RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 TRMT2AQ8IZ69 625 aaKnown RBP26.59■■□□□ 1.85
SPNS1-203ENST00000334536 CENPJQ9HC77 1338 aaPredicted RBP26.58■■□□□ 1.85
SPNS1-203ENST00000334536 CARD14Q9BXL6 1004 aa26.57■■□□□ 1.84
SPNS1-203ENST00000334536 FRMPD1Q5SYB0 1578 aa26.57■■□□□ 1.84
SPNS1-203ENST00000334536 NPATQ14207 1427 aa26.56■■□□□ 1.84
SPNS1-203ENST00000334536 C14orf93Q9H972 538 aaKnown RBP26.56■■□□□ 1.84
SPNS1-203ENST00000334536 HECW2Q9P2P5 1572 aa26.56■■□□□ 1.84
SPNS1-203ENST00000334536 CLCN1P35523 988 aa26.55■■□□□ 1.84
SPNS1-203ENST00000334536 PPLO60437 1756 aa26.55■■□□□ 1.84
SPNS1-203ENST00000334536 GLI2P10070 1586 aa26.54■■□□□ 1.84
SPNS1-203ENST00000334536 POLR3AO14802 1390 aaPredicted RBP26.53■■□□□ 1.84
SPNS1-203ENST00000334536 PNNQ9H307 717 aaKnown RBP26.53■■□□□ 1.84
SPNS1-203ENST00000334536 DIP2BQ9P265 1576 aa26.51■■□□□ 1.84
SPNS1-203ENST00000334536 ZC3H13Q5T200 1668 aaKnown RBP26.5■■□□□ 1.83
SPNS1-203ENST00000334536 ABCC3O15438 1527 aa26.5■■□□□ 1.83
SPNS1-203ENST00000334536 ADGRB1O14514 1584 aa26.5■■□□□ 1.83
SPNS1-203ENST00000334536 KDM2BQ8NHM5 1336 aa26.49■■□□□ 1.83
SPNS1-203ENST00000334536 E9PSI1 815 aa26.49■■□□□ 1.83
SPNS1-203ENST00000334536 CHGAP10645 457 aaKnown RBP26.49■■□□□ 1.83
SPNS1-203ENST00000334536 C20orf194Q5TEA3 1177 aa26.49■■□□□ 1.83
SPNS1-203ENST00000334536 NAP1L5Q96NT1 182 aaPredicted RBP26.49■■□□□ 1.83
SPNS1-203ENST00000334536 NKTRP30414 1462 aaKnown RBP26.48■■□□□ 1.83
SPNS1-203ENST00000334536 NEO1Q92859 1461 aa26.48■■□□□ 1.83
SPNS1-203ENST00000334536 APAF1O14727 1248 aa26.48■■□□□ 1.83
SPNS1-203ENST00000334536 CENPQQ7L2Z9 268 aaPredicted RBP26.48■■□□□ 1.83
SPNS1-203ENST00000334536 PUS7Q96PZ0 661 aaKnown RBP26.48■■□□□ 1.83
SPNS1-203ENST00000334536 CCDC146Q8IYE0 955 aa26.48■■□□□ 1.83
SPNS1-203ENST00000334536 FRAT2O75474 233 aaPredicted RBP26.47■■□□□ 1.83
SPNS1-203ENST00000334536 FAM69CQ0P6D2 419 aa26.47■■□□□ 1.83
SPNS1-203ENST00000334536 QRICH2Q9H0J4 1663 aa26.46■■□□□ 1.83
SPNS1-203ENST00000334536 GGT6Q6P531 493 aa26.45■■□□□ 1.82
SPNS1-203ENST00000334536 USP32Q8NFA0 1604 aa26.45■■□□□ 1.82
SPNS1-203ENST00000334536 NSD3Q9BZ95 1437 aa26.43■■□□□ 1.82
SPNS1-203ENST00000334536 TRAK1Q9UPV9 953 aa26.43■■□□□ 1.82
SPNS1-203ENST00000334536 CAMSAP1Q5T5Y3 1602 aa26.43■■□□□ 1.82
SPNS1-203ENST00000334536 MORC1Q86VD1 984 aa26.41■■□□□ 1.82
SPNS1-203ENST00000334536 PIK3C2BO00750 1634 aa26.41■■□□□ 1.82
SPNS1-203ENST00000334536 CALD1Q05682 793 aaKnown RBP26.39■■□□□ 1.81
SPNS1-203ENST00000334536 ARHGAP31Q2M1Z3 1444 aa26.39■■□□□ 1.81
SPNS1-203ENST00000334536 TSPOAP1O95153 1857 aa26.39■■□□□ 1.81
SPNS1-203ENST00000334536 VGFO15240 615 aaPredicted RBP26.38■■□□□ 1.81
SPNS1-203ENST00000334536 SPINK5Q9NQ38 1064 aaPredicted RBP26.38■■□□□ 1.81
SPNS1-203ENST00000334536 NINLQ9Y2I6 1382 aa26.37■■□□□ 1.81
SPNS1-203ENST00000334536 SHPRHQ149N8 1683 aa26.35■■□□□ 1.81
SPNS1-203ENST00000334536 RAPGEF3O95398 923 aa26.35■■□□□ 1.81
SPNS1-203ENST00000334536 SLC12A5Q9H2X9 1139 aa26.35■■□□□ 1.81
SPNS1-203ENST00000334536 TPM2P07951 284 aa26.34■■□□□ 1.81
SPNS1-203ENST00000334536 PDCL3Q9H2J4 239 aa26.34■■□□□ 1.81
SPNS1-203ENST00000334536 CFAP65Q6ZU64 1925 aaKnown RBP26.34■■□□□ 1.81
SPNS1-203ENST00000334536 NSD2O96028 1365 aa26.34■■□□□ 1.81
SPNS1-203ENST00000334536 NEXMIFQ5QGS0 1516 aa26.34■■□□□ 1.81
SPNS1-203ENST00000334536 CGNL1Q0VF96 1302 aa26.34■■□□□ 1.81
SPNS1-203ENST00000334536 EVC2Q86UK5 1308 aa26.34■■□□□ 1.81
SPNS1-203ENST00000334536 ZFYVE9O95405 1425 aa26.33■■□□□ 1.81
SPNS1-203ENST00000334536 FAM161AQ3B820 660 aa26.33■■□□□ 1.81
SPNS1-203ENST00000334536 TMEM132EQ6IEE7 984 aa26.33■■□□□ 1.81
SPNS1-203ENST00000334536 DIP2CQ9Y2E4 1556 aa26.33■■□□□ 1.81
SPNS1-203ENST00000334536 RICTORQ6R327 1708 aa26.33■■□□□ 1.8
SPNS1-203ENST00000334536 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.8
SPNS1-203ENST00000334536 NCBP3Q53F19 620 aaKnown RBP26.32■■□□□ 1.8
SPNS1-203ENST00000334536 WWC1Q8IX03 1113 aa26.32■■□□□ 1.8
SPNS1-203ENST00000334536 RUNDC1Q96C34 613 aa26.32■■□□□ 1.8
SPNS1-203ENST00000334536 KIF13AQ9H1H9 1805 aa26.32■■□□□ 1.8
SPNS1-203ENST00000334536 PDE3AQ14432 1141 aa26.31■■□□□ 1.8
SPNS1-203ENST00000334536 ARHGEF28Q8N1W1 1705 aaKnown RBP26.3■■□□□ 1.8
SPNS1-203ENST00000334536 ANKRD36BQ8N2N9 1353 aa26.3■■□□□ 1.8
SPNS1-203ENST00000334536 CFAP53Q96M91 514 aa26.29■■□□□ 1.8
SPNS1-203ENST00000334536 IQSEC2Q5JU85 1478 aa26.28■■□□□ 1.8
SPNS1-203ENST00000334536 SLC4A3P48751 1232 aa26.28■■□□□ 1.8
SPNS1-203ENST00000334536 BCAR3O75815 825 aa26.27■■□□□ 1.8
SPNS1-203ENST00000334536 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
SPNS1-203ENST00000334536 DMRT2Q9Y5R5 561 aa26.27■■□□□ 1.8
SPNS1-203ENST00000334536 TULP4Q9NRJ4 1543 aa26.27■■□□□ 1.8
SPNS1-203ENST00000334536 WDR63Q8IWG1 891 aa26.27■■□□□ 1.8
SPNS1-203ENST00000334536 SLC52A1Q9NWF4 448 aa26.27■■□□□ 1.8
SPNS1-203ENST00000334536 CCDC27Q2M243 656 aa26.26■■□□□ 1.79
SPNS1-203ENST00000334536 POGKQ9P215 609 aa26.24■■□□□ 1.79
SPNS1-203ENST00000334536 FSD2A1L4K1 749 aa26.24■■□□□ 1.79
SPNS1-203ENST00000334536 AAMPQ13685 434 aa26.23■■□□□ 1.79
SPNS1-203ENST00000334536 SKAP1Q86WV1 359 aa26.23■■□□□ 1.79
SPNS1-203ENST00000334536 MTHFSP49914 203 aa26.22■■□□□ 1.79
SPNS1-203ENST00000334536 RBM10P98175 930 aaKnown RBP26.22■■□□□ 1.79
SPNS1-203ENST00000334536 TCP11L2Q8N4U5 519 aa26.22■■□□□ 1.79
SPNS1-203ENST00000334536 C8orf34Q49A92 452 aa26.21■■□□□ 1.79
SPNS1-203ENST00000334536 IDI1Q13907 227 aa26.2■■□□□ 1.78
SPNS1-203ENST00000334536 GOLGA6L3A6NEY3 463 aa26.19■■□□□ 1.78
SPNS1-203ENST00000334536 TNNT2P45379 298 aaPredicted RBP26.19■■□□□ 1.78
SPNS1-203ENST00000334536 VIRMAQ69YN4 1812 aaKnown RBP26.19■■□□□ 1.78
SPNS1-203ENST00000334536 PRDM4Q9UKN5 801 aa26.18■■□□□ 1.78
SPNS1-203ENST00000334536 ISY1Q9ULR0 285 aaKnown RBP26.17■■□□□ 1.78
SPNS1-203ENST00000334536 YEATS2Q9ULM3 1422 aa26.16■■□□□ 1.78
SPNS1-203ENST00000334536 FGD1P98174 961 aa26.16■■□□□ 1.78
SPNS1-203ENST00000334536 XRCC6P12956 609 aaKnown RBP eCLIP26.15■■□□□ 1.78
SPNS1-203ENST00000334536 CANXP27824 592 aaKnown RBP26.15■■□□□ 1.78
SPNS1-203ENST00000334536 RARSP54136 660 aaKnown RBP26.15■■□□□ 1.78
SPNS1-203ENST00000334536 ABCC11Q96J66 1382 aa26.14■■□□□ 1.78
SPNS1-203ENST00000334536 CLUAP1Q96AJ1 413 aa26.14■■□□□ 1.78
SPNS1-203ENST00000334536 BECN1Q14457 450 aa26.14■■□□□ 1.77
SPNS1-203ENST00000334536 NUTM2DQ5VT03 806 aaPredicted RBP26.14■■□□□ 1.77
SPNS1-203ENST00000334536 PREX1Q8TCU6 1659 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms