RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ALS2Q96Q42 1657 aa9.62□□□□□ -0.87
USP16-201ENST00000334352 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
USP16-201ENST00000334352 ZNF772Q68DY9 489 aaPredicted RBP9.61□□□□□ -0.87
USP16-201ENST00000334352 YTHDC2Q9H6S0 1430 aaKnown RBP9.61□□□□□ -0.87
USP16-201ENST00000334352 ARHGEF28Q8N1W1 1705 aaKnown RBP9.61□□□□□ -0.87
USP16-201ENST00000334352 SBNO1A3KN83 1393 aa9.61□□□□□ -0.87
USP16-201ENST00000334352 C14orf93Q9H972 538 aaKnown RBP9.61□□□□□ -0.87
USP16-201ENST00000334352 MPHOSPH9Q99550 1183 aa9.6□□□□□ -0.87
USP16-201ENST00000334352 ATRNO75882 1429 aa9.6□□□□□ -0.87
USP16-201ENST00000334352 LRRC59Q96AG4 307 aaKnown RBP9.6□□□□□ -0.87
USP16-201ENST00000334352 USP54Q70EL1 1684 aa9.59□□□□□ -0.87
USP16-201ENST00000334352 NRAPQ86VF7 1730 aa9.59□□□□□ -0.87
USP16-201ENST00000334352 BRD4O60885 1362 aaPredicted RBP9.59□□□□□ -0.87
USP16-201ENST00000334352 SLC4A1APQ9BWU0 796 aaKnown RBP9.58□□□□□ -0.88
USP16-201ENST00000334352 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
USP16-201ENST00000334352 COL14A1Q05707 1796 aaKnown RBP9.56□□□□□ -0.88
USP16-201ENST00000334352 PLCH1Q4KWH8 1693 aa9.56□□□□□ -0.88
USP16-201ENST00000334352 SLIT2O94813 1529 aa9.56□□□□□ -0.88
USP16-201ENST00000334352 DHX57Q6P158 1386 aaKnown RBP9.56□□□□□ -0.88
USP16-201ENST00000334352 PHF23Q9BUL5 403 aaPredicted RBP9.56□□□□□ -0.88
USP16-201ENST00000334352 FNBP4Q8N3X1 1017 aaPredicted RBP9.55□□□□□ -0.88
USP16-201ENST00000334352 ATP7BP35670 1465 aa9.55□□□□□ -0.88
USP16-201ENST00000334352 RAB3GAP2Q9H2M9 1393 aa9.54□□□□□ -0.88
USP16-201ENST00000334352 ABCC6O95255 1503 aa9.54□□□□□ -0.88
USP16-201ENST00000334352 ZNF326Q5BKZ1 582 aaKnown RBP9.54□□□□□ -0.88
USP16-201ENST00000334352 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
USP16-201ENST00000334352 NPHP3Q7Z494 1330 aa9.54□□□□□ -0.88
USP16-201ENST00000334352 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
USP16-201ENST00000334352 ADGRF5Q8IZF2 1346 aa9.53□□□□□ -0.88
USP16-201ENST00000334352 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
USP16-201ENST00000334352 RGPD8O14715 1765 aaPredicted RBP9.52□□□□□ -0.88
USP16-201ENST00000334352 TNS3Q68CZ2 1445 aa9.52□□□□□ -0.89
USP16-201ENST00000334352 BCANQ96GW7 911 aa9.52□□□□□ -0.89
USP16-201ENST00000334352 PHRF1Q9P1Y6 1649 aaKnown RBP9.52□□□□□ -0.89
USP16-201ENST00000334352 ARHGEF10O15013 1369 aa9.51□□□□□ -0.89
USP16-201ENST00000334352 THSD7AQ9UPZ6 1657 aa9.51□□□□□ -0.89
USP16-201ENST00000334352 RGPD3A6NKT7 1758 aaPredicted RBP9.5□□□□□ -0.89
USP16-201ENST00000334352 RGPD4Q7Z3J3 1758 aa9.5□□□□□ -0.89
USP16-201ENST00000334352 TRPM1Q7Z4N2 1603 aa9.5□□□□□ -0.89
USP16-201ENST00000334352 TRIM52Q96A61 297 aa9.5□□□□□ -0.89
USP16-201ENST00000334352 RGS12O14924 1447 aa9.5□□□□□ -0.89
USP16-201ENST00000334352 GLI3P10071 1580 aa9.5□□□□□ -0.89
USP16-201ENST00000334352 SPATA31A3Q5VYP0 1347 aa9.49□□□□□ -0.89
USP16-201ENST00000334352 BCL9LQ86UU0 1499 aa9.49□□□□□ -0.89
USP16-201ENST00000334352 RBM6P78332 1123 aaKnown RBP9.49□□□□□ -0.89
USP16-201ENST00000334352 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
USP16-201ENST00000334352 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
USP16-201ENST00000334352 LMO7Q8WWI1 1683 aa9.48□□□□□ -0.89
USP16-201ENST00000334352 RGPD1P0DJD0 1748 aa9.48□□□□□ -0.89
USP16-201ENST00000334352 AKAP12Q02952 1782 aa9.48□□□□□ -0.89
USP16-201ENST00000334352 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
USP16-201ENST00000334352 QRICH2Q9H0J4 1663 aa9.47□□□□□ -0.89
USP16-201ENST00000334352 LRP5O75197 1615 aa9.47□□□□□ -0.89
USP16-201ENST00000334352 WNK3Q9BYP7 1800 aa9.47□□□□□ -0.89
USP16-201ENST00000334352 PSME1Q06323 249 aa9.47□□□□□ -0.89
USP16-201ENST00000334352 RXRBP28702 533 aa9.46□□□□□ -0.89
USP16-201ENST00000334352 C14orf37Q86TY3 774 aa9.46□□□□□ -0.89
USP16-201ENST00000334352 SLIT3O75094 1523 aa9.46□□□□□ -0.9
USP16-201ENST00000334352 ITGAEP38570 1179 aa9.46□□□□□ -0.9
USP16-201ENST00000334352 AFF2P51816 1311 aa9.46□□□□□ -0.9
USP16-201ENST00000334352 ATAD2Q6PL18 1390 aa9.46□□□□□ -0.9
USP16-201ENST00000334352 NRKQ7Z2Y5 1582 aa9.46□□□□□ -0.9
USP16-201ENST00000334352 PLEKHH1Q9ULM0 1364 aa9.46□□□□□ -0.9
USP16-201ENST00000334352 DISP2A7MBM2 1401 aa9.45□□□□□ -0.9
USP16-201ENST00000334352 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
USP16-201ENST00000334352 GPRASP1Q5JY77 1395 aa9.45□□□□□ -0.9
USP16-201ENST00000334352 SBNO2Q9Y2G9 1366 aa9.44□□□□□ -0.9
USP16-201ENST00000334352 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
USP16-201ENST00000334352 NGLY1Q96IV0 654 aa9.44□□□□□ -0.9
USP16-201ENST00000334352 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
USP16-201ENST00000334352 BRWD3Q6RI45 1802 aa9.43□□□□□ -0.9
USP16-201ENST00000334352 PARP4Q9UKK3 1724 aaKnown RBP9.43□□□□□ -0.9
USP16-201ENST00000334352 PUS7Q96PZ0 661 aaKnown RBP9.42□□□□□ -0.9
USP16-201ENST00000334352 MON2Q7Z3U7 1717 aa9.42□□□□□ -0.9
USP16-201ENST00000334352 CPDO75976 1380 aa9.42□□□□□ -0.9
USP16-201ENST00000334352 RALGAPBQ86X10 1494 aa9.42□□□□□ -0.9
USP16-201ENST00000334352 TNS1Q9HBL0 1735 aaKnown RBP9.42□□□□□ -0.9
USP16-201ENST00000334352 PLEKHG3A1L390 1219 aa9.42□□□□□ -0.9
USP16-201ENST00000334352 FOXD1Q16676 465 aa9.42□□□□□ -0.9
USP16-201ENST00000334352 RBM33Q96EV2 1170 aaKnown RBP9.42□□□□□ -0.9
USP16-201ENST00000334352 MEX3CQ5U5Q3 659 aaKnown RBP9.42□□□□□ -0.9
USP16-201ENST00000334352 ORAI2Q96SN7 254 aa9.42□□□□□ -0.9
USP16-201ENST00000334352 COL18A1P39060 1754 aa9.42□□□□□ -0.9
USP16-201ENST00000334352 RREB1Q92766 1687 aa9.41□□□□□ -0.9
USP16-201ENST00000334352 SSH2Q76I76 1423 aa9.41□□□□□ -0.9
USP16-201ENST00000334352 VPS72Q15906 364 aa9.41□□□□□ -0.9
USP16-201ENST00000334352 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
USP16-201ENST00000334352 BCL9O00512 1426 aa9.41□□□□□ -0.9
USP16-201ENST00000334352 USP19O94966 1318 aa9.4□□□□□ -0.91
USP16-201ENST00000334352 WASLO00401 505 aaPredicted RBP9.39□□□□□ -0.91
USP16-201ENST00000334352 PEAK1Q9H792 1746 aa9.39□□□□□ -0.91
USP16-201ENST00000334352 UNC5CLQ8IV45 518 aa9.39□□□□□ -0.91
USP16-201ENST00000334352 QTRT2Q9H974 415 aaKnown RBP9.39□□□□□ -0.91
USP16-201ENST00000334352 C11orf95C9JLR9 678 aaPredicted RBP9.39□□□□□ -0.91
USP16-201ENST00000334352 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
USP16-201ENST00000334352 KRT28Q7Z3Y7 464 aa9.39□□□□□ -0.91
USP16-201ENST00000334352 BLMP54132 1417 aaPredicted RBP9.38□□□□□ -0.91
USP16-201ENST00000334352 FAM208AQ9UK61 1670 aaKnown RBP9.38□□□□□ -0.91
USP16-201ENST00000334352 ESCO1Q5FWF5 840 aa9.37□□□□□ -0.91
USP16-201ENST00000334352 WAPLQ7Z5K2 1190 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms