RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 CARD11Q9BXL7 1154 aa22.83■■□□□ 1.25
LRRC28-202ENST00000331450 MSH6P52701 1360 aa22.8■■□□□ 1.24
LRRC28-202ENST00000331450 EIF3AQ14152 1382 aaKnown RBP22.8■■□□□ 1.24
LRRC28-202ENST00000331450 CENPJQ9HC77 1338 aaPredicted RBP22.77■■□□□ 1.24
LRRC28-202ENST00000331450 USP47Q96K76 1375 aa22.76■■□□□ 1.23
LRRC28-202ENST00000331450 C19orf44Q9H6X5 657 aa22.76■■□□□ 1.23
LRRC28-202ENST00000331450 POGKQ9P215 609 aa22.76■■□□□ 1.23
LRRC28-202ENST00000331450 SBNO2Q9Y2G9 1366 aa22.76■■□□□ 1.23
LRRC28-202ENST00000331450 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
LRRC28-202ENST00000331450 TULP4Q9NRJ4 1543 aa22.75■■□□□ 1.23
LRRC28-202ENST00000331450 RGPD8O14715 1765 aaPredicted RBP22.74■■□□□ 1.23
LRRC28-202ENST00000331450 SAFB2Q14151 953 aaKnown RBP eCLIP22.74■■□□□ 1.23
LRRC28-202ENST00000331450 C14orf37Q86TY3 774 aa22.74■■□□□ 1.23
LRRC28-202ENST00000331450 MST1RQ04912 1400 aa22.73■■□□□ 1.23
LRRC28-202ENST00000331450 MINK1Q8N4C8 1332 aaPredicted RBP22.71■■□□□ 1.23
LRRC28-202ENST00000331450 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
LRRC28-202ENST00000331450 ITSN1Q15811 1721 aa22.7■■□□□ 1.22
LRRC28-202ENST00000331450 ROBO1Q9Y6N7 1651 aa22.69■■□□□ 1.22
LRRC28-202ENST00000331450 CADPS2Q86UW7 1296 aa22.69■■□□□ 1.22
LRRC28-202ENST00000331450 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
LRRC28-202ENST00000331450 ATF3P18847 181 aa22.67■■□□□ 1.22
LRRC28-202ENST00000331450 HIRIP3Q9BW71 556 aaPredicted RBP22.67■■□□□ 1.22
LRRC28-202ENST00000331450 C1orf167Q5SNV9 1468 aa22.66■■□□□ 1.22
LRRC28-202ENST00000331450 ST20-MTHFSA0A0A6YYL1 179 aa22.66■■□□□ 1.22
LRRC28-202ENST00000331450 TESK2Q96S53 571 aa22.66■■□□□ 1.22
LRRC28-202ENST00000331450 ATP7BP35670 1465 aa22.66■■□□□ 1.22
LRRC28-202ENST00000331450 ANKARQ7Z5J8 1434 aa22.65■■□□□ 1.22
LRRC28-202ENST00000331450 KIF1AQ12756 1690 aa22.65■■□□□ 1.22
LRRC28-202ENST00000331450 UBAP1LF5GYI3 381 aa22.64■■□□□ 1.21
LRRC28-202ENST00000331450 WASLO00401 505 aaPredicted RBP22.64■■□□□ 1.21
LRRC28-202ENST00000331450 TOM1O60784 492 aa22.64■■□□□ 1.21
LRRC28-202ENST00000331450 NHSL1Q5SYE7 1610 aa22.63■■□□□ 1.21
LRRC28-202ENST00000331450 EIF4G2P78344 907 aaKnown RBP eCLIP22.62■■□□□ 1.21
LRRC28-202ENST00000331450 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
LRRC28-202ENST00000331450 HSPA5P11021 654 aaKnown RBP22.6■■□□□ 1.21
LRRC28-202ENST00000331450 PRR36Q9H6K5 1346 aa22.59■■□□□ 1.21
LRRC28-202ENST00000331450 EVC2Q86UK5 1308 aa22.58■■□□□ 1.21
LRRC28-202ENST00000331450 CDK19Q9BWU1 502 aa22.58■■□□□ 1.21
LRRC28-202ENST00000331450 AHDC1Q5TGY3 1603 aaPredicted RBP22.57■■□□□ 1.2
LRRC28-202ENST00000331450 DISP3Q9P2K9 1392 aa22.57■■□□□ 1.2
LRRC28-202ENST00000331450 MYOM1P52179 1685 aa22.56■■□□□ 1.2
LRRC28-202ENST00000331450 NUTM2FA1L443 756 aa22.55■■□□□ 1.2
LRRC28-202ENST00000331450 SLC24A1O60721 1099 aa22.54■■□□□ 1.2
LRRC28-202ENST00000331450 BRINP3Q76B58 766 aa22.54■■□□□ 1.2
LRRC28-202ENST00000331450 FBXO41Q8TF61 875 aa22.54■■□□□ 1.2
LRRC28-202ENST00000331450 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
LRRC28-202ENST00000331450 AKAP12Q02952 1782 aa22.53■■□□□ 1.2
LRRC28-202ENST00000331450 PIP4K2BP78356 416 aa22.52■■□□□ 1.2
LRRC28-202ENST00000331450 SRPK2P78362 688 aaKnown RBP22.52■■□□□ 1.2
LRRC28-202ENST00000331450 NUDT16Q96DE0 195 aaKnown RBP22.52■■□□□ 1.2
LRRC28-202ENST00000331450 ORAI2Q96SN7 254 aa22.52■■□□□ 1.2
LRRC28-202ENST00000331450 CABP2Q9NPB3 220 aa22.52■■□□□ 1.2
LRRC28-202ENST00000331450 COL16A1Q07092 1604 aaPredicted RBP22.52■■□□□ 1.2
LRRC28-202ENST00000331450 PUS7Q96PZ0 661 aaKnown RBP22.51■■□□□ 1.19
LRRC28-202ENST00000331450 ATAD2Q6PL18 1390 aa22.5■■□□□ 1.19
LRRC28-202ENST00000331450 TMF1P82094 1093 aa22.5■■□□□ 1.19
LRRC28-202ENST00000331450 PPIP5K1Q6PFW1 1433 aa22.49■■□□□ 1.19
LRRC28-202ENST00000331450 TRPM3Q9HCF6 1732 aaPredicted RBP22.49■■□□□ 1.19
LRRC28-202ENST00000331450 MON2Q7Z3U7 1717 aa22.48■■□□□ 1.19
LRRC28-202ENST00000331450 ESCO1Q5FWF5 840 aa22.48■■□□□ 1.19
LRRC28-202ENST00000331450 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
LRRC28-202ENST00000331450 PXDNQ92626 1479 aa22.47■■□□□ 1.19
LRRC28-202ENST00000331450 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
LRRC28-202ENST00000331450 PHF8Q9UPP1 1060 aa22.46■■□□□ 1.19
LRRC28-202ENST00000331450 POLR3AO14802 1390 aaPredicted RBP22.46■■□□□ 1.19
LRRC28-202ENST00000331450 NRKQ7Z2Y5 1582 aa22.46■■□□□ 1.19
LRRC28-202ENST00000331450 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
LRRC28-202ENST00000331450 CD163L1Q9NR16 1453 aa22.44■■□□□ 1.18
LRRC28-202ENST00000331450 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
LRRC28-202ENST00000331450 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
LRRC28-202ENST00000331450 CDCA8Q53HL2 280 aa22.42■■□□□ 1.18
LRRC28-202ENST00000331450 NPHP3Q7Z494 1330 aa22.41■■□□□ 1.18
LRRC28-202ENST00000331450 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
LRRC28-202ENST00000331450 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
LRRC28-202ENST00000331450 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
LRRC28-202ENST00000331450 SHPRHQ149N8 1683 aa22.4■■□□□ 1.18
LRRC28-202ENST00000331450 SOS2Q07890 1332 aaPredicted RBP22.4■■□□□ 1.18
LRRC28-202ENST00000331450 DDX17Q92841 729 aaKnown RBP22.4■■□□□ 1.18
LRRC28-202ENST00000331450 FOXO3O43524 673 aa22.39■■□□□ 1.17
LRRC28-202ENST00000331450 CABP1Q9NZU7 370 aa22.39■■□□□ 1.17
LRRC28-202ENST00000331450 ACEP12821 1306 aa22.38■■□□□ 1.17
LRRC28-202ENST00000331450 COL22A1Q8NFW1 1626 aaPredicted RBP22.37■■□□□ 1.17
LRRC28-202ENST00000331450 USP6P35125 1406 aa22.37■■□□□ 1.17
LRRC28-202ENST00000331450 KIF7Q2M1P5 1343 aa22.36■■□□□ 1.17
LRRC28-202ENST00000331450 HSPA1LP34931 641 aa22.36■■□□□ 1.17
LRRC28-202ENST00000331450 CRYBG1Q9Y4K1 1723 aa22.35■■□□□ 1.17
LRRC28-202ENST00000331450 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
LRRC28-202ENST00000331450 SLC12A5Q9H2X9 1139 aa22.35■■□□□ 1.17
LRRC28-202ENST00000331450 CCDC7Q96M83 1385 aa22.35■■□□□ 1.17
LRRC28-202ENST00000331450 SSH2Q76I76 1423 aa22.34■■□□□ 1.17
LRRC28-202ENST00000331450 A0A1W2PP64 1363 aa22.34■■□□□ 1.17
LRRC28-202ENST00000331450 SBNO1A3KN83 1393 aa22.34■■□□□ 1.17
LRRC28-202ENST00000331450 ABCA3Q99758 1704 aa22.34■■□□□ 1.17
LRRC28-202ENST00000331450 PIK3C2AO00443 1686 aa22.33■■□□□ 1.17
LRRC28-202ENST00000331450 USP54Q70EL1 1684 aa22.33■■□□□ 1.17
LRRC28-202ENST00000331450 MARF1Q9Y4F3 1742 aaKnown RBP22.33■■□□□ 1.17
LRRC28-202ENST00000331450 ANKRD36BQ8N2N9 1353 aa22.33■■□□□ 1.17
LRRC28-202ENST00000331450 WASHC2AQ641Q2 1341 aa22.32■■□□□ 1.16
LRRC28-202ENST00000331450 TNS3Q68CZ2 1445 aa22.32■■□□□ 1.16
LRRC28-202ENST00000331450 XPCQ01831 940 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms