDC18-201ENST00000343253 XBP1P17861 261 aa12.94□□□□□ -0.34
CCDC18-201ENST00000343253 GNAI1P63096 354 aa12.94□□□□□ -0.34
CCDC18-201ENST00000343253 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC18-201ENST00000343253 TEFQ10587 303 aa12.94□□□□□ -0.34
CCDC18-201ENST00000343253 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
CCDC18-201ENST00000343253 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
CCDC18-201ENST00000343253 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
CCDC18-201ENST00000343253 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
CCDC18-201ENST00000343253 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
CCDC18-201ENST00000343253 BRMS1Q9HCU9 246 aa12.93□□□□□ -0.34
CCDC18-201ENST00000343253 NINLQ9Y2I6 1382 aa12.93□□□□□ -0.34
CCDC18-201ENST00000343253 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
CCDC18-201ENST00000343253 EPS15P42566 896 aa12.93□□□□□ -0.34
CCDC18-201ENST00000343253 RIPK4P57078 832 aa12.93□□□□□ -0.34
CCDC18-201ENST00000343253 TMCO3Q6UWJ1 677 aa12.93□□□□□ -0.34
CCDC18-201ENST00000343253 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
CCDC18-201ENST00000343253 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
CCDC18-201ENST00000343253 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
CCDC18-201ENST00000343253 PDIA4P13667 645 aaKnown RBP12.93□□□□□ -0.34
CCDC18-201ENST00000343253 NGDNQ8NEJ9 315 aaKnown RBP12.93□□□□□ -0.34
CCDC18-201ENST00000343253 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
CCDC18-201ENST00000343253 DIAPH1O60610 1272 aaKnown RBP12.92□□□□□ -0.34
CCDC18-201ENST00000343253 FKBP5Q13451 457 aaPredicted RBP12.92□□□□□ -0.34
CCDC18-201ENST00000343253 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 FAM107BQ9H098 131 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
CCDC18-201ENST00000343253 G3V3G9 751 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 AEBP1Q8IUX7 1158 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 TCEAL9Q9UHQ7 104 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 SERPINC1P01008 464 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 PPFIBP1Q86W92 1011 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC18-201ENST00000343253 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
CCDC18-201ENST00000343253 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 KRT85P78386 507 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 PDZRN3Q9UPQ7 1066 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 FHOD3Q2V2M9 1422 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 DHX16O60231 1041 aaKnown RBP12.91□□□□□ -0.34
CCDC18-201ENST00000343253 CNTROBQ8N137 903 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 COG3Q96JB2 828 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 NOL10Q9BSC4 688 aaKnown RBP12.91□□□□□ -0.34
CCDC18-201ENST00000343253 EVC2Q86UK5 1308 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
CCDC18-201ENST00000343253 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
CCDC18-201ENST00000343253 MAGEC2Q9UBF1 373 aaPredicted RBP12.9□□□□□ -0.34
CCDC18-201ENST00000343253 DACH1Q9UI36 760 aa12.9□□□□□ -0.34
CCDC18-201ENST00000343253 TRAK1Q9UPV9 953 aa12.9□□□□□ -0.34
CCDC18-201ENST00000343253 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
CCDC18-201ENST00000343253 NEFHP12036 1026 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms