RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 PADI6Q6TGC4 694 aa3.98□□□□□ -1.77
CCDC30-201ENST00000340612 PCDHB3Q9Y5E6 796 aa3.97□□□□□ -1.77
CCDC30-201ENST00000340612 DDRGK1Q96HY6 314 aa3.97□□□□□ -1.77
CCDC30-201ENST00000340612 TOR4AQ9NXH8 423 aa3.97□□□□□ -1.77
CCDC30-201ENST00000340612 NBPF26B4DH59 902 aa3.96□□□□□ -1.78
CCDC30-201ENST00000340612 GMPRP36959 345 aa3.96□□□□□ -1.78
CCDC30-201ENST00000340612 ZSCAN1Q8NBB4 408 aa3.96□□□□□ -1.78
CCDC30-201ENST00000340612 FAM181BA6NEQ2 426 aa3.96□□□□□ -1.78
CCDC30-201ENST00000340612 HDGFP51858 240 aaKnown RBP3.96□□□□□ -1.78
CCDC30-201ENST00000340612 METTL3Q86U44 580 aaKnown RBP3.95□□□□□ -1.78
CCDC30-201ENST00000340612 KCTD17Q8N5Z5 321 aa3.95□□□□□ -1.78
CCDC30-201ENST00000340612 ERICH6Q7L0X2 663 aa3.95□□□□□ -1.78
CCDC30-201ENST00000340612 ADGRG1Q9Y653 693 aa3.95□□□□□ -1.78
CCDC30-201ENST00000340612 SSTR3P32745 418 aaPredicted RBP3.94□□□□□ -1.78
CCDC30-201ENST00000340612 GPCPD1Q9NPB8 672 aa3.94□□□□□ -1.78
CCDC30-201ENST00000340612 ATP13A2Q9NQ11 1180 aa3.94□□□□□ -1.78
CCDC30-201ENST00000340612 IGSF5Q9NSI5 407 aa3.94□□□□□ -1.78
CCDC30-201ENST00000340612 CLCN1P35523 988 aa3.94□□□□□ -1.78
CCDC30-201ENST00000340612 PXYLP1Q8TE99 480 aa3.94□□□□□ -1.78
CCDC30-201ENST00000340612 SMCPP49901 116 aaPredicted RBP3.93□□□□□ -1.78
CCDC30-201ENST00000340612 CTC1Q2NKJ3 1217 aa3.93□□□□□ -1.78
CCDC30-201ENST00000340612 BEGAINQ9BUH8 593 aa3.93□□□□□ -1.78
CCDC30-201ENST00000340612 SLF2Q8IX21 1173 aa3.93□□□□□ -1.78
CCDC30-201ENST00000340612 FAM217BQ9NTX9 383 aaPredicted RBP3.93□□□□□ -1.78
CCDC30-201ENST00000340612 VEGFBP49765 207 aa3.92□□□□□ -1.78
CCDC30-201ENST00000340612 CYP4X1Q8N118 509 aa3.92□□□□□ -1.78
CCDC30-201ENST00000340612 TTC13Q8NBP0 860 aa3.92□□□□□ -1.78
CCDC30-201ENST00000340612 TRIM47Q96LD4 638 aa3.92□□□□□ -1.78
CCDC30-201ENST00000340612 POLR3EQ9NVU0 708 aa3.92□□□□□ -1.78
CCDC30-201ENST00000340612 ATP1B4Q9UN42 357 aaPredicted RBP3.92□□□□□ -1.78
CCDC30-201ENST00000340612 PROCA1Q8NCQ7 364 aaPredicted RBP3.92□□□□□ -1.78
CCDC30-201ENST00000340612 DAXXQ9UER7 740 aaPredicted RBP3.92□□□□□ -1.78
CCDC30-201ENST00000340612 OATP04181 439 aa3.91□□□□□ -1.78
CCDC30-201ENST00000340612 CERKQ8TCT0 537 aa3.91□□□□□ -1.78
CCDC30-201ENST00000340612 GSK3AP49840 483 aa3.91□□□□□ -1.78
CCDC30-201ENST00000340612 PCMTD1Q96MG8 357 aaPredicted RBP3.91□□□□□ -1.78
CCDC30-201ENST00000340612 RBAK-RBAKDNI3L0D1 243 aa3.9□□□□□ -1.78
CCDC30-201ENST00000340612 ZMYND15Q9H091 742 aa3.9□□□□□ -1.78
CCDC30-201ENST00000340612 RCCD1A6NED2 376 aa3.9□□□□□ -1.79
CCDC30-201ENST00000340612 ADH1BP00325 375 aa3.9□□□□□ -1.79
CCDC30-201ENST00000340612 SH3D19Q5HYK7 790 aa3.9□□□□□ -1.79
CCDC30-201ENST00000340612 FBXO31Q5XUX0 539 aaPredicted RBP3.9□□□□□ -1.79
CCDC30-201ENST00000340612 NECTIN2Q92692 538 aa3.9□□□□□ -1.79
CCDC30-201ENST00000340612 SLC6A16Q9GZN6 736 aa3.9□□□□□ -1.79
CCDC30-201ENST00000340612 MYSM1Q5VVJ2 828 aa3.89□□□□□ -1.79
CCDC30-201ENST00000340612 RBM46Q8TBY0 533 aaKnown RBP3.89□□□□□ -1.79
CCDC30-201ENST00000340612 RBM27Q9P2N5 1060 aaKnown RBP3.89□□□□□ -1.79
CCDC30-201ENST00000340612 ERBB4Q15303 1308 aa3.89□□□□□ -1.79
CCDC30-201ENST00000340612 ARID3CA6NKF2 412 aa3.89□□□□□ -1.79
CCDC30-201ENST00000340612 SMPD1P17405 629 aa3.89□□□□□ -1.79
CCDC30-201ENST00000340612 XP32Q5T750 250 aa3.89□□□□□ -1.79
CCDC30-201ENST00000340612 EYA1Q99502 592 aa3.89□□□□□ -1.79
CCDC30-201ENST00000340612 TTC24A2A3L6 582 aaPredicted RBP3.88□□□□□ -1.79
CCDC30-201ENST00000340612 SLC16A10Q8TF71 515 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 CLUAP1Q96AJ1 413 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 TBC1D2Q9BYX2 928 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 GOPCQ9HD26 462 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 DDX11L8A8MPP1 907 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 SKIV2LQ15477 1246 aaKnown RBP3.88□□□□□ -1.79
CCDC30-201ENST00000340612 ARID3AQ99856 593 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 NXF1Q9UBU9 619 aaKnown RBP3.88□□□□□ -1.79
CCDC30-201ENST00000340612 CSPP1Q1MSJ5 1256 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 PRR14Q9BWN1 585 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 C1orf115Q9H7X2 142 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 SENP2Q9HC62 589 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 LIMD1Q9UGP4 676 aa3.88□□□□□ -1.79
CCDC30-201ENST00000340612 J3QL48 77 aa3.87□□□□□ -1.79
CCDC30-201ENST00000340612 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
CCDC30-201ENST00000340612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.87□□□□□ -1.79
CCDC30-201ENST00000340612 ACTN4O43707 911 aaKnown RBP3.87□□□□□ -1.79
CCDC30-201ENST00000340612 CLK2P49760 499 aaKnown RBP3.87□□□□□ -1.79
CCDC30-201ENST00000340612 MCM6Q14566 821 aa3.87□□□□□ -1.79
CCDC30-201ENST00000340612 IRF7Q92985 503 aa3.87□□□□□ -1.79
CCDC30-201ENST00000340612 RSPH6AQ9H0K4 717 aa3.87□□□□□ -1.79
CCDC30-201ENST00000340612 SPIRE2Q8WWL2 714 aa3.86□□□□□ -1.79
CCDC30-201ENST00000340612 HPS1Q92902 700 aa3.86□□□□□ -1.79
CCDC30-201ENST00000340612 POM121Q96HA1 1249 aa3.86□□□□□ -1.79
CCDC30-201ENST00000340612 CD46P15529 392 aa3.86□□□□□ -1.79
CCDC30-201ENST00000340612 DNAJB2P25686 324 aa3.86□□□□□ -1.79
CCDC30-201ENST00000340612 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.86□□□□□ -1.79
CCDC30-201ENST00000340612 TMEM134Q9H6X4 195 aa3.86□□□□□ -1.79
CCDC30-201ENST00000340612 MOXD2PA6NHM9 499 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
CCDC30-201ENST00000340612 NDUFV2P19404 249 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 RPIAP49247 311 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 KCNMA1Q12791 1236 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 FLIIQ13045 1269 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 RDH13Q8NBN7 331 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 ARXQ96QS3 562 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 FCF1Q9Y324 198 aaKnown RBP3.85□□□□□ -1.79
CCDC30-201ENST00000340612 CD2BP2O95400 341 aaKnown RBP3.85□□□□□ -1.79
CCDC30-201ENST00000340612 CFHP08603 1231 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 UBTFP17480 764 aaKnown RBP3.85□□□□□ -1.79
CCDC30-201ENST00000340612 PUS10Q3MIT2 529 aaKnown RBP3.85□□□□□ -1.79
CCDC30-201ENST00000340612 SCUBE3Q8IX30 993 aa3.85□□□□□ -1.79
CCDC30-201ENST00000340612 QPCTQ16769 361 aa3.84□□□□□ -1.79
CCDC30-201ENST00000340612 RIC3Q7Z5B4 369 aa3.84□□□□□ -1.79
CCDC30-201ENST00000340612 HLA-CQ95604 372 aa3.84□□□□□ -1.79
CCDC30-201ENST00000340612 SNRKQ9NRH2 765 aa3.84□□□□□ -1.79
CCDC30-201ENST00000340612 H3BM21 787 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms