RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 CCDC173Q0VFZ6 552 aa22.65■■□□□ 1.22
CDHR1-201ENST00000332904 R3HCC1Q9Y3T6 440 aaKnown RBP22.65■■□□□ 1.22
CDHR1-201ENST00000332904 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
CDHR1-201ENST00000332904 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.21
CDHR1-201ENST00000332904 CALD1Q05682 793 aaKnown RBP22.64■■□□□ 1.21
CDHR1-201ENST00000332904 MSNP26038 577 aaKnown RBP22.63■■□□□ 1.21
CDHR1-201ENST00000332904 AAMPQ13685 434 aa22.63■■□□□ 1.21
CDHR1-201ENST00000332904 SMC5Q8IY18 1101 aa22.63■■□□□ 1.21
CDHR1-201ENST00000332904 MYOM1P52179 1685 aa22.63■■□□□ 1.21
CDHR1-201ENST00000332904 PPP1R9BQ96SB3 815 aa22.63■■□□□ 1.21
CDHR1-201ENST00000332904 SSFA2P28290 1259 aa22.62■■□□□ 1.21
CDHR1-201ENST00000332904 NPC1L1Q9UHC9 1359 aa22.62■■□□□ 1.21
CDHR1-201ENST00000332904 NGEFQ8N5V2 710 aa22.61■■□□□ 1.21
CDHR1-201ENST00000332904 RBM42Q9BTD8 480 aaKnown RBP22.61■■□□□ 1.21
CDHR1-201ENST00000332904 SKOR2Q2VWA4 1001 aaPredicted RBP22.6■■□□□ 1.21
CDHR1-201ENST00000332904 DZIP1LQ8IYY4 767 aaKnown RBP22.6■■□□□ 1.21
CDHR1-201ENST00000332904 RBM25P49756 843 aaKnown RBP22.58■■□□□ 1.21
CDHR1-201ENST00000332904 XPCQ01831 940 aaPredicted RBP22.58■■□□□ 1.21
CDHR1-201ENST00000332904 ZKSCAN2Q63HK3 967 aa22.58■■□□□ 1.21
CDHR1-201ENST00000332904 ITPRIPQ8IWB1 547 aa22.58■■□□□ 1.21
CDHR1-201ENST00000332904 SNX21Q969T3 373 aa22.58■■□□□ 1.21
CDHR1-201ENST00000332904 RUNDC1Q96C34 613 aa22.58■■□□□ 1.21
CDHR1-201ENST00000332904 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.58■■□□□ 1.2
CDHR1-201ENST00000332904 DDX49Q9Y6V7 483 aaKnown RBP22.58■■□□□ 1.2
CDHR1-201ENST00000332904 IQGAP1P46940 1657 aa22.58■■□□□ 1.2
CDHR1-201ENST00000332904 ANP32BQ92688 251 aaKnown RBP22.57■■□□□ 1.2
CDHR1-201ENST00000332904 TSR2Q969E8 191 aaKnown RBP22.57■■□□□ 1.2
CDHR1-201ENST00000332904 LNPKQ9C0E8 428 aa22.57■■□□□ 1.2
CDHR1-201ENST00000332904 FBLN2P98095 1184 aa22.57■■□□□ 1.2
CDHR1-201ENST00000332904 AK9Q5TCS8 1911 aa22.57■■□□□ 1.2
CDHR1-201ENST00000332904 ATP10BO94823 1461 aa22.57■■□□□ 1.2
CDHR1-201ENST00000332904 KIF2CQ99661 725 aa22.56■■□□□ 1.2
CDHR1-201ENST00000332904 CIZ1Q9ULV3 898 aaPredicted RBP22.56■■□□□ 1.2
CDHR1-201ENST00000332904 SCAF11Q99590 1463 aaKnown RBP22.56■■□□□ 1.2
CDHR1-201ENST00000332904 ARHGEF5Q12774 1597 aa22.56■■□□□ 1.2
CDHR1-201ENST00000332904 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
CDHR1-201ENST00000332904 TRIM27P14373 513 aa22.54■■□□□ 1.2
CDHR1-201ENST00000332904 SAMD9LQ8IVG5 1584 aa22.54■■□□□ 1.2
CDHR1-201ENST00000332904 GAS2L2Q8NHY3 880 aa22.54■■□□□ 1.2
CDHR1-201ENST00000332904 NCLP19338 710 aaKnown RBP22.54■■□□□ 1.2
CDHR1-201ENST00000332904 SMC4Q9NTJ3 1288 aa22.54■■□□□ 1.2
CDHR1-201ENST00000332904 A0A0U1RQG5 324 aaPredicted RBP22.53■■□□□ 1.2
CDHR1-201ENST00000332904 MADDQ8WXG6 1647 aa22.53■■□□□ 1.2
CDHR1-201ENST00000332904 POLR3AO14802 1390 aaPredicted RBP22.53■■□□□ 1.2
CDHR1-201ENST00000332904 UQCRHLA0A096LP55 91 aa22.53■■□□□ 1.2
CDHR1-201ENST00000332904 UQCRHP07919 91 aa22.53■■□□□ 1.2
CDHR1-201ENST00000332904 HDAC1Q13547 482 aaPredicted RBP22.53■■□□□ 1.2
CDHR1-201ENST00000332904 WDR63Q8IWG1 891 aa22.53■■□□□ 1.2
CDHR1-201ENST00000332904 PHF23Q9BUL5 403 aaPredicted RBP22.53■■□□□ 1.2
CDHR1-201ENST00000332904 PRDM10Q9NQV6 1147 aa22.52■■□□□ 1.2
CDHR1-201ENST00000332904 UNC13BO14795 1591 aa22.52■■□□□ 1.2
CDHR1-201ENST00000332904 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.51■■□□□ 1.19
CDHR1-201ENST00000332904 MORC1Q86VD1 984 aa22.51■■□□□ 1.19
CDHR1-201ENST00000332904 BAG4O95429 457 aaKnown RBP22.5■■□□□ 1.19
CDHR1-201ENST00000332904 CAVIN1Q6NZI2 390 aaKnown RBP22.5■■□□□ 1.19
CDHR1-201ENST00000332904 KLHL40Q2TBA0 621 aa22.5■■□□□ 1.19
CDHR1-201ENST00000332904 K7ELQ4 463 aaPredicted RBP22.49■■□□□ 1.19
CDHR1-201ENST00000332904 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
CDHR1-201ENST00000332904 SYCP2Q9BX26 1530 aa22.49■■□□□ 1.19
CDHR1-201ENST00000332904 ABCA8O94911 1581 aa22.49■■□□□ 1.19
CDHR1-201ENST00000332904 ZBTB7CA1YPR0 619 aa22.48■■□□□ 1.19
CDHR1-201ENST00000332904 RBSNQ9H1K0 784 aa22.48■■□□□ 1.19
CDHR1-201ENST00000332904 GOLGA6L22H0YM25 854 aa22.48■■□□□ 1.19
CDHR1-201ENST00000332904 MCTP1Q6DN14 999 aa22.48■■□□□ 1.19
CDHR1-201ENST00000332904 SSH1Q8WYL5 1049 aa22.48■■□□□ 1.19
CDHR1-201ENST00000332904 KDM5AP29375 1690 aaKnown RBP22.48■■□□□ 1.19
CDHR1-201ENST00000332904 IQSEC2Q5JU85 1478 aa22.48■■□□□ 1.19
CDHR1-201ENST00000332904 EXOSC9Q06265 439 aaKnown RBP22.47■■□□□ 1.19
CDHR1-201ENST00000332904 TMEM57Q8N5G2 664 aa22.47■■□□□ 1.19
CDHR1-201ENST00000332904 CEP152O94986 1710 aa22.47■■□□□ 1.19
CDHR1-201ENST00000332904 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
CDHR1-201ENST00000332904 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
CDHR1-201ENST00000332904 SHPRHQ149N8 1683 aa22.47■■□□□ 1.19
CDHR1-201ENST00000332904 CFAP70Q5T0N1 1121 aa22.46■■□□□ 1.19
CDHR1-201ENST00000332904 ZHX1Q9UKY1 873 aaPredicted RBP22.46■■□□□ 1.19
CDHR1-201ENST00000332904 MTHFSP49914 203 aa22.45■■□□□ 1.19
CDHR1-201ENST00000332904 NOB1Q9ULX3 412 aaKnown RBP22.45■■□□□ 1.19
CDHR1-201ENST00000332904 DDX19BQ9UMR2 479 aa22.45■■□□□ 1.19
CDHR1-201ENST00000332904 NOL7Q9UMY1 257 aaKnown RBP22.45■■□□□ 1.19
CDHR1-201ENST00000332904 ZSCAN23Q3MJ62 389 aa22.45■■□□□ 1.18
CDHR1-201ENST00000332904 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.18
CDHR1-201ENST00000332904 ERVK-7P63135 1459 aa22.45■■□□□ 1.18
CDHR1-201ENST00000332904 PTMSP20962 102 aa22.44■■□□□ 1.18
CDHR1-201ENST00000332904 TERF1P54274 439 aa22.44■■□□□ 1.18
CDHR1-201ENST00000332904 NUCB1Q02818 461 aa22.44■■□□□ 1.18
CDHR1-201ENST00000332904 SCAPERQ9BY12 1400 aa22.44■■□□□ 1.18
CDHR1-201ENST00000332904 ATP10AO60312 1499 aa22.44■■□□□ 1.18
CDHR1-201ENST00000332904 PRIM1P49642 420 aaKnown RBP22.44■■□□□ 1.18
CDHR1-201ENST00000332904 PKP1Q13835 747 aa22.44■■□□□ 1.18
CDHR1-201ENST00000332904 CARMIL2Q6F5E8 1435 aa22.43■■□□□ 1.18
CDHR1-201ENST00000332904 ATF7IPQ6VMQ6 1270 aa22.43■■□□□ 1.18
CDHR1-201ENST00000332904 RBM27Q9P2N5 1060 aaKnown RBP22.43■■□□□ 1.18
CDHR1-201ENST00000332904 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
CDHR1-201ENST00000332904 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.18
CDHR1-201ENST00000332904 RSPH4AQ5TD94 716 aa22.42■■□□□ 1.18
CDHR1-201ENST00000332904 CHD1LQ86WJ1 897 aa22.42■■□□□ 1.18
CDHR1-201ENST00000332904 MAP7D2Q96T17 732 aa22.42■■□□□ 1.18
CDHR1-201ENST00000332904 ZBTB40Q9NUA8 1239 aa22.42■■□□□ 1.18
CDHR1-201ENST00000332904 TBC1D9Q6ZT07 1266 aa22.42■■□□□ 1.18
CDHR1-201ENST00000332904 CHAMP1Q96JM3 812 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms