RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 PDE3AQ14432 1141 aa23.3■■□□□ 1.32
TRIM50-201ENST00000333149 CENPJQ9HC77 1338 aaPredicted RBP23.3■■□□□ 1.32
TRIM50-201ENST00000333149 NEFMP07197 916 aa23.29■■□□□ 1.32
TRIM50-201ENST00000333149 ZC3H13Q5T200 1668 aaKnown RBP23.28■■□□□ 1.32
TRIM50-201ENST00000333149 NOS1P29475 1434 aa23.28■■□□□ 1.32
TRIM50-201ENST00000333149 BCAR3O75815 825 aa23.28■■□□□ 1.32
TRIM50-201ENST00000333149 C14orf93Q9H972 538 aaKnown RBP23.28■■□□□ 1.32
TRIM50-201ENST00000333149 LAS1LQ9Y4W2 734 aaKnown RBP23.28■■□□□ 1.32
TRIM50-201ENST00000333149 GGT6Q6P531 493 aa23.26■■□□□ 1.31
TRIM50-201ENST00000333149 DMRT2Q9Y5R5 561 aa23.26■■□□□ 1.31
TRIM50-201ENST00000333149 PPLO60437 1756 aa23.26■■□□□ 1.31
TRIM50-201ENST00000333149 CGNL1Q0VF96 1302 aa23.26■■□□□ 1.31
TRIM50-201ENST00000333149 SHPRHQ149N8 1683 aa23.26■■□□□ 1.31
TRIM50-201ENST00000333149 WWC1Q8IX03 1113 aa23.26■■□□□ 1.31
TRIM50-201ENST00000333149 USP32Q8NFA0 1604 aa23.25■■□□□ 1.31
TRIM50-201ENST00000333149 ADGRB1O14514 1584 aa23.25■■□□□ 1.31
TRIM50-201ENST00000333149 RPGRIP1LQ68CZ1 1315 aa23.24■■□□□ 1.31
TRIM50-201ENST00000333149 PUS7Q96PZ0 661 aaKnown RBP23.24■■□□□ 1.31
TRIM50-201ENST00000333149 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
TRIM50-201ENST00000333149 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
TRIM50-201ENST00000333149 NSD3Q9BZ95 1437 aa23.23■■□□□ 1.31
TRIM50-201ENST00000333149 NPATQ14207 1427 aa23.22■■□□□ 1.31
TRIM50-201ENST00000333149 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
TRIM50-201ENST00000333149 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
TRIM50-201ENST00000333149 IQSEC2Q5JU85 1478 aa23.2■■□□□ 1.3
TRIM50-201ENST00000333149 AAMPQ13685 434 aa23.2■■□□□ 1.3
TRIM50-201ENST00000333149 MORC1Q86VD1 984 aa23.2■■□□□ 1.3
TRIM50-201ENST00000333149 IGHDP01880 384 aa23.18■■□□□ 1.3
TRIM50-201ENST00000333149 WDR63Q8IWG1 891 aa23.18■■□□□ 1.3
TRIM50-201ENST00000333149 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
TRIM50-201ENST00000333149 CCDC27Q2M243 656 aa23.17■■□□□ 1.3
TRIM50-201ENST00000333149 SLC12A5Q9H2X9 1139 aa23.17■■□□□ 1.3
TRIM50-201ENST00000333149 CLUAP1Q96AJ1 413 aa23.16■■□□□ 1.3
TRIM50-201ENST00000333149 TRAK1Q9UPV9 953 aa23.16■■□□□ 1.3
TRIM50-201ENST00000333149 VIRMAQ69YN4 1812 aaKnown RBP23.16■■□□□ 1.3
TRIM50-201ENST00000333149 RGS3P49796 1198 aa23.16■■□□□ 1.3
TRIM50-201ENST00000333149 ARHGEF40Q8TER5 1519 aa23.15■■□□□ 1.3
TRIM50-201ENST00000333149 AGLP35573 1532 aa23.14■■□□□ 1.29
TRIM50-201ENST00000333149 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
TRIM50-201ENST00000333149 RARSP54136 660 aaKnown RBP23.13■■□□□ 1.29
TRIM50-201ENST00000333149 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
TRIM50-201ENST00000333149 DAXXQ9UER7 740 aaPredicted RBP23.13■■□□□ 1.29
TRIM50-201ENST00000333149 NSD2O96028 1365 aa23.13■■□□□ 1.29
TRIM50-201ENST00000333149 ABCC3O15438 1527 aa23.13■■□□□ 1.29
TRIM50-201ENST00000333149 CHGAP10645 457 aaKnown RBP23.11■■□□□ 1.29
TRIM50-201ENST00000333149 NFKBIBQ15653 356 aa23.11■■□□□ 1.29
TRIM50-201ENST00000333149 ZMYM3Q14202 1370 aa23.1■■□□□ 1.29
TRIM50-201ENST00000333149 PANK1Q8TE04 598 aa23.09■■□□□ 1.29
TRIM50-201ENST00000333149 COG6Q9Y2V7 657 aa23.09■■□□□ 1.29
TRIM50-201ENST00000333149 PIK3C2BO00750 1634 aa23.09■■□□□ 1.29
TRIM50-201ENST00000333149 SLC4A3P48751 1232 aa23.09■■□□□ 1.29
TRIM50-201ENST00000333149 MTHFSP49914 203 aa23.09■■□□□ 1.29
TRIM50-201ENST00000333149 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
TRIM50-201ENST00000333149 ANKRD36BQ8N2N9 1353 aa23.09■■□□□ 1.29
TRIM50-201ENST00000333149 TMEM132EQ6IEE7 984 aa23.08■■□□□ 1.29
TRIM50-201ENST00000333149 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.28
TRIM50-201ENST00000333149 USP19O94966 1318 aa23.08■■□□□ 1.28
TRIM50-201ENST00000333149 CFAP65Q6ZU64 1925 aaKnown RBP23.07■■□□□ 1.28
TRIM50-201ENST00000333149 CANXP27824 592 aaKnown RBP23.07■■□□□ 1.28
TRIM50-201ENST00000333149 EVC2Q86UK5 1308 aa23.07■■□□□ 1.28
TRIM50-201ENST00000333149 ARHGEF28Q8N1W1 1705 aaKnown RBP23.06■■□□□ 1.28
TRIM50-201ENST00000333149 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
TRIM50-201ENST00000333149 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
TRIM50-201ENST00000333149 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
TRIM50-201ENST00000333149 CAMSAP1Q5T5Y3 1602 aa23.06■■□□□ 1.28
TRIM50-201ENST00000333149 VGFO15240 615 aaPredicted RBP23.04■■□□□ 1.28
TRIM50-201ENST00000333149 NEXMIFQ5QGS0 1516 aa23.04■■□□□ 1.28
TRIM50-201ENST00000333149 ADGRB2O60241 1585 aa23.04■■□□□ 1.28
TRIM50-201ENST00000333149 TNNT2P45379 298 aaPredicted RBP23.04■■□□□ 1.28
TRIM50-201ENST00000333149 RRP7AQ9Y3A4 280 aaKnown RBP23.04■■□□□ 1.28
TRIM50-201ENST00000333149 GSE1Q14687 1217 aa23.03■■□□□ 1.28
TRIM50-201ENST00000333149 NEUROD2Q15784 382 aa23.03■■□□□ 1.28
TRIM50-201ENST00000333149 ZFYVE9O95405 1425 aa23.02■■□□□ 1.28
TRIM50-201ENST00000333149 ARHGAP31Q2M1Z3 1444 aa23.02■■□□□ 1.28
TRIM50-201ENST00000333149 MLECQ14165 292 aa23.02■■□□□ 1.28
TRIM50-201ENST00000333149 FRAT1Q92837 279 aaPredicted RBP23.01■■□□□ 1.27
TRIM50-201ENST00000333149 MYH16Q9H6N6 1097 aa23.01■■□□□ 1.27
TRIM50-201ENST00000333149 CT47B1P0C2W7 299 aaPredicted RBP23.01■■□□□ 1.27
TRIM50-201ENST00000333149 RLBP1P12271 317 aa22.99■■□□□ 1.27
TRIM50-201ENST00000333149 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
TRIM50-201ENST00000333149 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
TRIM50-201ENST00000333149 ABCC11Q96J66 1382 aa22.97■■□□□ 1.27
TRIM50-201ENST00000333149 SEC24BO95487 1268 aa22.95■■□□□ 1.26
TRIM50-201ENST00000333149 RWDD1Q9H446 243 aaPredicted RBP22.94■■□□□ 1.26
TRIM50-201ENST00000333149 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
TRIM50-201ENST00000333149 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
TRIM50-201ENST00000333149 TNNQ9UQP3 1299 aa22.94■■□□□ 1.26
TRIM50-201ENST00000333149 MED14O60244 1454 aa22.93■■□□□ 1.26
TRIM50-201ENST00000333149 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
TRIM50-201ENST00000333149 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
TRIM50-201ENST00000333149 CLTCQ00610 1675 aaKnown RBP22.92■■□□□ 1.26
TRIM50-201ENST00000333149 COL3A1P02461 1466 aaPredicted RBP22.92■■□□□ 1.26
TRIM50-201ENST00000333149 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
TRIM50-201ENST00000333149 PDZRN3Q9UPQ7 1066 aa22.92■■□□□ 1.26
TRIM50-201ENST00000333149 ZKSCAN2Q63HK3 967 aa22.91■■□□□ 1.26
TRIM50-201ENST00000333149 SLC52A1Q9NWF4 448 aa22.91■■□□□ 1.26
TRIM50-201ENST00000333149 BECN1Q14457 450 aa22.91■■□□□ 1.26
TRIM50-201ENST00000333149 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
TRIM50-201ENST00000333149 A0A1W2PP64 1363 aa22.9■■□□□ 1.26
TRIM50-201ENST00000333149 FRAT2O75474 233 aaPredicted RBP22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms