RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
ATP2B4-201ENST00000341360 IFFO2Q5TF58 517 aa9.42□□□□□ -0.9
ATP2B4-201ENST00000341360 VPS37DQ86XT2 251 aa9.42□□□□□ -0.9
ATP2B4-201ENST00000341360 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
ATP2B4-201ENST00000341360 KIAA1107Q9UPP5 1409 aa9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 TSPYL4Q9UJ04 414 aa9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 NLRP6P59044 892 aa9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 FKBP5Q13451 457 aaPredicted RBP9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 ANKRD20A12PQ8NF67 263 aa9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 RBM33Q96EV2 1170 aaKnown RBP9.41□□□□□ -0.9
ATP2B4-201ENST00000341360 APAF1O14727 1248 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 TCEAL9Q9UHQ7 104 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 ERICH2A1L162 156 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 ANKRD45Q5TZF3 282 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 EXOC6Q8TAG9 804 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 ZNF428Q96B54 188 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 NLRP2Q9NX02 1062 aa9.4□□□□□ -0.9
ATP2B4-201ENST00000341360 HIP1O00291 1037 aa9.4□□□□□ -0.91
ATP2B4-201ENST00000341360 CCDC30Q5VVM6 783 aa9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 NOC3LQ8WTT2 800 aaKnown RBP9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 SNAPC4Q5SXM2 1469 aa9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 MAGI1Q96QZ7 1491 aaPredicted RBP9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 CPLX1O14810 134 aa9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 GOLGA6L3A6NEY3 463 aa9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 ERC1Q8IUD2 1116 aa9.39□□□□□ -0.91
ATP2B4-201ENST00000341360 INTS3Q68E01 1043 aaKnown RBP9.38□□□□□ -0.91
ATP2B4-201ENST00000341360 TATP17735 454 aaPredicted RBP9.38□□□□□ -0.91
ATP2B4-201ENST00000341360 RILPL2Q969X0 211 aa9.38□□□□□ -0.91
ATP2B4-201ENST00000341360 AFAP1Q8N556 730 aa9.38□□□□□ -0.91
ATP2B4-201ENST00000341360 CCDC141Q6ZP82 1450 aa9.38□□□□□ -0.91
ATP2B4-201ENST00000341360 EIF2S2P20042 333 aaKnown RBP9.38□□□□□ -0.91
ATP2B4-201ENST00000341360 SAFBQ15424 915 aaKnown RBP eCLIP9.38□□□□□ -0.91
ATP2B4-201ENST00000341360 TPD52L1Q16890 204 aaPredicted RBP9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 RRP7AQ9Y3A4 280 aaKnown RBP9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 RPRD2Q5VT52 1461 aaKnown RBP9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 XBP1P17861 261 aa9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 VPS53Q5VIR6 699 aa9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 GOLGA6L1Q8N7Z2 621 aa9.37□□□□□ -0.91
ATP2B4-201ENST00000341360 GOLGA6L19H0YKK7 550 aa9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 IPO7O95373 1038 aaKnown RBP9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 UBTFL1P0CB47 393 aaPredicted RBP9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 BACH2Q9BYV9 841 aa9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 KIF6Q6ZMV9 814 aa9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 RALYLQ86SE5 291 aaKnown RBP9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 TBC1D2BQ9UPU7 963 aa9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 SPG7Q9UQ90 795 aa9.36□□□□□ -0.91
ATP2B4-201ENST00000341360 PSMA5P28066 241 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 CCDC70Q6NSX1 233 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 ABTB2Q8N961 1025 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 SLKQ9H2G2 1235 aaPredicted RBP9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 BRMS1Q9HCU9 246 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 ZNF644Q9H582 1327 aaPredicted RBP9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 NUCB2P80303 420 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 BECN2A8MW95 431 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 ELL2O00472 640 aaPredicted RBP9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 SLC3A2P08195 630 aaKnown RBP9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 SART3Q15020 963 aaKnown RBP9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 CLASRPQ8N2M8 674 aaKnown RBP9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 MCM2P49736 904 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 NBPF8Q3BBV2 869 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 CCDC184Q52MB2 194 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
ATP2B4-201ENST00000341360 GNL3LQ9NVN8 582 aaKnown RBP9.34□□□□□ -0.91
ATP2B4-201ENST00000341360 IQGAP2Q13576 1575 aa9.34□□□□□ -0.91
ATP2B4-201ENST00000341360 RTEL1-TNFRSF6BF6WH68 1400 aa9.34□□□□□ -0.91
ATP2B4-201ENST00000341360 APPP05067 770 aa9.34□□□□□ -0.91
ATP2B4-201ENST00000341360 PDIA4P13667 645 aaKnown RBP9.34□□□□□ -0.91
ATP2B4-201ENST00000341360 EPRSP07814 1512 aaKnown RBP9.34□□□□□ -0.92
ATP2B4-201ENST00000341360 TCOF1Q13428 1488 aaKnown RBP9.33□□□□□ -0.92
ATP2B4-201ENST00000341360 ESCO1Q5FWF5 840 aa9.33□□□□□ -0.92
ATP2B4-201ENST00000341360 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
ATP2B4-201ENST00000341360 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
ATP2B4-201ENST00000341360 CCDC43Q96MW1 224 aaKnown RBP9.33□□□□□ -0.92
ATP2B4-201ENST00000341360 UGGT2Q9NYU1 1516 aa9.33□□□□□ -0.92
ATP2B4-201ENST00000341360 CRBNQ96SW2 442 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 DMRT2Q9Y5R5 561 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 CTTNBP2Q8WZ74 1663 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 CCT4P50991 539 aaKnown RBP9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 DHX16O60231 1041 aaKnown RBP9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 PDCP20941 246 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 CWC22Q9HCG8 908 aaKnown RBP9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
ATP2B4-201ENST00000341360 DHX8Q14562 1220 aaKnown RBP9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 WDR63Q8IWG1 891 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 GCC1Q96CN9 775 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 CDC45O75419 566 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 MTHFSP49914 203 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 NFKBIBQ15653 356 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms