RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 CPLX1O14810 134 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
LMO7-202ENST00000341547 TRIM5Q9C035 493 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 CUX1P39880 1505 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 RUFY2Q8WXA3 655 aa8.98□□□□□ -0.97
LMO7-202ENST00000341547 CWC22Q9HCG8 908 aaKnown RBP8.98□□□□□ -0.97
LMO7-202ENST00000341547 TERF2IPQ9NYB0 399 aa8.98□□□□□ -0.97
LMO7-202ENST00000341547 RAD21O60216 631 aa8.98□□□□□ -0.97
LMO7-202ENST00000341547 CAGE1Q8TC20 777 aa8.98□□□□□ -0.97
LMO7-202ENST00000341547 DHX8Q14562 1220 aaKnown RBP8.98□□□□□ -0.97
LMO7-202ENST00000341547 TRAK1Q9UPV9 953 aa8.98□□□□□ -0.97
LMO7-202ENST00000341547 C11orf95C9JLR9 678 aaPredicted RBP8.97□□□□□ -0.97
LMO7-202ENST00000341547 TMX4Q9H1E5 349 aaPredicted RBP8.97□□□□□ -0.97
LMO7-202ENST00000341547 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
LMO7-202ENST00000341547 RABEP1Q15276 862 aa8.97□□□□□ -0.97
LMO7-202ENST00000341547 FMNL2Q96PY5 1086 aa8.97□□□□□ -0.97
LMO7-202ENST00000341547 CDR1P51861 262 aa8.97□□□□□ -0.97
LMO7-202ENST00000341547 AXDND1Q5T1B0 1012 aaPredicted RBP8.96□□□□□ -0.97
LMO7-202ENST00000341547 CCDC73Q6ZRK6 1079 aa8.96□□□□□ -0.97
LMO7-202ENST00000341547 KDM4AO75164 1064 aa8.96□□□□□ -0.97
LMO7-202ENST00000341547 SDF4Q9BRK5 362 aa8.96□□□□□ -0.97
LMO7-202ENST00000341547 C9orf78Q9NZ63 289 aaPredicted RBP8.96□□□□□ -0.97
LMO7-202ENST00000341547 FHOD3Q2V2M9 1422 aa8.96□□□□□ -0.97
LMO7-202ENST00000341547 RUSC2Q8N2Y8 1516 aa8.96□□□□□ -0.97
LMO7-202ENST00000341547 PRPF40AO75400 957 aaKnown RBP8.96□□□□□ -0.98
LMO7-202ENST00000341547 EIF2S2P20042 333 aaKnown RBP8.96□□□□□ -0.98
LMO7-202ENST00000341547 GTF2E1P29083 439 aaPredicted RBP8.96□□□□□ -0.98
LMO7-202ENST00000341547 ERICH4A6NGS2 130 aa8.96□□□□□ -0.98
LMO7-202ENST00000341547 NAT10Q9H0A0 1025 aaKnown RBP8.96□□□□□ -0.98
LMO7-202ENST00000341547 PANK1Q8TE04 598 aa8.96□□□□□ -0.98
LMO7-202ENST00000341547 MCM2P49736 904 aa8.95□□□□□ -0.98
LMO7-202ENST00000341547 CCDC112Q8NEF3 446 aa8.95□□□□□ -0.98
LMO7-202ENST00000341547 CLCN1P35523 988 aa8.95□□□□□ -0.98
LMO7-202ENST00000341547 PDE3AQ14432 1141 aa8.95□□□□□ -0.98
LMO7-202ENST00000341547 SMC2O95347 1197 aa8.95□□□□□ -0.98
LMO7-202ENST00000341547 CCDC47Q96A33 483 aaKnown RBP8.95□□□□□ -0.98
LMO7-202ENST00000341547 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
LMO7-202ENST00000341547 PDZRN3Q9UPQ7 1066 aa8.95□□□□□ -0.98
LMO7-202ENST00000341547 IFIT2P09913 472 aaKnown RBP8.95□□□□□ -0.98
LMO7-202ENST00000341547 NGDNQ8NEJ9 315 aaKnown RBP8.95□□□□□ -0.98
LMO7-202ENST00000341547 K7ELQ4 463 aaPredicted RBP8.95□□□□□ -0.98
LMO7-202ENST00000341547 DCTN1Q14203 1278 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 FAM177A1Q8N128 213 aaPredicted RBP8.94□□□□□ -0.98
LMO7-202ENST00000341547 PRDM10Q9NQV6 1147 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 CCDC144AA2RUR9 1427 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 MCM5P33992 734 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 BRPF1P55201 1214 aaPredicted RBP8.94□□□□□ -0.98
LMO7-202ENST00000341547 DYNC1I1O14576 645 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 TRDNQ13061 729 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 CT47A1Q5JQC4 288 aaPredicted RBP8.94□□□□□ -0.98
LMO7-202ENST00000341547 ZFYVE27Q5T4F4 411 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 OLFM4Q6UX06 510 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 RUNDC1Q96C34 613 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 API5Q9BZZ5 524 aaKnown RBP8.94□□□□□ -0.98
LMO7-202ENST00000341547 CALCOCO1Q9P1Z2 691 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 USP8P40818 1118 aa8.94□□□□□ -0.98
LMO7-202ENST00000341547 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.94□□□□□ -0.98
LMO7-202ENST00000341547 CT47B1P0C2W7 299 aaPredicted RBP8.93□□□□□ -0.98
LMO7-202ENST00000341547 ODF2Q5BJF6 829 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 SMARCA2P51531 1590 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 TCEAL9Q9UHQ7 104 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 FGD6Q6ZV73 1430 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 HSP90AB2PQ58FF8 381 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 EPS15P42566 896 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 LRRC9Q6ZRR7 1453 aa8.93□□□□□ -0.98
LMO7-202ENST00000341547 OFD1O75665 1012 aa8.92□□□□□ -0.98
LMO7-202ENST00000341547 CEBPZQ03701 1054 aaKnown RBP8.92□□□□□ -0.98
LMO7-202ENST00000341547 CGNQ9P2M7 1197 aaKnown RBP8.92□□□□□ -0.98
LMO7-202ENST00000341547 DHX16O60231 1041 aaKnown RBP8.92□□□□□ -0.98
LMO7-202ENST00000341547 CBX1P83916 185 aa8.92□□□□□ -0.98
LMO7-202ENST00000341547 LRRFIP1Q32MZ4 808 aaKnown RBP8.92□□□□□ -0.98
LMO7-202ENST00000341547 DEF6Q9H4E7 631 aa8.92□□□□□ -0.98
LMO7-202ENST00000341547 RIPK4P57078 832 aa8.91□□□□□ -0.98
LMO7-202ENST00000341547 FIBPO43427 364 aa8.91□□□□□ -0.98
LMO7-202ENST00000341547 HNRNPMP52272 730 aaKnown RBP eCLIP8.91□□□□□ -0.987e-6■□□□□ 9.7
LMO7-202ENST00000341547 CENPHQ9H3R5 247 aa8.91□□□□□ -0.98
LMO7-202ENST00000341547 PLEKHH2Q8IVE3 1493 aa8.91□□□□□ -0.98
LMO7-202ENST00000341547 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.91□□□□□ -0.98
LMO7-202ENST00000341547 WASHC2CQ9Y4E1 1318 aa8.91□□□□□ -0.98
LMO7-202ENST00000341547 SAFBQ15424 915 aaKnown RBP eCLIP8.9□□□□□ -0.98
LMO7-202ENST00000341547 CCDC192P0DO97 292 aa8.9□□□□□ -0.98
LMO7-202ENST00000341547 CDCA7LQ96GN5 454 aa8.9□□□□□ -0.98
LMO7-202ENST00000341547 KINO60870 393 aaKnown RBP8.9□□□□□ -0.98
LMO7-202ENST00000341547 KIAA0754O94854 1291 aa8.9□□□□□ -0.98
LMO7-202ENST00000341547 NEFHP12036 1026 aa8.9□□□□□ -0.98
LMO7-202ENST00000341547 NEK4P51957 841 aa8.9□□□□□ -0.98
LMO7-202ENST00000341547 EIF3JO75822 258 aaKnown RBP8.9□□□□□ -0.98
LMO7-202ENST00000341547 GCC1Q96CN9 775 aa8.9□□□□□ -0.99
LMO7-202ENST00000341547 ERICH2A1L162 156 aa8.9□□□□□ -0.99
LMO7-202ENST00000341547 FKBP5Q13451 457 aaPredicted RBP8.9□□□□□ -0.99
LMO7-202ENST00000341547 MYOM3Q5VTT5 1437 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 NEXNQ0ZGT2 675 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
LMO7-202ENST00000341547 GTPBP4Q9BZE4 634 aaKnown RBP8.89□□□□□ -0.99
LMO7-202ENST00000341547 KIF3BO15066 747 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 ATP2B1P20020 1258 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 TEFQ10587 303 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 FAM193AP78312 1265 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 G3BP1Q13283 466 aaKnown RBP eCLIP8.89□□□□□ -0.991e-6■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms