RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 GAS2L3Q86XJ1 694 aa30.63■■■□□ 2.49
SOX1-201ENST00000330949 GBP4Q96PP9 640 aa30.63■■■□□ 2.49
SOX1-201ENST00000330949 NCOA3Q9Y6Q9 1424 aa30.63■■■□□ 2.49
SOX1-201ENST00000330949 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.62■■■□□ 2.49
SOX1-201ENST00000330949 EFCAB2Q5VUJ9 269 aa30.61■■■□□ 2.49
SOX1-201ENST00000330949 SCAPERQ9BY12 1400 aa30.61■■■□□ 2.49
SOX1-201ENST00000330949 NPC1L1Q9UHC9 1359 aa30.61■■■□□ 2.49
SOX1-201ENST00000330949 PRDM4Q9UKN5 801 aa30.6■■■□□ 2.49
SOX1-201ENST00000330949 SYNMO15061 1565 aa30.6■■■□□ 2.49
SOX1-201ENST00000330949 UNC13BO14795 1591 aa30.59■■■□□ 2.49
SOX1-201ENST00000330949 DDIT3P35638 169 aa30.59■■■□□ 2.49
SOX1-201ENST00000330949 MFAP1P55081 439 aaKnown RBP30.59■■■□□ 2.49
SOX1-201ENST00000330949 PPP1R9BQ96SB3 815 aa30.59■■■□□ 2.49
SOX1-201ENST00000330949 CIZ1Q9ULV3 898 aaPredicted RBP30.59■■■□□ 2.49
SOX1-201ENST00000330949 ANP32BQ92688 251 aaKnown RBP30.58■■■□□ 2.49
SOX1-201ENST00000330949 MYO5CQ9NQX4 1742 aa30.58■■■□□ 2.49
SOX1-201ENST00000330949 DMRT2Q9Y5R5 561 aa30.58■■■□□ 2.49
SOX1-201ENST00000330949 CDCA8Q53HL2 280 aa30.57■■■□□ 2.48
SOX1-201ENST00000330949 SHROOM2Q13796 1616 aa30.56■■■□□ 2.48
SOX1-201ENST00000330949 MSNP26038 577 aaKnown RBP30.56■■■□□ 2.48
SOX1-201ENST00000330949 TNPO1Q92973 898 aaKnown RBP30.55■■■□□ 2.48
SOX1-201ENST00000330949 PLCH2O75038 1416 aa30.55■■■□□ 2.48
SOX1-201ENST00000330949 MAST1Q9Y2H9 1570 aa30.54■■■□□ 2.48
SOX1-201ENST00000330949 RNF17Q9BXT8 1623 aaKnown RBP30.54■■■□□ 2.48
SOX1-201ENST00000330949 IQGAP3Q86VI3 1631 aa30.51■■■□□ 2.48
SOX1-201ENST00000330949 NASPP49321 788 aaPredicted RBP30.51■■■□□ 2.48
SOX1-201ENST00000330949 RARSP54136 660 aaKnown RBP30.51■■■□□ 2.48
SOX1-201ENST00000330949 RIPK4P57078 832 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 SMC5Q8IY18 1101 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 SNX21Q969T3 373 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 DUOX2Q9NRD8 1548 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 WWC1Q8IX03 1113 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 SPAG9O60271 1321 aaKnown RBP30.51■■■□□ 2.47
SOX1-201ENST00000330949 RAB3GAP1Q15042 981 aa30.49■■■□□ 2.47
SOX1-201ENST00000330949 RLBP1P12271 317 aa30.48■■■□□ 2.47
SOX1-201ENST00000330949 RBM10P98175 930 aaKnown RBP30.47■■■□□ 2.47
SOX1-201ENST00000330949 IBTKQ9P2D0 1353 aaPredicted RBP30.46■■■□□ 2.47
SOX1-201ENST00000330949 ZCCHC11Q5TAX3 1644 aaKnown RBP30.45■■■□□ 2.47
SOX1-201ENST00000330949 MTERF4Q7Z6M4 381 aaKnown RBP30.45■■■□□ 2.47
SOX1-201ENST00000330949 HS1BP3Q53T59 392 aa30.44■■■□□ 2.46
SOX1-201ENST00000330949 FAM13BQ9NYF5 915 aa30.43■■■□□ 2.46
SOX1-201ENST00000330949 RBM25P49756 843 aaKnown RBP30.43■■■□□ 2.46
SOX1-201ENST00000330949 HSP90AB1P08238 724 aaKnown RBP30.42■■■□□ 2.46
SOX1-201ENST00000330949 KIF3BO15066 747 aa30.42■■■□□ 2.46
SOX1-201ENST00000330949 GOLGA6L22H0YM25 854 aa30.41■■■□□ 2.46
SOX1-201ENST00000330949 IQGAP1P46940 1657 aa30.4■■■□□ 2.46
SOX1-201ENST00000330949 SMAP1Q8IYB5 467 aaPredicted RBP30.4■■■□□ 2.46
SOX1-201ENST00000330949 SENP3Q9H4L4 574 aaPredicted RBP30.4■■■□□ 2.46
SOX1-201ENST00000330949 ABCC1P33527 1531 aa30.38■■■□□ 2.45
SOX1-201ENST00000330949 ATP10AO60312 1499 aa30.38■■■□□ 2.45
SOX1-201ENST00000330949 MVPQ14764 893 aaKnown RBP30.38■■■□□ 2.45
SOX1-201ENST00000330949 R3HCC1Q9Y3T6 440 aaKnown RBP30.38■■■□□ 2.45
SOX1-201ENST00000330949 MYOM1P52179 1685 aa30.38■■■□□ 2.45
SOX1-201ENST00000330949 CHGAP10645 457 aaKnown RBP30.37■■■□□ 2.45
SOX1-201ENST00000330949 CFAP70Q5T0N1 1121 aa30.37■■■□□ 2.45
SOX1-201ENST00000330949 TNNQ9UQP3 1299 aa30.37■■■□□ 2.45
SOX1-201ENST00000330949 ZNF500O60304 480 aaPredicted RBP30.35■■■□□ 2.45
SOX1-201ENST00000330949 KLHL40Q2TBA0 621 aa30.35■■■□□ 2.45
SOX1-201ENST00000330949 TNNT2P45379 298 aaPredicted RBP30.34■■■□□ 2.45
SOX1-201ENST00000330949 NOL7Q9UMY1 257 aaKnown RBP30.33■■■□□ 2.45
SOX1-201ENST00000330949 HDAC1Q13547 482 aaPredicted RBP30.32■■■□□ 2.44
SOX1-201ENST00000330949 UQCRHLA0A096LP55 91 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 UQCRHP07919 91 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 BCL2L13Q9BXK5 485 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 POLR3AO14802 1390 aaPredicted RBP30.31■■■□□ 2.44
SOX1-201ENST00000330949 WDR63Q8IWG1 891 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 DYNC1I1O14576 645 aa30.3■■■□□ 2.44
SOX1-201ENST00000330949 CLEC17AQ6ZS10 378 aa30.3■■■□□ 2.44
SOX1-201ENST00000330949 DDX49Q9Y6V7 483 aaKnown RBP30.3■■■□□ 2.44
SOX1-201ENST00000330949 SCAF11Q99590 1463 aaKnown RBP30.29■■■□□ 2.44
SOX1-201ENST00000330949 CSPP1Q1MSJ5 1256 aa30.29■■■□□ 2.44
SOX1-201ENST00000330949 FTSJ3Q8IY81 847 aaKnown RBP30.29■■■□□ 2.44
SOX1-201ENST00000330949 ZKSCAN2Q63HK3 967 aa30.27■■■□□ 2.44
SOX1-201ENST00000330949 KDM5AP29375 1690 aaKnown RBP30.27■■■□□ 2.44
SOX1-201ENST00000330949 ZNF445P59923 1031 aa30.27■■■□□ 2.44
SOX1-201ENST00000330949 NEUROD2Q15784 382 aa30.26■■■□□ 2.43
SOX1-201ENST00000330949 DZIP1LQ8IYY4 767 aaKnown RBP30.26■■■□□ 2.43
SOX1-201ENST00000330949 RUNDC1Q96C34 613 aa30.26■■■□□ 2.43
SOX1-201ENST00000330949 PHF23Q9BUL5 403 aaPredicted RBP30.26■■■□□ 2.43
SOX1-201ENST00000330949 ADGRF5Q8IZF2 1346 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 MADDQ8WXG6 1647 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 UGGT1Q9NYU2 1555 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 KANK1Q14678 1352 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 ZFYVE16Q7Z3T8 1539 aa30.24■■■□□ 2.43
SOX1-201ENST00000330949 K7ELQ4 463 aaPredicted RBP30.23■■■□□ 2.43
SOX1-201ENST00000330949 PDLIM2Q96JY6 352 aa30.23■■■□□ 2.43
SOX1-201ENST00000330949 CLTCL1P53675 1640 aa30.23■■■□□ 2.43
SOX1-201ENST00000330949 MCM5P33992 734 aa30.23■■■□□ 2.43
SOX1-201ENST00000330949 UHRF1BP1LA0JNW5 1464 aa30.22■■■□□ 2.43
SOX1-201ENST00000330949 ARHGAP31Q2M1Z3 1444 aa30.21■■■□□ 2.43
SOX1-201ENST00000330949 IQSEC2Q5JU85 1478 aa30.21■■■□□ 2.43
SOX1-201ENST00000330949 SSFA2P28290 1259 aa30.2■■■□□ 2.43
SOX1-201ENST00000330949 XPCQ01831 940 aaPredicted RBP30.2■■■□□ 2.43
SOX1-201ENST00000330949 TCP11L2Q8N4U5 519 aa30.2■■■□□ 2.43
SOX1-201ENST00000330949 RRP7AQ9Y3A4 280 aaKnown RBP30.19■■■□□ 2.42
SOX1-201ENST00000330949 FANCAO15360 1455 aa30.19■■■□□ 2.42
SOX1-201ENST00000330949 BAG4O95429 457 aaKnown RBP30.19■■■□□ 2.42
SOX1-201ENST00000330949 DDX19BQ9UMR2 479 aa30.19■■■□□ 2.42
SOX1-201ENST00000330949 ZKSCAN5Q9Y2L8 839 aa30.19■■■□□ 2.42
SOX1-201ENST00000330949 A0A0U1RQG5 324 aaPredicted RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms