RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 NSD3Q9BZ95 1437 aa26.93■■□□□ 1.9
RTN1-202ENST00000342503 ABCC11Q96J66 1382 aa26.91■■□□□ 1.9
RTN1-202ENST00000342503 USP32Q8NFA0 1604 aa26.91■■□□□ 1.9
RTN1-202ENST00000342503 METP08581 1390 aa26.91■■□□□ 1.9
RTN1-202ENST00000342503 KNDC1Q76NI1 1749 aa26.91■■□□□ 1.9
RTN1-202ENST00000342503 SUPT16HQ9Y5B9 1047 aaKnown RBP26.9■■□□□ 1.9
RTN1-202ENST00000342503 SRPK2P78362 688 aaKnown RBP26.89■■□□□ 1.9
RTN1-202ENST00000342503 ANKRD36BQ8N2N9 1353 aa26.87■■□□□ 1.89
RTN1-202ENST00000342503 RIMS1Q86UR5 1692 aaKnown RBP26.87■■□□□ 1.89
RTN1-202ENST00000342503 BCANQ96GW7 911 aa26.87■■□□□ 1.89
RTN1-202ENST00000342503 PLEKHH1Q9ULM0 1364 aa26.87■■□□□ 1.89
RTN1-202ENST00000342503 WAPLQ7Z5K2 1190 aa26.86■■□□□ 1.89
RTN1-202ENST00000342503 NINLQ9Y2I6 1382 aa26.85■■□□□ 1.89
RTN1-202ENST00000342503 INSRP06213 1382 aa26.85■■□□□ 1.89
RTN1-202ENST00000342503 ATAD2Q6PL18 1390 aa26.85■■□□□ 1.89
RTN1-202ENST00000342503 PLEKHG1Q9ULL1 1385 aa26.85■■□□□ 1.89
RTN1-202ENST00000342503 LTKP29376 864 aa26.85■■□□□ 1.89
RTN1-202ENST00000342503 SLIT1O75093 1534 aa26.84■■□□□ 1.89
RTN1-202ENST00000342503 SENP3-EIF4A1A0A087X0R7 540 aa26.84■■□□□ 1.89
RTN1-202ENST00000342503 ADAMTS13Q76LX8 1427 aa26.84■■□□□ 1.89
RTN1-202ENST00000342503 CDK19Q9BWU1 502 aa26.83■■□□□ 1.89
RTN1-202ENST00000342503 ARHGAP23Q9P227 1491 aa26.83■■□□□ 1.89
RTN1-202ENST00000342503 BLMP54132 1417 aaPredicted RBP26.82■■□□□ 1.88
RTN1-202ENST00000342503 TXNDC2Q86VQ3 553 aa26.82■■□□□ 1.88
RTN1-202ENST00000342503 CPS1P31327 1500 aa26.81■■□□□ 1.88
RTN1-202ENST00000342503 TECPR2O15040 1411 aa26.81■■□□□ 1.88
RTN1-202ENST00000342503 FKBP8Q14318 412 aa26.81■■□□□ 1.88
RTN1-202ENST00000342503 NEFLP07196 543 aa26.8■■□□□ 1.88
RTN1-202ENST00000342503 SIRT1Q96EB6 747 aa26.79■■□□□ 1.88
RTN1-202ENST00000342503 EID1Q9Y6B2 187 aa26.79■■□□□ 1.88
RTN1-202ENST00000342503 CGNL1Q0VF96 1302 aa26.79■■□□□ 1.88
RTN1-202ENST00000342503 A0A1W2PP64 1363 aa26.78■■□□□ 1.88
RTN1-202ENST00000342503 FAM135BQ49AJ0 1406 aa26.78■■□□□ 1.88
RTN1-202ENST00000342503 SMG6Q86US8 1419 aaKnown RBP26.78■■□□□ 1.88
RTN1-202ENST00000342503 ADAMTSL3P82987 1691 aa26.78■■□□□ 1.88
RTN1-202ENST00000342503 MORC1Q86VD1 984 aa26.77■■□□□ 1.88
RTN1-202ENST00000342503 MED14O60244 1454 aa26.76■■□□□ 1.87
RTN1-202ENST00000342503 CD163L1Q9NR16 1453 aa26.76■■□□□ 1.87
RTN1-202ENST00000342503 THEMISQ8N1K5 641 aaPredicted RBP26.76■■□□□ 1.87
RTN1-202ENST00000342503 ADAMTS8Q9UP79 889 aa26.75■■□□□ 1.87
RTN1-202ENST00000342503 WDR43Q15061 677 aaKnown RBP eCLIP26.74■■□□□ 1.87
RTN1-202ENST00000342503 NSD2O96028 1365 aa26.74■■□□□ 1.87
RTN1-202ENST00000342503 CEP170BQ9Y4F5 1589 aaPredicted RBP26.73■■□□□ 1.87
RTN1-202ENST00000342503 TERF2IPQ9NYB0 399 aa26.73■■□□□ 1.87
RTN1-202ENST00000342503 NUDCQ9Y266 331 aa26.72■■□□□ 1.87
RTN1-202ENST00000342503 WASLO00401 505 aaPredicted RBP26.7■■□□□ 1.86
RTN1-202ENST00000342503 CABP1Q9NZU7 370 aa26.7■■□□□ 1.86
RTN1-202ENST00000342503 ROBO2Q9HCK4 1378 aa26.7■■□□□ 1.86
RTN1-202ENST00000342503 ANKRD26Q9UPS8 1709 aa26.69■■□□□ 1.86
RTN1-202ENST00000342503 SLC26A8Q96RN1 970 aa26.69■■□□□ 1.86
RTN1-202ENST00000342503 SALL2Q9Y467 1007 aaPredicted RBP26.69■■□□□ 1.86
RTN1-202ENST00000342503 TNNT2P45379 298 aaPredicted RBP26.68■■□□□ 1.86
RTN1-202ENST00000342503 HDGFL2Q7Z4V5 671 aaPredicted RBP26.68■■□□□ 1.86
RTN1-202ENST00000342503 POLR3AO14802 1390 aaPredicted RBP26.68■■□□□ 1.86
RTN1-202ENST00000342503 PTPRUQ92729 1446 aa26.67■■□□□ 1.86
RTN1-202ENST00000342503 DIP2AQ14689 1571 aa26.66■■□□□ 1.86
RTN1-202ENST00000342503 KIF20BQ96Q89 1820 aa26.66■■□□□ 1.86
RTN1-202ENST00000342503 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.66■■□□□ 1.86
RTN1-202ENST00000342503 ATP7BP35670 1465 aa26.66■■□□□ 1.86
RTN1-202ENST00000342503 ZNF142P52746 1687 aaPredicted RBP26.65■■□□□ 1.86
RTN1-202ENST00000342503 TBX22Q9Y458 520 aa26.65■■□□□ 1.86
RTN1-202ENST00000342503 SHPRHQ149N8 1683 aa26.64■■□□□ 1.86
RTN1-202ENST00000342503 ADGRB2O60241 1585 aa26.63■■□□□ 1.85
RTN1-202ENST00000342503 PDE3BQ13370 1112 aa26.62■■□□□ 1.85
RTN1-202ENST00000342503 PPIP5K1Q6PFW1 1433 aa26.61■■□□□ 1.85
RTN1-202ENST00000342503 GGNBP2Q9H3C7 697 aa26.6■■□□□ 1.85
RTN1-202ENST00000342503 FYB1O15117 783 aa26.59■■□□□ 1.85
RTN1-202ENST00000342503 NUDT16Q96DE0 195 aaKnown RBP26.59■■□□□ 1.85
RTN1-202ENST00000342503 AMOTL2Q9Y2J4 779 aa26.59■■□□□ 1.85
RTN1-202ENST00000342503 MTHFSP49914 203 aa26.58■■□□□ 1.85
RTN1-202ENST00000342503 IRX6P78412 446 aaPredicted RBP26.58■■□□□ 1.85
RTN1-202ENST00000342503 SETD1BQ9UPS6 1966 aaKnown RBP26.57■■□□□ 1.84
RTN1-202ENST00000342503 CDC42BPGQ6DT37 1551 aa26.57■■□□□ 1.84
RTN1-202ENST00000342503 CPSF1Q10570 1443 aaKnown RBP26.56■■□□□ 1.84
RTN1-202ENST00000342503 AKAP12Q02952 1782 aa26.56■■□□□ 1.84
RTN1-202ENST00000342503 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
RTN1-202ENST00000342503 XRN1Q8IZH2 1706 aaKnown RBP26.56■■□□□ 1.84
RTN1-202ENST00000342503 CCDC146Q8IYE0 955 aa26.55■■□□□ 1.84
RTN1-202ENST00000342503 PTCH1Q13635 1447 aa26.55■■□□□ 1.84
RTN1-202ENST00000342503 MON2Q7Z3U7 1717 aa26.55■■□□□ 1.84
RTN1-202ENST00000342503 CCDC61Q9Y6R9 512 aa26.54■■□□□ 1.84
RTN1-202ENST00000342503 CFAP53Q96M91 514 aa26.53■■□□□ 1.84
RTN1-202ENST00000342503 PRR36Q9H6K5 1346 aa26.53■■□□□ 1.84
RTN1-202ENST00000342503 NCKAP5LQ9HCH0 1330 aa26.53■■□□□ 1.84
RTN1-202ENST00000342503 TOPAZ1Q8N9V7 1692 aa26.53■■□□□ 1.84
RTN1-202ENST00000342503 CDCA7LQ96GN5 454 aa26.53■■□□□ 1.84
RTN1-202ENST00000342503 EDC4Q6P2E9 1401 aaKnown RBP26.51■■□□□ 1.83
RTN1-202ENST00000342503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.51■■□□□ 1.83
RTN1-202ENST00000342503 ANKLE2Q86XL3 938 aa26.49■■□□□ 1.83
RTN1-202ENST00000342503 RNF123Q5XPI4 1314 aa26.49■■□□□ 1.83
RTN1-202ENST00000342503 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
RTN1-202ENST00000342503 APAF1O14727 1248 aa26.47■■□□□ 1.83
RTN1-202ENST00000342503 ERICH6BQ5W0A0 696 aa26.47■■□□□ 1.83
RTN1-202ENST00000342503 ZNF521Q96K83 1311 aa26.47■■□□□ 1.83
RTN1-202ENST00000342503 CHD2O14647 1828 aaKnown RBP26.44■■□□□ 1.82
RTN1-202ENST00000342503 COL3A1P02461 1466 aaPredicted RBP26.44■■□□□ 1.82
RTN1-202ENST00000342503 ZNF692Q9BU19 519 aaPredicted RBP26.42■■□□□ 1.82
RTN1-202ENST00000342503 NUTM2FA1L443 756 aa26.42■■□□□ 1.82
RTN1-202ENST00000342503 KCNA6P17658 529 aa26.42■■□□□ 1.82
RTN1-202ENST00000342503 NME9Q86XW9 330 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms