RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 PLXNC1O60486 1568 aa25.83■■□□□ 1.72
RUNX3-202ENST00000338888 RNF17Q9BXT8 1623 aaKnown RBP25.82■■□□□ 1.72
RUNX3-202ENST00000338888 MFAP1P55081 439 aaKnown RBP25.82■■□□□ 1.72
RUNX3-202ENST00000338888 RWDD1Q9H446 243 aaPredicted RBP25.82■■□□□ 1.72
RUNX3-202ENST00000338888 RRP7AQ9Y3A4 280 aaKnown RBP25.82■■□□□ 1.72
RUNX3-202ENST00000338888 DUOX2Q9NRD8 1548 aa25.81■■□□□ 1.72
RUNX3-202ENST00000338888 SCAPERQ9BY12 1400 aa25.81■■□□□ 1.72
RUNX3-202ENST00000338888 ESPNB1AK53 854 aa25.8■■□□□ 1.72
RUNX3-202ENST00000338888 ARAP3Q8WWN8 1544 aa25.8■■□□□ 1.72
RUNX3-202ENST00000338888 ADGRL1O94910 1474 aa25.8■■□□□ 1.72
RUNX3-202ENST00000338888 UNC13BO14795 1591 aa25.79■■□□□ 1.72
RUNX3-202ENST00000338888 ERBB4Q15303 1308 aa25.79■■□□□ 1.72
RUNX3-202ENST00000338888 ZMYM3Q14202 1370 aa25.78■■□□□ 1.72
RUNX3-202ENST00000338888 AAMPQ13685 434 aa25.78■■□□□ 1.72
RUNX3-202ENST00000338888 SCAF11Q99590 1463 aaKnown RBP25.75■■□□□ 1.71
RUNX3-202ENST00000338888 DDX11L8A8MPP1 907 aa25.74■■□□□ 1.71
RUNX3-202ENST00000338888 CARD14Q9BXL6 1004 aa25.74■■□□□ 1.71
RUNX3-202ENST00000338888 IQGAP1P46940 1657 aa25.74■■□□□ 1.71
RUNX3-202ENST00000338888 ATP10AO60312 1499 aa25.74■■□□□ 1.71
RUNX3-202ENST00000338888 IQGAP3Q86VI3 1631 aa25.73■■□□□ 1.71
RUNX3-202ENST00000338888 RTEL1-TNFRSF6BF6WH68 1400 aa25.73■■□□□ 1.71
RUNX3-202ENST00000338888 CD109Q6YHK3 1445 aa25.73■■□□□ 1.71
RUNX3-202ENST00000338888 ZFYVE16Q7Z3T8 1539 aa25.73■■□□□ 1.71
RUNX3-202ENST00000338888 HSCBQ8IWL3 235 aa25.72■■□□□ 1.71
RUNX3-202ENST00000338888 TRIM44Q96DX7 344 aaPredicted RBP25.72■■□□□ 1.71
RUNX3-202ENST00000338888 MYOM1P52179 1685 aa25.72■■□□□ 1.71
RUNX3-202ENST00000338888 ZNF692Q9BU19 519 aaPredicted RBP25.71■■□□□ 1.71
RUNX3-202ENST00000338888 MADDQ8WXG6 1647 aa25.7■■□□□ 1.7
RUNX3-202ENST00000338888 TCP11L2Q8N4U5 519 aa25.69■■□□□ 1.7
RUNX3-202ENST00000338888 GAS2L3Q86XJ1 694 aa25.68■■□□□ 1.7
RUNX3-202ENST00000338888 KIF3BO15066 747 aa25.67■■□□□ 1.7
RUNX3-202ENST00000338888 TNNT2P45379 298 aaPredicted RBP25.67■■□□□ 1.7
RUNX3-202ENST00000338888 ATP7AQ04656 1500 aa25.67■■□□□ 1.7
RUNX3-202ENST00000338888 MVPQ14764 893 aaKnown RBP25.67■■□□□ 1.7
RUNX3-202ENST00000338888 ISY1Q9ULR0 285 aaKnown RBP25.67■■□□□ 1.7
RUNX3-202ENST00000338888 RUNDC1Q96C34 613 aa25.67■■□□□ 1.7
RUNX3-202ENST00000338888 POLR3AO14802 1390 aaPredicted RBP25.65■■□□□ 1.7
RUNX3-202ENST00000338888 TNPO1Q92973 898 aaKnown RBP25.64■■□□□ 1.7
RUNX3-202ENST00000338888 WDR63Q8IWG1 891 aa25.63■■□□□ 1.69
RUNX3-202ENST00000338888 FTSJ3Q8IY81 847 aaKnown RBP25.63■■□□□ 1.69
RUNX3-202ENST00000338888 DDIT3P35638 169 aa25.62■■□□□ 1.69
RUNX3-202ENST00000338888 KDM5AP29375 1690 aaKnown RBP25.61■■□□□ 1.69
RUNX3-202ENST00000338888 ZKSCAN2Q63HK3 967 aa25.6■■□□□ 1.69
RUNX3-202ENST00000338888 DZIP1LQ8IYY4 767 aaKnown RBP25.6■■□□□ 1.69
RUNX3-202ENST00000338888 PHF23Q9BUL5 403 aaPredicted RBP25.6■■□□□ 1.69
RUNX3-202ENST00000338888 INO80Q9ULG1 1556 aaPredicted RBP25.6■■□□□ 1.69
RUNX3-202ENST00000338888 MORC1Q86VD1 984 aa25.59■■□□□ 1.69
RUNX3-202ENST00000338888 RAPGEF3O95398 923 aa25.57■■□□□ 1.68
RUNX3-202ENST00000338888 TPM2P07951 284 aa25.57■■□□□ 1.68
RUNX3-202ENST00000338888 GBP4Q96PP9 640 aa25.57■■□□□ 1.68
RUNX3-202ENST00000338888 NCOA3Q9Y6Q9 1424 aa25.57■■□□□ 1.68
RUNX3-202ENST00000338888 ERVK-7P63135 1459 aa25.56■■□□□ 1.68
RUNX3-202ENST00000338888 ZNF518AQ6AHZ1 1483 aa25.56■■□□□ 1.68
RUNX3-202ENST00000338888 HSP90AB1P08238 724 aaKnown RBP25.56■■□□□ 1.68
RUNX3-202ENST00000338888 CFAP70Q5T0N1 1121 aa25.56■■□□□ 1.68
RUNX3-202ENST00000338888 CEP152O94986 1710 aa25.55■■□□□ 1.68
RUNX3-202ENST00000338888 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
RUNX3-202ENST00000338888 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
RUNX3-202ENST00000338888 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
RUNX3-202ENST00000338888 FOXD4L1Q9NU39 408 aa25.54■■□□□ 1.68
RUNX3-202ENST00000338888 SMC5Q8IY18 1101 aa25.54■■□□□ 1.68
RUNX3-202ENST00000338888 HDAC1Q13547 482 aaPredicted RBP25.53■■□□□ 1.68
RUNX3-202ENST00000338888 SNX21Q969T3 373 aa25.53■■□□□ 1.68
RUNX3-202ENST00000338888 RBM25P49756 843 aaKnown RBP25.53■■□□□ 1.68
RUNX3-202ENST00000338888 KIAA1211Q6ZU35 1233 aa25.53■■□□□ 1.68
RUNX3-202ENST00000338888 STAC3Q96MF2 364 aa25.53■■□□□ 1.68
RUNX3-202ENST00000338888 KANK1Q14678 1352 aa25.53■■□□□ 1.68
RUNX3-202ENST00000338888 RAB3GAP1Q15042 981 aa25.52■■□□□ 1.68
RUNX3-202ENST00000338888 ITPRIPQ8IWB1 547 aa25.52■■□□□ 1.68
RUNX3-202ENST00000338888 IQSEC2Q5JU85 1478 aa25.52■■□□□ 1.68
RUNX3-202ENST00000338888 SKOR2Q2VWA4 1001 aaPredicted RBP25.52■■□□□ 1.68
RUNX3-202ENST00000338888 SPHKAPQ2M3C7 1700 aa25.51■■□□□ 1.68
RUNX3-202ENST00000338888 KIDINS220Q9ULH0 1771 aa25.51■■□□□ 1.68
RUNX3-202ENST00000338888 PDCL3Q9H2J4 239 aa25.51■■□□□ 1.67
RUNX3-202ENST00000338888 CIZ1Q9ULV3 898 aaPredicted RBP25.51■■□□□ 1.67
RUNX3-202ENST00000338888 POGZQ7Z3K3 1410 aa25.51■■□□□ 1.67
RUNX3-202ENST00000338888 TSR2Q969E8 191 aaKnown RBP25.5■■□□□ 1.67
RUNX3-202ENST00000338888 SMC4Q9NTJ3 1288 aa25.5■■□□□ 1.67
RUNX3-202ENST00000338888 CCDC27Q2M243 656 aa25.5■■□□□ 1.67
RUNX3-202ENST00000338888 SHPRHQ149N8 1683 aa25.5■■□□□ 1.67
RUNX3-202ENST00000338888 TRIM27P14373 513 aa25.5■■□□□ 1.67
RUNX3-202ENST00000338888 MTHFSP49914 203 aa25.49■■□□□ 1.67
RUNX3-202ENST00000338888 SLC24A1O60721 1099 aa25.49■■□□□ 1.67
RUNX3-202ENST00000338888 GGT6Q6P531 493 aa25.48■■□□□ 1.67
RUNX3-202ENST00000338888 NSD3Q9BZ95 1437 aa25.48■■□□□ 1.67
RUNX3-202ENST00000338888 FAM69CQ0P6D2 419 aa25.47■■□□□ 1.67
RUNX3-202ENST00000338888 CCDC173Q0VFZ6 552 aa25.47■■□□□ 1.67
RUNX3-202ENST00000338888 DDX19BQ9UMR2 479 aa25.47■■□□□ 1.67
RUNX3-202ENST00000338888 CFAP74Q9C0B2 1584 aa25.47■■□□□ 1.67
RUNX3-202ENST00000338888 NASPP49321 788 aaPredicted RBP25.46■■□□□ 1.67
RUNX3-202ENST00000338888 LNPKQ9C0E8 428 aa25.46■■□□□ 1.67
RUNX3-202ENST00000338888 CD2BP2O95400 341 aaKnown RBP25.45■■□□□ 1.66
RUNX3-202ENST00000338888 EXOSC9Q06265 439 aaKnown RBP25.45■■□□□ 1.66
RUNX3-202ENST00000338888 SLC12A5Q9H2X9 1139 aa25.45■■□□□ 1.66
RUNX3-202ENST00000338888 DEPDC5O75140 1603 aa25.45■■□□□ 1.66
RUNX3-202ENST00000338888 ZSCAN30Q86W11 494 aa25.44■■□□□ 1.66
RUNX3-202ENST00000338888 PPP1R9BQ96SB3 815 aa25.44■■□□□ 1.66
RUNX3-202ENST00000338888 TRPM2O94759 1503 aa25.44■■□□□ 1.66
RUNX3-202ENST00000338888 SSH1Q8WYL5 1049 aa25.44■■□□□ 1.66
RUNX3-202ENST00000338888 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms