RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 POGZQ7Z3K3 1410 aa14.06□□□□□ -0.16
CCDC87-201ENST00000333861 ZFYVE16Q7Z3T8 1539 aa14.06□□□□□ -0.16
CCDC87-201ENST00000333861 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
CCDC87-201ENST00000333861 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
CCDC87-201ENST00000333861 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
CCDC87-201ENST00000333861 CCDC144AA2RUR9 1427 aa14.05□□□□□ -0.16
CCDC87-201ENST00000333861 DUOX2Q9NRD8 1548 aa14.05□□□□□ -0.16
CCDC87-201ENST00000333861 PDCL3Q9H2J4 239 aa14.05□□□□□ -0.16
CCDC87-201ENST00000333861 ZHX1Q9UKY1 873 aaPredicted RBP14.05□□□□□ -0.16
CCDC87-201ENST00000333861 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 PRDM4Q9UKN5 801 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 RTEL1-TNFRSF6BF6WH68 1400 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 NEO1Q92859 1461 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 PRAG1Q86YV5 1406 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 MAP3K4Q9Y6R4 1608 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 C22orf23Q9BZE7 217 aa14.04□□□□□ -0.16
CCDC87-201ENST00000333861 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
CCDC87-201ENST00000333861 R3HCC1Q9Y3T6 440 aaKnown RBP14.03□□□□□ -0.16
CCDC87-201ENST00000333861 NCLP19338 710 aaKnown RBP14.03□□□□□ -0.16
CCDC87-201ENST00000333861 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
CCDC87-201ENST00000333861 WWC1Q8IX03 1113 aa14.02□□□□□ -0.16
CCDC87-201ENST00000333861 CD2BP2O95400 341 aaKnown RBP14.02□□□□□ -0.17
CCDC87-201ENST00000333861 RIPK4P57078 832 aa14.02□□□□□ -0.17
CCDC87-201ENST00000333861 FOXD4L5Q5VV16 416 aaPredicted RBP14.02□□□□□ -0.17
CCDC87-201ENST00000333861 FOXD4L4Q8WXT5 416 aaPredicted RBP14.02□□□□□ -0.17
CCDC87-201ENST00000333861 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
CCDC87-201ENST00000333861 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
CCDC87-201ENST00000333861 GLI2P10070 1586 aa14.01□□□□□ -0.17
CCDC87-201ENST00000333861 CARD14Q9BXL6 1004 aa14.01□□□□□ -0.17
CCDC87-201ENST00000333861 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
CCDC87-201ENST00000333861 C1orf115Q9H7X2 142 aa14.01□□□□□ -0.17
CCDC87-201ENST00000333861 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
CCDC87-201ENST00000333861 YEATS2Q9ULM3 1422 aa14□□□□□ -0.17
CCDC87-201ENST00000333861 JARID2Q92833 1246 aaPredicted RBP14□□□□□ -0.17
CCDC87-201ENST00000333861 LNPKQ9C0E8 428 aa14□□□□□ -0.17
CCDC87-201ENST00000333861 INO80Q9ULG1 1556 aaPredicted RBP13.99□□□□□ -0.17
CCDC87-201ENST00000333861 RARSP54136 660 aaKnown RBP13.99□□□□□ -0.17
CCDC87-201ENST00000333861 SAFB2Q14151 953 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC87-201ENST00000333861 A2MP01023 1474 aa13.99□□□□□ -0.17
CCDC87-201ENST00000333861 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
CCDC87-201ENST00000333861 MAPK8IP3Q9UPT6 1336 aa13.99□□□□□ -0.17
CCDC87-201ENST00000333861 E9PSI1 815 aa13.99□□□□□ -0.17
CCDC87-201ENST00000333861 TCP11L2Q8N4U5 519 aa13.99□□□□□ -0.17
CCDC87-201ENST00000333861 E9PCH4 1651 aa13.99□□□□□ -0.17
CCDC87-201ENST00000333861 TPM2P07951 284 aa13.98□□□□□ -0.17
CCDC87-201ENST00000333861 ITPRIPQ8IWB1 547 aa13.98□□□□□ -0.17
CCDC87-201ENST00000333861 NKTRP30414 1462 aaKnown RBP13.98□□□□□ -0.17
CCDC87-201ENST00000333861 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
CCDC87-201ENST00000333861 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
CCDC87-201ENST00000333861 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
CCDC87-201ENST00000333861 MLECQ14165 292 aa13.98□□□□□ -0.17
CCDC87-201ENST00000333861 TNPO1Q92973 898 aaKnown RBP13.98□□□□□ -0.17
CCDC87-201ENST00000333861 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
CCDC87-201ENST00000333861 FTSJ3Q8IY81 847 aaKnown RBP13.97□□□□□ -0.17
CCDC87-201ENST00000333861 TRMT2AQ8IZ69 625 aaKnown RBP13.97□□□□□ -0.17
CCDC87-201ENST00000333861 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.17
CCDC87-201ENST00000333861 KANK1Q14678 1352 aa13.96□□□□□ -0.17
CCDC87-201ENST00000333861 MLH3Q9UHC1 1453 aa13.96□□□□□ -0.17
CCDC87-201ENST00000333861 CGNL1Q0VF96 1302 aa13.96□□□□□ -0.17
CCDC87-201ENST00000333861 HSP90AB1P08238 724 aaKnown RBP13.96□□□□□ -0.18
CCDC87-201ENST00000333861 KIF13AQ9H1H9 1805 aa13.95□□□□□ -0.18
CCDC87-201ENST00000333861 SSFA2P28290 1259 aa13.95□□□□□ -0.18
CCDC87-201ENST00000333861 FOXD4L6Q3SYB3 417 aaPredicted RBP13.95□□□□□ -0.18
CCDC87-201ENST00000333861 FOXD4L3Q6VB84 417 aaPredicted RBP13.95□□□□□ -0.18
CCDC87-201ENST00000333861 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
CCDC87-201ENST00000333861 PLA2R1Q13018 1463 aa13.95□□□□□ -0.18
CCDC87-201ENST00000333861 HECW2Q9P2P5 1572 aa13.95□□□□□ -0.18
CCDC87-201ENST00000333861 AAMPQ13685 434 aa13.95□□□□□ -0.18
CCDC87-201ENST00000333861 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
CCDC87-201ENST00000333861 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
CCDC87-201ENST00000333861 SLC12A5Q9H2X9 1139 aa13.94□□□□□ -0.18
CCDC87-201ENST00000333861 KDM5DQ9BY66 1539 aa13.94□□□□□ -0.18
CCDC87-201ENST00000333861 MSNP26038 577 aaKnown RBP13.94□□□□□ -0.18
CCDC87-201ENST00000333861 PPRC1Q5VV67 1664 aaKnown RBP13.94□□□□□ -0.18
CCDC87-201ENST00000333861 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
CCDC87-201ENST00000333861 APBB1O00213 710 aa13.93□□□□□ -0.18
CCDC87-201ENST00000333861 FBLN1P23142 703 aa13.93□□□□□ -0.18
CCDC87-201ENST00000333861 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
CCDC87-201ENST00000333861 TSC1Q92574 1164 aa13.93□□□□□ -0.18
CCDC87-201ENST00000333861 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
CCDC87-201ENST00000333861 ABCA6Q8N139 1617 aa13.92□□□□□ -0.18
CCDC87-201ENST00000333861 FAM177BA6PVY3 158 aa13.92□□□□□ -0.18
CCDC87-201ENST00000333861 U2SURPO15042 1029 aaKnown RBP13.92□□□□□ -0.18
CCDC87-201ENST00000333861 DTNBO60941 627 aa13.92□□□□□ -0.18
CCDC87-201ENST00000333861 UNC13BO14795 1591 aa13.92□□□□□ -0.18
CCDC87-201ENST00000333861 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
CCDC87-201ENST00000333861 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
CCDC87-201ENST00000333861 UQCRHLA0A096LP55 91 aa13.91□□□□□ -0.18
CCDC87-201ENST00000333861 UQCRHP07919 91 aa13.91□□□□□ -0.18
CCDC87-201ENST00000333861 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
CCDC87-201ENST00000333861 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC87-201ENST00000333861 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
CCDC87-201ENST00000333861 RWDD1Q9H446 243 aaPredicted RBP13.91□□□□□ -0.18
CCDC87-201ENST00000333861 RICTORQ6R327 1708 aa13.91□□□□□ -0.18
CCDC87-201ENST00000333861 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
CCDC87-201ENST00000333861 PKP1Q13835 747 aa13.91□□□□□ -0.18
CCDC87-201ENST00000333861 RBM27Q9P2N5 1060 aaKnown RBP13.91□□□□□ -0.18
CCDC87-201ENST00000333861 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
CCDC87-201ENST00000333861 PDE3AQ14432 1141 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms