RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 PTCH1Q13635 1447 aa12.35□□□□□ -0.43
NLRC4-201ENST00000342905 STAC3Q96MF2 364 aa12.35□□□□□ -0.43
NLRC4-201ENST00000342905 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
NLRC4-201ENST00000342905 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
NLRC4-201ENST00000342905 PIP4K2BP78356 416 aa12.33□□□□□ -0.44
NLRC4-201ENST00000342905 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
NLRC4-201ENST00000342905 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
NLRC4-201ENST00000342905 DCCP43146 1447 aa12.32□□□□□ -0.44
NLRC4-201ENST00000342905 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
NLRC4-201ENST00000342905 TECPR2O15040 1411 aa12.31□□□□□ -0.44
NLRC4-201ENST00000342905 ARHGEF28Q8N1W1 1705 aaKnown RBP12.31□□□□□ -0.44
NLRC4-201ENST00000342905 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
NLRC4-201ENST00000342905 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
NLRC4-201ENST00000342905 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
NLRC4-201ENST00000342905 ADGRL3Q9HAR2 1447 aa12.3□□□□□ -0.44
NLRC4-201ENST00000342905 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
NLRC4-201ENST00000342905 ATF3P18847 181 aa12.3□□□□□ -0.44
NLRC4-201ENST00000342905 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
NLRC4-201ENST00000342905 ROBO2Q9HCK4 1378 aa12.3□□□□□ -0.44
NLRC4-201ENST00000342905 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.29□□□□□ -0.44
NLRC4-201ENST00000342905 ABCC11Q96J66 1382 aa12.29□□□□□ -0.44
NLRC4-201ENST00000342905 YTHDC2Q9H6S0 1430 aaKnown RBP12.28□□□□□ -0.44
NLRC4-201ENST00000342905 GPRASP1Q5JY77 1395 aa12.28□□□□□ -0.44
NLRC4-201ENST00000342905 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
NLRC4-201ENST00000342905 KNDC1Q76NI1 1749 aa12.28□□□□□ -0.44
NLRC4-201ENST00000342905 QRICH2Q9H0J4 1663 aa12.27□□□□□ -0.44
NLRC4-201ENST00000342905 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
NLRC4-201ENST00000342905 HSPA1LP34931 641 aa12.27□□□□□ -0.45
NLRC4-201ENST00000342905 CFAP70Q5T0N1 1121 aa12.27□□□□□ -0.45
NLRC4-201ENST00000342905 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.45
NLRC4-201ENST00000342905 NALCNQ8IZF0 1738 aa12.26□□□□□ -0.45
NLRC4-201ENST00000342905 HIRIP3Q9BW71 556 aaPredicted RBP12.26□□□□□ -0.45
NLRC4-201ENST00000342905 ADGRB1O14514 1584 aa12.26□□□□□ -0.45
NLRC4-201ENST00000342905 ROBO1Q9Y6N7 1651 aa12.25□□□□□ -0.45
NLRC4-201ENST00000342905 USP47Q96K76 1375 aa12.25□□□□□ -0.45
NLRC4-201ENST00000342905 HSPA5P11021 654 aaKnown RBP12.25□□□□□ -0.45
NLRC4-201ENST00000342905 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
NLRC4-201ENST00000342905 SIRT1Q96EB6 747 aa12.25□□□□□ -0.45
NLRC4-201ENST00000342905 STK26Q9P289 416 aa12.25□□□□□ -0.45
NLRC4-201ENST00000342905 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
NLRC4-201ENST00000342905 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
NLRC4-201ENST00000342905 MST1RQ04912 1400 aa12.24□□□□□ -0.45
NLRC4-201ENST00000342905 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
NLRC4-201ENST00000342905 CARD11Q9BXL7 1154 aa12.23□□□□□ -0.45
NLRC4-201ENST00000342905 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
NLRC4-201ENST00000342905 PLEKHH1Q9ULM0 1364 aa12.2□□□□□ -0.46
NLRC4-201ENST00000342905 AHDC1Q5TGY3 1603 aaPredicted RBP12.19□□□□□ -0.46
NLRC4-201ENST00000342905 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
NLRC4-201ENST00000342905 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
NLRC4-201ENST00000342905 MYOM1P52179 1685 aa12.19□□□□□ -0.46
NLRC4-201ENST00000342905 PRAM1Q96QH2 718 aa12.18□□□□□ -0.46
NLRC4-201ENST00000342905 POGKQ9P215 609 aa12.18□□□□□ -0.46
NLRC4-201ENST00000342905 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
NLRC4-201ENST00000342905 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
NLRC4-201ENST00000342905 ADGRB2O60241 1585 aa12.17□□□□□ -0.46
NLRC4-201ENST00000342905 COL16A1Q07092 1604 aaPredicted RBP12.16□□□□□ -0.46
NLRC4-201ENST00000342905 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
NLRC4-201ENST00000342905 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.46
NLRC4-201ENST00000342905 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
NLRC4-201ENST00000342905 FMN2Q9NZ56 1722 aa12.14□□□□□ -0.47
NLRC4-201ENST00000342905 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
NLRC4-201ENST00000342905 CCDC7Q96M83 1385 aa12.14□□□□□ -0.47
NLRC4-201ENST00000342905 JCADQ9P266 1359 aa12.14□□□□□ -0.47
NLRC4-201ENST00000342905 C11orf95C9JLR9 678 aaPredicted RBP12.14□□□□□ -0.47
NLRC4-201ENST00000342905 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
NLRC4-201ENST00000342905 POLA2Q14181 598 aa12.14□□□□□ -0.47
NLRC4-201ENST00000342905 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
NLRC4-201ENST00000342905 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
NLRC4-201ENST00000342905 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
NLRC4-201ENST00000342905 ORAI2Q96SN7 254 aa12.12□□□□□ -0.47
NLRC4-201ENST00000342905 KIF7Q2M1P5 1343 aa12.12□□□□□ -0.47
NLRC4-201ENST00000342905 ESCO1Q5FWF5 840 aa12.11□□□□□ -0.47
NLRC4-201ENST00000342905 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
NLRC4-201ENST00000342905 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
NLRC4-201ENST00000342905 DISP3Q9P2K9 1392 aa12.11□□□□□ -0.47
NLRC4-201ENST00000342905 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
NLRC4-201ENST00000342905 TESK2Q96S53 571 aa12.1□□□□□ -0.47
NLRC4-201ENST00000342905 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
NLRC4-201ENST00000342905 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
NLRC4-201ENST00000342905 TULP4Q9NRJ4 1543 aa12.09□□□□□ -0.47
NLRC4-201ENST00000342905 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
NLRC4-201ENST00000342905 WASLO00401 505 aaPredicted RBP12.09□□□□□ -0.47
NLRC4-201ENST00000342905 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
NLRC4-201ENST00000342905 LRRC59Q96AG4 307 aaKnown RBP12.09□□□□□ -0.47
NLRC4-201ENST00000342905 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
NLRC4-201ENST00000342905 SOS2Q07890 1332 aaPredicted RBP12.09□□□□□ -0.47
NLRC4-201ENST00000342905 SPATA31A6Q5VVP1 1343 aa12.09□□□□□ -0.47
NLRC4-201ENST00000342905 CENPJQ9HC77 1338 aaPredicted RBP12.09□□□□□ -0.47
NLRC4-201ENST00000342905 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
NLRC4-201ENST00000342905 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
NLRC4-201ENST00000342905 PXDNQ92626 1479 aa12.07□□□□□ -0.48
NLRC4-201ENST00000342905 USP32Q8NFA0 1604 aa12.07□□□□□ -0.48
NLRC4-201ENST00000342905 FOXO3O43524 673 aa12.06□□□□□ -0.48
NLRC4-201ENST00000342905 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
NLRC4-201ENST00000342905 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
NLRC4-201ENST00000342905 ATP7BP35670 1465 aa12.06□□□□□ -0.48
NLRC4-201ENST00000342905 PNPLA6Q8IY17 1366 aa12.05□□□□□ -0.48
NLRC4-201ENST00000342905 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
NLRC4-201ENST00000342905 KCNA4P22459 653 aa12.05□□□□□ -0.48
NLRC4-201ENST00000342905 TMF1P82094 1093 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms