RNA–Protein interactions for RNA: ENST00000330953.5

CCR4-201, Transcript of C-C motif chemokine receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR4, Length 3,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR4-201ENST00000330953 ABCC6O95255 1503 aa12.6□□□□□ -0.39
CCR4-201ENST00000330953 INSRP06213 1382 aa12.6□□□□□ -0.39
CCR4-201ENST00000330953 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
CCR4-201ENST00000330953 TESK2Q96S53 571 aa12.6□□□□□ -0.39
CCR4-201ENST00000330953 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
CCR4-201ENST00000330953 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
CCR4-201ENST00000330953 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
CCR4-201ENST00000330953 ESF1Q9H501 851 aaKnown RBP12.57□□□□□ -0.4
CCR4-201ENST00000330953 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
CCR4-201ENST00000330953 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
CCR4-201ENST00000330953 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
CCR4-201ENST00000330953 DCAF11Q8TEB1 546 aa12.55□□□□□ -0.4
CCR4-201ENST00000330953 ALS2Q96Q42 1657 aa12.55□□□□□ -0.4
CCR4-201ENST00000330953 CD163L1Q9NR16 1453 aa12.54□□□□□ -0.4
CCR4-201ENST00000330953 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
CCR4-201ENST00000330953 EIF4G2P78344 907 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCR4-201ENST00000330953 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
CCR4-201ENST00000330953 METP08581 1390 aa12.53□□□□□ -0.4
CCR4-201ENST00000330953 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
CCR4-201ENST00000330953 CENPBP07199 599 aaPredicted RBP12.53□□□□□ -0.4
CCR4-201ENST00000330953 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.41
CCR4-201ENST00000330953 CAMTA1Q9Y6Y1 1673 aa12.52□□□□□ -0.41
CCR4-201ENST00000330953 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
CCR4-201ENST00000330953 LTKP29376 864 aa12.51□□□□□ -0.41
CCR4-201ENST00000330953 SMG6Q86US8 1419 aaKnown RBP12.5□□□□□ -0.41
CCR4-201ENST00000330953 NSD2O96028 1365 aa12.5□□□□□ -0.41
CCR4-201ENST00000330953 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
CCR4-201ENST00000330953 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
CCR4-201ENST00000330953 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
CCR4-201ENST00000330953 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
CCR4-201ENST00000330953 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
CCR4-201ENST00000330953 ATAD2Q6PL18 1390 aa12.48□□□□□ -0.41
CCR4-201ENST00000330953 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
CCR4-201ENST00000330953 EID1Q9Y6B2 187 aa12.48□□□□□ -0.41
CCR4-201ENST00000330953 CDCA8Q53HL2 280 aa12.48□□□□□ -0.41
CCR4-201ENST00000330953 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
CCR4-201ENST00000330953 HSPA5P11021 654 aaKnown RBP12.47□□□□□ -0.41
CCR4-201ENST00000330953 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
CCR4-201ENST00000330953 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
CCR4-201ENST00000330953 PLEKHG2Q9H7P9 1386 aa12.46□□□□□ -0.41
CCR4-201ENST00000330953 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
CCR4-201ENST00000330953 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
CCR4-201ENST00000330953 SLIT3O75094 1523 aa12.45□□□□□ -0.42
CCR4-201ENST00000330953 KCNA6P17658 529 aa12.45□□□□□ -0.42
CCR4-201ENST00000330953 SHPRHQ149N8 1683 aa12.45□□□□□ -0.42
CCR4-201ENST00000330953 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
CCR4-201ENST00000330953 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
CCR4-201ENST00000330953 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
CCR4-201ENST00000330953 RGPD1P0DJD0 1748 aa12.44□□□□□ -0.42
CCR4-201ENST00000330953 DIEXFQ68CQ4 756 aaKnown RBP12.44□□□□□ -0.42
CCR4-201ENST00000330953 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
CCR4-201ENST00000330953 CARD11Q9BXL7 1154 aa12.43□□□□□ -0.42
CCR4-201ENST00000330953 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
CCR4-201ENST00000330953 KIF7Q2M1P5 1343 aa12.43□□□□□ -0.42
CCR4-201ENST00000330953 LMO7Q8WWI1 1683 aa12.43□□□□□ -0.42
CCR4-201ENST00000330953 CEBPAP49715 358 aaPredicted RBP12.42□□□□□ -0.42
CCR4-201ENST00000330953 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
CCR4-201ENST00000330953 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
CCR4-201ENST00000330953 USP31Q70CQ4 1352 aa12.41□□□□□ -0.42
CCR4-201ENST00000330953 TXNDC2Q86VQ3 553 aa12.41□□□□□ -0.42
CCR4-201ENST00000330953 ZBTB22O15209 634 aa12.4□□□□□ -0.42
CCR4-201ENST00000330953 MLECQ14165 292 aa12.4□□□□□ -0.42
CCR4-201ENST00000330953 TMF1P82094 1093 aa12.39□□□□□ -0.43
CCR4-201ENST00000330953 EDC4Q6P2E9 1401 aaKnown RBP12.39□□□□□ -0.43
CCR4-201ENST00000330953 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
CCR4-201ENST00000330953 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
CCR4-201ENST00000330953 ZNF326Q5BKZ1 582 aaKnown RBP12.38□□□□□ -0.43
CCR4-201ENST00000330953 EVC2Q86UK5 1308 aa12.38□□□□□ -0.43
CCR4-201ENST00000330953 COL18A1P39060 1754 aa12.37□□□□□ -0.43
CCR4-201ENST00000330953 KIF24Q5T7B8 1368 aa12.37□□□□□ -0.43
CCR4-201ENST00000330953 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
CCR4-201ENST00000330953 RGL3Q3MIN7 710 aa12.35□□□□□ -0.43
CCR4-201ENST00000330953 WNK3Q9BYP7 1800 aa12.35□□□□□ -0.43
CCR4-201ENST00000330953 PXDNQ92626 1479 aa12.35□□□□□ -0.43
CCR4-201ENST00000330953 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
CCR4-201ENST00000330953 C11orf95C9JLR9 678 aaPredicted RBP12.35□□□□□ -0.43
CCR4-201ENST00000330953 COL3A1P02461 1466 aaPredicted RBP12.35□□□□□ -0.43
CCR4-201ENST00000330953 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
CCR4-201ENST00000330953 OVOS2A0A0J9YW53 1432 aa12.34□□□□□ -0.43
CCR4-201ENST00000330953 NCAPD2Q15021 1401 aa12.34□□□□□ -0.43
CCR4-201ENST00000330953 OVOS2Q6IE36 1432 aa12.34□□□□□ -0.43
CCR4-201ENST00000330953 PLEKHH1Q9ULM0 1364 aa12.34□□□□□ -0.43
CCR4-201ENST00000330953 NFAT5O94916 1531 aa12.34□□□□□ -0.43
CCR4-201ENST00000330953 CCER2I3L3R5 266 aa12.33□□□□□ -0.44
CCR4-201ENST00000330953 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.44
CCR4-201ENST00000330953 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
CCR4-201ENST00000330953 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
CCR4-201ENST00000330953 WASLO00401 505 aaPredicted RBP12.32□□□□□ -0.44
CCR4-201ENST00000330953 USP6P35125 1406 aa12.32□□□□□ -0.44
CCR4-201ENST00000330953 C1orf167Q5SNV9 1468 aa12.32□□□□□ -0.44
CCR4-201ENST00000330953 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
CCR4-201ENST00000330953 COL16A1Q07092 1604 aaPredicted RBP12.31□□□□□ -0.44
CCR4-201ENST00000330953 LTN1O94822 1766 aa12.3□□□□□ -0.44
CCR4-201ENST00000330953 PNPLA6Q8IY17 1366 aa12.3□□□□□ -0.44
CCR4-201ENST00000330953 NWD2Q9ULI1 1742 aa12.29□□□□□ -0.44
CCR4-201ENST00000330953 AMOTL2Q9Y2J4 779 aa12.29□□□□□ -0.44
CCR4-201ENST00000330953 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
CCR4-201ENST00000330953 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
CCR4-201ENST00000330953 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
CCR4-201ENST00000330953 CDK12Q9NYV4 1490 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms