RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 ADGRB1O14514 1584 aa25.77■■□□□ 1.72
CDCA4-201ENST00000336219 CHGAP10645 457 aaKnown RBP25.77■■□□□ 1.72
CDCA4-201ENST00000336219 NSD3Q9BZ95 1437 aa25.77■■□□□ 1.72
CDCA4-201ENST00000336219 IGHDP01880 384 aa25.77■■□□□ 1.72
CDCA4-201ENST00000336219 C14orf93Q9H972 538 aaKnown RBP25.76■■□□□ 1.71
CDCA4-201ENST00000336219 TRAK1Q9UPV9 953 aa25.76■■□□□ 1.71
CDCA4-201ENST00000336219 CFAP74Q9C0B2 1584 aa25.75■■□□□ 1.71
CDCA4-201ENST00000336219 POGZQ7Z3K3 1410 aa25.74■■□□□ 1.71
CDCA4-201ENST00000336219 MLH3Q9UHC1 1453 aa25.73■■□□□ 1.71
CDCA4-201ENST00000336219 HECW2Q9P2P5 1572 aa25.73■■□□□ 1.71
CDCA4-201ENST00000336219 USP32Q8NFA0 1604 aa25.72■■□□□ 1.71
CDCA4-201ENST00000336219 MORC1Q86VD1 984 aa25.71■■□□□ 1.71
CDCA4-201ENST00000336219 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
CDCA4-201ENST00000336219 SLC12A5Q9H2X9 1139 aa25.71■■□□□ 1.71
CDCA4-201ENST00000336219 PRKCSHP14314 528 aaPredicted RBP25.7■■□□□ 1.7
CDCA4-201ENST00000336219 GGT6Q6P531 493 aa25.69■■□□□ 1.7
CDCA4-201ENST00000336219 RPGRIP1LQ68CZ1 1315 aa25.68■■□□□ 1.7
CDCA4-201ENST00000336219 SEC24BO95487 1268 aa25.68■■□□□ 1.7
CDCA4-201ENST00000336219 ABCC3O15438 1527 aa25.68■■□□□ 1.7
CDCA4-201ENST00000336219 CD109Q6YHK3 1445 aa25.68■■□□□ 1.7
CDCA4-201ENST00000336219 TMEM132EQ6IEE7 984 aa25.68■■□□□ 1.7
CDCA4-201ENST00000336219 USP19O94966 1318 aa25.67■■□□□ 1.7
CDCA4-201ENST00000336219 NINLQ9Y2I6 1382 aa25.67■■□□□ 1.7
CDCA4-201ENST00000336219 PDE3AQ14432 1141 aa25.67■■□□□ 1.7
CDCA4-201ENST00000336219 PANK1Q8TE04 598 aa25.67■■□□□ 1.7
CDCA4-201ENST00000336219 IQSEC2Q5JU85 1478 aa25.66■■□□□ 1.7
CDCA4-201ENST00000336219 GLI2P10070 1586 aa25.65■■□□□ 1.7
CDCA4-201ENST00000336219 CAMSAP1Q5T5Y3 1602 aa25.65■■□□□ 1.7
CDCA4-201ENST00000336219 COG6Q9Y2V7 657 aa25.65■■□□□ 1.7
CDCA4-201ENST00000336219 CGNL1Q0VF96 1302 aa25.65■■□□□ 1.7
CDCA4-201ENST00000336219 TNNT2P45379 298 aaPredicted RBP25.65■■□□□ 1.7
CDCA4-201ENST00000336219 RUNDC1Q96C34 613 aa25.65■■□□□ 1.7
CDCA4-201ENST00000336219 SIGLEC1Q9BZZ2 1709 aa25.64■■□□□ 1.7
CDCA4-201ENST00000336219 NPM1P06748 294 aaKnown RBP eCLIP25.64■■□□□ 1.7
CDCA4-201ENST00000336219 ARHGEF28Q8N1W1 1705 aaKnown RBP25.63■■□□□ 1.69
CDCA4-201ENST00000336219 PIK3C2BO00750 1634 aa25.62■■□□□ 1.69
CDCA4-201ENST00000336219 VIRMAQ69YN4 1812 aaKnown RBP25.61■■□□□ 1.69
CDCA4-201ENST00000336219 PHF23Q9BUL5 403 aaPredicted RBP25.61■■□□□ 1.69
CDCA4-201ENST00000336219 CANXP27824 592 aaKnown RBP25.61■■□□□ 1.69
CDCA4-201ENST00000336219 NEUROD2Q15784 382 aa25.6■■□□□ 1.69
CDCA4-201ENST00000336219 TCP11L2Q8N4U5 519 aa25.6■■□□□ 1.69
CDCA4-201ENST00000336219 TULP4Q9NRJ4 1543 aa25.59■■□□□ 1.69
CDCA4-201ENST00000336219 RRP7AQ9Y3A4 280 aaKnown RBP25.59■■□□□ 1.69
CDCA4-201ENST00000336219 NEXMIFQ5QGS0 1516 aa25.59■■□□□ 1.69
CDCA4-201ENST00000336219 MTHFSP49914 203 aa25.59■■□□□ 1.69
CDCA4-201ENST00000336219 PUS7Q96PZ0 661 aaKnown RBP25.59■■□□□ 1.69
CDCA4-201ENST00000336219 CLUAP1Q96AJ1 413 aa25.58■■□□□ 1.69
CDCA4-201ENST00000336219 TNNQ9UQP3 1299 aa25.57■■□□□ 1.68
CDCA4-201ENST00000336219 ANKRD36BQ8N2N9 1353 aa25.56■■□□□ 1.68
CDCA4-201ENST00000336219 EVC2Q86UK5 1308 aa25.56■■□□□ 1.68
CDCA4-201ENST00000336219 WDR63Q8IWG1 891 aa25.56■■□□□ 1.68
CDCA4-201ENST00000336219 CFAP53Q96M91 514 aa25.55■■□□□ 1.68
CDCA4-201ENST00000336219 SLKQ9H2G2 1235 aaPredicted RBP25.55■■□□□ 1.68
CDCA4-201ENST00000336219 NSD2O96028 1365 aa25.55■■□□□ 1.68
CDCA4-201ENST00000336219 RARSP54136 660 aaKnown RBP25.55■■□□□ 1.68
CDCA4-201ENST00000336219 VGFO15240 615 aaPredicted RBP25.54■■□□□ 1.68
CDCA4-201ENST00000336219 CCDC27Q2M243 656 aa25.54■■□□□ 1.68
CDCA4-201ENST00000336219 POGKQ9P215 609 aa25.53■■□□□ 1.68
CDCA4-201ENST00000336219 NUTM2DQ5VT03 806 aaPredicted RBP25.52■■□□□ 1.68
CDCA4-201ENST00000336219 BCL2L13Q9BXK5 485 aa25.52■■□□□ 1.68
CDCA4-201ENST00000336219 DIP2CQ9Y2E4 1556 aa25.51■■□□□ 1.67
CDCA4-201ENST00000336219 NEO1Q92859 1461 aa25.5■■□□□ 1.67
CDCA4-201ENST00000336219 RLBP1P12271 317 aa25.5■■□□□ 1.67
CDCA4-201ENST00000336219 MAPK8IP3Q9UPT6 1336 aa25.49■■□□□ 1.67
CDCA4-201ENST00000336219 NCBP3Q53F19 620 aaKnown RBP25.49■■□□□ 1.67
CDCA4-201ENST00000336219 ADGRB2O60241 1585 aa25.49■■□□□ 1.67
CDCA4-201ENST00000336219 PCDHB15Q9Y5E8 787 aa25.48■■□□□ 1.67
CDCA4-201ENST00000336219 NLRP1Q9C000 1473 aa25.48■■□□□ 1.67
CDCA4-201ENST00000336219 ARHGAP31Q2M1Z3 1444 aa25.48■■□□□ 1.67
CDCA4-201ENST00000336219 RAPGEF3O95398 923 aa25.47■■□□□ 1.67
CDCA4-201ENST00000336219 AAMPQ13685 434 aa25.47■■□□□ 1.67
CDCA4-201ENST00000336219 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
CDCA4-201ENST00000336219 ZFYVE9O95405 1425 aa25.45■■□□□ 1.66
CDCA4-201ENST00000336219 U2AF1L5P0DN76 240 aaPredicted RBP25.44■■□□□ 1.66
CDCA4-201ENST00000336219 U2AF1Q01081 240 aaKnown RBP eCLIP25.44■■□□□ 1.66
CDCA4-201ENST00000336219 MYO5BQ9ULV0 1848 aa25.44■■□□□ 1.66
CDCA4-201ENST00000336219 PMFBP1Q8TBY8 1022 aa25.43■■□□□ 1.66
CDCA4-201ENST00000336219 MYH16Q9H6N6 1097 aa25.43■■□□□ 1.66
CDCA4-201ENST00000336219 IDI1Q13907 227 aa25.43■■□□□ 1.66
CDCA4-201ENST00000336219 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
CDCA4-201ENST00000336219 ABCC11Q96J66 1382 aa25.42■■□□□ 1.66
CDCA4-201ENST00000336219 BECN1Q14457 450 aa25.42■■□□□ 1.66
CDCA4-201ENST00000336219 RICTORQ6R327 1708 aa25.42■■□□□ 1.66
CDCA4-201ENST00000336219 A0A1W2PP64 1363 aa25.42■■□□□ 1.66
CDCA4-201ENST00000336219 PDZRN3Q9UPQ7 1066 aa25.41■■□□□ 1.66
CDCA4-201ENST00000336219 SAFB2Q14151 953 aaKnown RBP eCLIP25.41■■□□□ 1.66
CDCA4-201ENST00000336219 SPRYD3Q8NCJ5 442 aa25.39■■□□□ 1.66
CDCA4-201ENST00000336219 SLC52A1Q9NWF4 448 aa25.38■■□□□ 1.65
CDCA4-201ENST00000336219 ANKRD26Q9UPS8 1709 aa25.38■■□□□ 1.65
CDCA4-201ENST00000336219 ANTXR1Q9H6X2 564 aa25.38■■□□□ 1.65
CDCA4-201ENST00000336219 EIF5BO60841 1220 aaKnown RBP25.37■■□□□ 1.65
CDCA4-201ENST00000336219 ARXQ96QS3 562 aa25.37■■□□□ 1.65
CDCA4-201ENST00000336219 PTPRMP28827 1452 aa25.37■■□□□ 1.65
CDCA4-201ENST00000336219 TMEM131LA2VDJ0 1609 aa25.37■■□□□ 1.65
CDCA4-201ENST00000336219 PREX1Q8TCU6 1659 aa25.36■■□□□ 1.65
CDCA4-201ENST00000336219 COL3A1P02461 1466 aaPredicted RBP25.36■■□□□ 1.65
CDCA4-201ENST00000336219 TBC1D2Q9BYX2 928 aa25.36■■□□□ 1.65
CDCA4-201ENST00000336219 STK26Q9P289 416 aa25.36■■□□□ 1.65
CDCA4-201ENST00000336219 SRPK2P78362 688 aaKnown RBP25.36■■□□□ 1.65
CDCA4-201ENST00000336219 ZMYM3Q14202 1370 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms