RNA–Protein interactions for RNA: ENST00000341049.6

CAV1-201, Transcript of caveolin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAV1, Length 2,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-201ENST00000341049 PODXL2Q9NZ53 605 aa11.71□□□□□ -0.54
CAV1-201ENST00000341049 ABCC2Q92887 1545 aa11.7□□□□□ -0.54
CAV1-201ENST00000341049 RUNDC1Q96C34 613 aa11.7□□□□□ -0.54
CAV1-201ENST00000341049 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
CAV1-201ENST00000341049 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
CAV1-201ENST00000341049 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
CAV1-201ENST00000341049 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
CAV1-201ENST00000341049 MVPQ14764 893 aaKnown RBP11.69□□□□□ -0.54
CAV1-201ENST00000341049 SYNMO15061 1565 aa11.69□□□□□ -0.54
CAV1-201ENST00000341049 ITPRIPQ8IWB1 547 aa11.69□□□□□ -0.54
CAV1-201ENST00000341049 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
CAV1-201ENST00000341049 DZIP1LQ8IYY4 767 aaKnown RBP11.68□□□□□ -0.54
CAV1-201ENST00000341049 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
CAV1-201ENST00000341049 NPC1L1Q9UHC9 1359 aa11.68□□□□□ -0.54
CAV1-201ENST00000341049 MTHFSP49914 203 aa11.67□□□□□ -0.54
CAV1-201ENST00000341049 ZKSCAN2Q63HK3 967 aa11.67□□□□□ -0.54
CAV1-201ENST00000341049 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
CAV1-201ENST00000341049 SLC12A5Q9H2X9 1139 aa11.67□□□□□ -0.54
CAV1-201ENST00000341049 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
CAV1-201ENST00000341049 U2AF1L5P0DN76 240 aaPredicted RBP11.67□□□□□ -0.54
CAV1-201ENST00000341049 U2AF1Q01081 240 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAV1-201ENST00000341049 CDC42BPBQ9Y5S2 1711 aa11.67□□□□□ -0.54
CAV1-201ENST00000341049 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
CAV1-201ENST00000341049 ISY1Q9ULR0 285 aaKnown RBP11.66□□□□□ -0.54
CAV1-201ENST00000341049 UNC13BO14795 1591 aa11.66□□□□□ -0.54
CAV1-201ENST00000341049 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
CAV1-201ENST00000341049 RIPK4P57078 832 aa11.66□□□□□ -0.54
CAV1-201ENST00000341049 PRDM4Q9UKN5 801 aa11.66□□□□□ -0.54
CAV1-201ENST00000341049 TRAK1Q9UPV9 953 aa11.65□□□□□ -0.54
CAV1-201ENST00000341049 RNF17Q9BXT8 1623 aaKnown RBP11.65□□□□□ -0.54
CAV1-201ENST00000341049 ADGRF5Q8IZF2 1346 aa11.65□□□□□ -0.54
CAV1-201ENST00000341049 DDIT3P35638 169 aa11.65□□□□□ -0.55
CAV1-201ENST00000341049 AAMPQ13685 434 aa11.65□□□□□ -0.55
CAV1-201ENST00000341049 WDR63Q8IWG1 891 aa11.65□□□□□ -0.55
CAV1-201ENST00000341049 LNPKQ9C0E8 428 aa11.65□□□□□ -0.55
CAV1-201ENST00000341049 IQGAP3Q86VI3 1631 aa11.64□□□□□ -0.55
CAV1-201ENST00000341049 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
CAV1-201ENST00000341049 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
CAV1-201ENST00000341049 ARID3AQ99856 593 aa11.64□□□□□ -0.55
CAV1-201ENST00000341049 FAM13BQ9NYF5 915 aa11.64□□□□□ -0.55
CAV1-201ENST00000341049 POLR3AO14802 1390 aaPredicted RBP11.64□□□□□ -0.55
CAV1-201ENST00000341049 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
CAV1-201ENST00000341049 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 ZMYM3Q14202 1370 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 TRIM27P14373 513 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 AFAP1Q8N556 730 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 ATP10AO60312 1499 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
CAV1-201ENST00000341049 ZSCAN30Q86W11 494 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 PREX2Q70Z35 1606 aa11.63□□□□□ -0.55
CAV1-201ENST00000341049 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 MYOM1P52179 1685 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 OFD1O75665 1012 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
CAV1-201ENST00000341049 MAST1Q9Y2H9 1570 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 GBP4Q96PP9 640 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 NCOA3Q9Y6Q9 1424 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 ERVK-7P63135 1459 aa11.62□□□□□ -0.55
CAV1-201ENST00000341049 DUOX2Q9NRD8 1548 aa11.61□□□□□ -0.55
CAV1-201ENST00000341049 CCDC173Q0VFZ6 552 aa11.61□□□□□ -0.55
CAV1-201ENST00000341049 SSH1Q8WYL5 1049 aa11.61□□□□□ -0.55
CAV1-201ENST00000341049 NOB1Q9ULX3 412 aaKnown RBP11.61□□□□□ -0.55
CAV1-201ENST00000341049 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
CAV1-201ENST00000341049 ERCC6Q03468 1493 aa11.61□□□□□ -0.55
CAV1-201ENST00000341049 MSNP26038 577 aaKnown RBP11.61□□□□□ -0.55
CAV1-201ENST00000341049 KDM5AP29375 1690 aaKnown RBP11.61□□□□□ -0.55
CAV1-201ENST00000341049 TTC37Q6PGP7 1564 aa11.61□□□□□ -0.55
CAV1-201ENST00000341049 SCAPERQ9BY12 1400 aa11.6□□□□□ -0.55
CAV1-201ENST00000341049 RAB3GAP1Q15042 981 aa11.6□□□□□ -0.55
CAV1-201ENST00000341049 TMEM57Q8N5G2 664 aa11.6□□□□□ -0.55
CAV1-201ENST00000341049 DDX19BQ9UMR2 479 aa11.6□□□□□ -0.55
CAV1-201ENST00000341049 PPP1R9BQ96SB3 815 aa11.6□□□□□ -0.55
CAV1-201ENST00000341049 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
CAV1-201ENST00000341049 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
CAV1-201ENST00000341049 A0A0U1RQG5 324 aaPredicted RBP11.59□□□□□ -0.55
CAV1-201ENST00000341049 KIF3BO15066 747 aa11.59□□□□□ -0.55
CAV1-201ENST00000341049 CD2BP2O95400 341 aaKnown RBP11.59□□□□□ -0.55
CAV1-201ENST00000341049 EFCAB2Q5VUJ9 269 aa11.59□□□□□ -0.55
CAV1-201ENST00000341049 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
CAV1-201ENST00000341049 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
CAV1-201ENST00000341049 TMEM132EQ6IEE7 984 aa11.59□□□□□ -0.55
CAV1-201ENST00000341049 SMC5Q8IY18 1101 aa11.59□□□□□ -0.55
CAV1-201ENST00000341049 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
CAV1-201ENST00000341049 HDAC1Q13547 482 aaPredicted RBP11.59□□□□□ -0.55
CAV1-201ENST00000341049 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.59□□□□□ -0.55
CAV1-201ENST00000341049 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.56
CAV1-201ENST00000341049 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
CAV1-201ENST00000341049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.58□□□□□ -0.56
CAV1-201ENST00000341049 ANKRD45Q5TZF3 282 aa11.58□□□□□ -0.56
CAV1-201ENST00000341049 ANP32BQ92688 251 aaKnown RBP11.58□□□□□ -0.56
CAV1-201ENST00000341049 TRAPPC8Q9Y2L5 1435 aa11.58□□□□□ -0.56
CAV1-201ENST00000341049 SSFA2P28290 1259 aa11.57□□□□□ -0.56
CAV1-201ENST00000341049 XPCQ01831 940 aaPredicted RBP11.57□□□□□ -0.56
CAV1-201ENST00000341049 SAFB2Q14151 953 aaKnown RBP eCLIP11.57□□□□□ -0.56
CAV1-201ENST00000341049 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
CAV1-201ENST00000341049 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
CAV1-201ENST00000341049 RBM25P49756 843 aaKnown RBP11.57□□□□□ -0.56
CAV1-201ENST00000341049 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms