RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ANKRD1Q15327 319 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 ERICH2A1L162 156 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 KIF3BO15066 747 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 MARCH6O60337 910 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 HSP90AB3PQ58FF7 597 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 TUBB4BP68371 445 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 TRIM5Q9C035 493 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 ERICH3Q5RHP9 1530 aa6.6□□□□□ -1.35
PTPRB-202ENST00000334414 NUP155O75694 1391 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 TUBB4AP04350 444 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 ODF2Q5BJF6 829 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 CREBRFQ8IUR6 639 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 ANO2Q9NQ90 1003 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 TAOK2Q9UL54 1235 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 WASHC2AQ641Q2 1341 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 WASHC2CQ9Y4E1 1318 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 DYNC1I1O14576 645 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 CT47A1Q5JQC4 288 aaPredicted RBP6.59□□□□□ -1.35
PTPRB-202ENST00000334414 DZIP1LQ8IYY4 767 aaKnown RBP6.59□□□□□ -1.35
PTPRB-202ENST00000334414 ZNHIT6Q9NWK9 470 aaKnown RBP6.59□□□□□ -1.35
PTPRB-202ENST00000334414 SMG6Q86US8 1419 aaKnown RBP6.59□□□□□ -1.35
PTPRB-202ENST00000334414 CLUAP1Q96AJ1 413 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 IVLP07476 585 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 GRPEL1Q9HAV7 217 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 EPS15P42566 896 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 ZSCAN12O43309 604 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 FYCO1Q9BQS8 1478 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 TTLL5Q6EMB2 1281 aa6.59□□□□□ -1.35
PTPRB-202ENST00000334414 HSP90AB2PQ58FF8 381 aa6.59□□□□□ -1.36
PTPRB-202ENST00000334414 MPHOSPH9Q99550 1183 aa6.59□□□□□ -1.36
PTPRB-202ENST00000334414 RRBP1Q9P2E9 1410 aaKnown RBP6.59□□□□□ -1.36
PTPRB-202ENST00000334414 TRDNQ13061 729 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 FILIP1Q7Z7B0 1213 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 ANKRD45Q5TZF3 282 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 PRIMPOLQ96LW4 560 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 CAVIN2O95810 425 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 PKD2Q13563 968 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 GOLGA6L9A6NEM1 432 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 HMGB1P09429 215 aaKnown RBP6.58□□□□□ -1.36
PTPRB-202ENST00000334414 NAP1L1P55209 391 aaKnown RBP6.58□□□□□ -1.36
PTPRB-202ENST00000334414 ABCC8Q09428 1581 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 MAGEC2Q9UBF1 373 aaPredicted RBP6.58□□□□□ -1.36
PTPRB-202ENST00000334414 A0A0G2JS52 829 aa6.58□□□□□ -1.36
PTPRB-202ENST00000334414 TAF7LQ5H9L4 462 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 GIGYF2Q6Y7W6 1299 aaKnown RBP6.57□□□□□ -1.36
PTPRB-202ENST00000334414 WDR33Q9C0J8 1336 aaKnown RBP6.57□□□□□ -1.36
PTPRB-202ENST00000334414 TXLNAP40222 546 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 ESPNB1AK53 854 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 CCDC181Q5TID7 509 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 SETSIPP0DME0 302 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 TMCO3Q6UWJ1 677 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 CCDC91Q7Z6B0 441 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 APBB1O00213 710 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 DDX12PQ92771 950 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 GCC1Q96CN9 775 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 FOXD4L1Q9NU39 408 aa6.57□□□□□ -1.36
PTPRB-202ENST00000334414 CCDC148Q8NFR7 591 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 EFCAB5A4FU69 1503 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 PPM1EQ8WY54 764 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 SMTNL1A8MU46 457 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 NOL10Q9BSC4 688 aaKnown RBP6.56□□□□□ -1.36
PTPRB-202ENST00000334414 CCDC88BA6NC98 1476 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 STIM1Q13586 685 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 NOL8Q76FK4 1167 aaKnown RBP6.56□□□□□ -1.36
PTPRB-202ENST00000334414 KIAA1328Q86T90 577 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 CCDC146Q8IYE0 955 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 SOGA1O94964 1423 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 GTPBP4Q9BZE4 634 aaKnown RBP6.56□□□□□ -1.36
PTPRB-202ENST00000334414 ATAD2Q6PL18 1390 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 SUPT6HQ7KZ85 1726 aaKnown RBP6.56□□□□□ -1.36
PTPRB-202ENST00000334414 ENOX2Q16206 610 aaKnown RBP6.56□□□□□ -1.36
PTPRB-202ENST00000334414 EHBP1L1Q8N3D4 1523 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 CEP57L1Q8IYX8 460 aa6.56□□□□□ -1.36
PTPRB-202ENST00000334414 IFIT2P09913 472 aaKnown RBP6.55□□□□□ -1.36
PTPRB-202ENST00000334414 SEPT7Q16181 437 aaKnown RBP6.55□□□□□ -1.36
PTPRB-202ENST00000334414 CNTROBQ8N137 903 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 RILPL2Q969X0 211 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 CRBNQ96SW2 442 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 EVC2Q86UK5 1308 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 SH3BGRP55822 239 aaPredicted RBP6.55□□□□□ -1.36
PTPRB-202ENST00000334414 ERC1Q8IUD2 1116 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 JAKMIP3Q5VZ66 844 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 PAXBP1Q9Y5B6 917 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 SMC2O95347 1197 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 SART3Q15020 963 aaKnown RBP6.55□□□□□ -1.36
PTPRB-202ENST00000334414 VPS37CA5D8V6 355 aaPredicted RBP6.55□□□□□ -1.36
PTPRB-202ENST00000334414 GCOM1H8Y6P7 765 aaPredicted RBP6.55□□□□□ -1.36
PTPRB-202ENST00000334414 MYZAPP0CAP1 466 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 SYCP1Q15431 976 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 CCDC83Q8IWF9 413 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 TIGD1Q96MW7 591 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 EXOC6Q8TAG9 804 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 OFD1O75665 1012 aa6.55□□□□□ -1.36
PTPRB-202ENST00000334414 DDX58O95786 925 aaKnown RBP6.54□□□□□ -1.36
PTPRB-202ENST00000334414 SSR1P43307 286 aaKnown RBP6.54□□□□□ -1.36
PTPRB-202ENST00000334414 GNAI1P63096 354 aa6.54□□□□□ -1.36
PTPRB-202ENST00000334414 PPFIBP1Q86W92 1011 aa6.54□□□□□ -1.36
PTPRB-202ENST00000334414 STAMBPO95630 424 aa6.54□□□□□ -1.36
PTPRB-202ENST00000334414 RUNDC1Q96C34 613 aa6.54□□□□□ -1.36
PTPRB-202ENST00000334414 CLASRPQ8N2M8 674 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms