RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 EID1Q9Y6B2 187 aa20.09■□□□□ 0.81
TPM3-208ENST00000341485 THEMISQ8N1K5 641 aaPredicted RBP20.08■□□□□ 0.81
TPM3-208ENST00000341485 TXNDC2Q86VQ3 553 aa20.07■□□□□ 0.8
TPM3-208ENST00000341485 POGKQ9P215 609 aa20.07■□□□□ 0.8
TPM3-208ENST00000341485 SAFB2Q14151 953 aaKnown RBP eCLIP20.07■□□□□ 0.8
TPM3-208ENST00000341485 MYOM1P52179 1685 aa20.07■□□□□ 0.8
TPM3-208ENST00000341485 SLIT1O75093 1534 aa20.06■□□□□ 0.8
TPM3-208ENST00000341485 CEP170BQ9Y4F5 1589 aaPredicted RBP20.05■□□□□ 0.8
TPM3-208ENST00000341485 INSRP06213 1382 aa20.05■□□□□ 0.8
TPM3-208ENST00000341485 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
TPM3-208ENST00000341485 EVC2Q86UK5 1308 aa20.05■□□□□ 0.8
TPM3-208ENST00000341485 PRAM1Q96QH2 718 aa20.05■□□□□ 0.8
TPM3-208ENST00000341485 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
TPM3-208ENST00000341485 LTKP29376 864 aa20.04■□□□□ 0.8
TPM3-208ENST00000341485 ARHGAP23Q9P227 1491 aa20.04■□□□□ 0.8
TPM3-208ENST00000341485 METP08581 1390 aa20.03■□□□□ 0.8
TPM3-208ENST00000341485 MYT1Q01538 1121 aa20.03■□□□□ 0.8
TPM3-208ENST00000341485 DLC1Q96QB1 1528 aa20.03■□□□□ 0.8
TPM3-208ENST00000341485 KNSTRNQ9Y448 316 aa20.01■□□□□ 0.79
TPM3-208ENST00000341485 SALL2Q9Y467 1007 aaPredicted RBP20.01■□□□□ 0.79
TPM3-208ENST00000341485 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
TPM3-208ENST00000341485 ABCC11Q96J66 1382 aa20■□□□□ 0.79
TPM3-208ENST00000341485 AMER1Q5JTC6 1135 aaPredicted RBP20■□□□□ 0.79
TPM3-208ENST00000341485 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
TPM3-208ENST00000341485 PDE3BQ13370 1112 aa19.99■□□□□ 0.79
TPM3-208ENST00000341485 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
TPM3-208ENST00000341485 PUS7Q96PZ0 661 aaKnown RBP19.98■□□□□ 0.79
TPM3-208ENST00000341485 ZNF142P52746 1687 aaPredicted RBP19.98■□□□□ 0.79
TPM3-208ENST00000341485 KNDC1Q76NI1 1749 aa19.97■□□□□ 0.79
TPM3-208ENST00000341485 PPP2R1AP30153 589 aa19.96■□□□□ 0.79
TPM3-208ENST00000341485 SRPK2P78362 688 aaKnown RBP19.96■□□□□ 0.79
TPM3-208ENST00000341485 CABP2Q9NPB3 220 aa19.96■□□□□ 0.79
TPM3-208ENST00000341485 WAPLQ7Z5K2 1190 aa19.96■□□□□ 0.79
TPM3-208ENST00000341485 SETD1BQ9UPS6 1966 aaKnown RBP19.96■□□□□ 0.79
TPM3-208ENST00000341485 RRP1P56182 461 aaKnown RBP19.95■□□□□ 0.78
TPM3-208ENST00000341485 SLC26A8Q96RN1 970 aa19.95■□□□□ 0.78
TPM3-208ENST00000341485 RCAN3Q9UKA8 241 aa19.95■□□□□ 0.78
TPM3-208ENST00000341485 PLEKHH1Q9ULM0 1364 aa19.94■□□□□ 0.78
TPM3-208ENST00000341485 CDCA7LQ96GN5 454 aa19.94■□□□□ 0.78
TPM3-208ENST00000341485 NPC1L1Q9UHC9 1359 aa19.94■□□□□ 0.78
TPM3-208ENST00000341485 CPS1P31327 1500 aa19.93■□□□□ 0.78
TPM3-208ENST00000341485 TECPR2O15040 1411 aa19.93■□□□□ 0.78
TPM3-208ENST00000341485 SLC12A5Q9H2X9 1139 aa19.93■□□□□ 0.78
TPM3-208ENST00000341485 MED14O60244 1454 aa19.92■□□□□ 0.78
TPM3-208ENST00000341485 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
TPM3-208ENST00000341485 CCDC136Q96JN2 1154 aa19.92■□□□□ 0.78
TPM3-208ENST00000341485 ANP32EQ9BTT0 268 aa19.92■□□□□ 0.78
TPM3-208ENST00000341485 FAM135BQ49AJ0 1406 aa19.92■□□□□ 0.78
TPM3-208ENST00000341485 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
TPM3-208ENST00000341485 ADAMTS8Q9UP79 889 aa19.91■□□□□ 0.78
TPM3-208ENST00000341485 TBX22Q9Y458 520 aa19.91■□□□□ 0.78
TPM3-208ENST00000341485 ATAD2Q6PL18 1390 aa19.91■□□□□ 0.78
TPM3-208ENST00000341485 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
TPM3-208ENST00000341485 ANKLE2Q86XL3 938 aa19.9■□□□□ 0.78
TPM3-208ENST00000341485 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
TPM3-208ENST00000341485 NINLQ9Y2I6 1382 aa19.89■□□□□ 0.77
TPM3-208ENST00000341485 CARD14Q9BXL6 1004 aa19.88■□□□□ 0.77
TPM3-208ENST00000341485 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
TPM3-208ENST00000341485 ROBO2Q9HCK4 1378 aa19.87■□□□□ 0.77
TPM3-208ENST00000341485 MSH5O43196 834 aa19.87■□□□□ 0.77
TPM3-208ENST00000341485 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
TPM3-208ENST00000341485 ANKRD36BQ8N2N9 1353 aa19.86■□□□□ 0.77
TPM3-208ENST00000341485 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
TPM3-208ENST00000341485 AMOTL2Q9Y2J4 779 aa19.85■□□□□ 0.77
TPM3-208ENST00000341485 EXOC6Q8TAG9 804 aa19.85■□□□□ 0.77
TPM3-208ENST00000341485 WASLO00401 505 aaPredicted RBP19.83■□□□□ 0.77
TPM3-208ENST00000341485 TERF2IPQ9NYB0 399 aa19.82■□□□□ 0.76
TPM3-208ENST00000341485 A0A1W2PP64 1363 aa19.81■□□□□ 0.76
TPM3-208ENST00000341485 USP32Q8NFA0 1604 aa19.81■□□□□ 0.76
TPM3-208ENST00000341485 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
TPM3-208ENST00000341485 CGNL1Q0VF96 1302 aa19.8■□□□□ 0.76
TPM3-208ENST00000341485 HDGFL2Q7Z4V5 671 aaPredicted RBP19.8■□□□□ 0.76
TPM3-208ENST00000341485 PTCH1Q13635 1447 aa19.8■□□□□ 0.76
TPM3-208ENST00000341485 CABP1Q9NZU7 370 aa19.79■□□□□ 0.76
TPM3-208ENST00000341485 ZNF521Q96K83 1311 aa19.79■□□□□ 0.76
TPM3-208ENST00000341485 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.78■□□□□ 0.76
TPM3-208ENST00000341485 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
TPM3-208ENST00000341485 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
TPM3-208ENST00000341485 NPHP4O75161 1426 aaPredicted RBP19.77■□□□□ 0.76
TPM3-208ENST00000341485 PLIN1O60240 522 aa19.76■□□□□ 0.75
TPM3-208ENST00000341485 MORC1Q86VD1 984 aa19.76■□□□□ 0.75
TPM3-208ENST00000341485 NUDT16Q96DE0 195 aaKnown RBP19.75■□□□□ 0.75
TPM3-208ENST00000341485 CD163L1Q9NR16 1453 aa19.75■□□□□ 0.75
TPM3-208ENST00000341485 NSD2O96028 1365 aa19.75■□□□□ 0.75
TPM3-208ENST00000341485 PPIP5K1Q6PFW1 1433 aa19.75■□□□□ 0.75
TPM3-208ENST00000341485 ATP7BP35670 1465 aa19.75■□□□□ 0.75
TPM3-208ENST00000341485 DUSP27Q5VZP5 1158 aa19.74■□□□□ 0.75
TPM3-208ENST00000341485 NCKAP5LQ9HCH0 1330 aa19.74■□□□□ 0.75
TPM3-208ENST00000341485 KCNA6P17658 529 aa19.74■□□□□ 0.75
TPM3-208ENST00000341485 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
TPM3-208ENST00000341485 CHD2O14647 1828 aaKnown RBP19.73■□□□□ 0.75
TPM3-208ENST00000341485 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
TPM3-208ENST00000341485 GOLGA2Q08379 1002 aa19.72■□□□□ 0.75
TPM3-208ENST00000341485 CRBNQ96SW2 442 aa19.71■□□□□ 0.75
TPM3-208ENST00000341485 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
TPM3-208ENST00000341485 POLR3AO14802 1390 aaPredicted RBP19.69■□□□□ 0.74
TPM3-208ENST00000341485 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
TPM3-208ENST00000341485 KDM4FA0A1W2PPD8 638 aa19.69■□□□□ 0.74
TPM3-208ENST00000341485 APAF1O14727 1248 aa19.69■□□□□ 0.74
TPM3-208ENST00000341485 SLFN5Q08AF3 891 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms