RNA–Protein interactions for RNA: ENST00000328867.8

CAPN12-201, Transcript of calpain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN12, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-201ENST00000328867 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.99■■□□□ 1.59
CAPN12-201ENST00000328867 UHRF1BP1LA0JNW5 1464 aa24.99■■□□□ 1.59
CAPN12-201ENST00000328867 PLCH2O75038 1416 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 ZSCAN30Q86W11 494 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 SCAPERQ9BY12 1400 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 GAS2L3Q86XJ1 694 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 GBP4Q96PP9 640 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 PRDM4Q9UKN5 801 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 PCDHB15Q9Y5E8 787 aa24.98■■□□□ 1.59
CAPN12-201ENST00000328867 PPP1R9BQ96SB3 815 aa24.97■■□□□ 1.59
CAPN12-201ENST00000328867 CIZ1Q9ULV3 898 aaPredicted RBP24.97■■□□□ 1.59
CAPN12-201ENST00000328867 NPC1L1Q9UHC9 1359 aa24.97■■□□□ 1.59
CAPN12-201ENST00000328867 ATP10AO60312 1499 aa24.96■■□□□ 1.59
CAPN12-201ENST00000328867 DDIT3P35638 169 aa24.96■■□□□ 1.59
CAPN12-201ENST00000328867 CDCA8Q53HL2 280 aa24.93■■□□□ 1.58
CAPN12-201ENST00000328867 ANP32BQ92688 251 aaKnown RBP24.93■■□□□ 1.58
CAPN12-201ENST00000328867 ABCC1P33527 1531 aa24.93■■□□□ 1.58
CAPN12-201ENST00000328867 MFAP1P55081 439 aaKnown RBP24.93■■□□□ 1.58
CAPN12-201ENST00000328867 SYNMO15061 1565 aa24.93■■□□□ 1.58
CAPN12-201ENST00000328867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.587e-7■■□□□ 14.5
CAPN12-201ENST00000328867 DMRT2Q9Y5R5 561 aa24.92■■□□□ 1.58
CAPN12-201ENST00000328867 TNPO1Q92973 898 aaKnown RBP24.92■■□□□ 1.58
CAPN12-201ENST00000328867 MSNP26038 577 aaKnown RBP24.91■■□□□ 1.58
CAPN12-201ENST00000328867 RIPK4P57078 832 aa24.9■■□□□ 1.58
CAPN12-201ENST00000328867 EFCAB2Q5VUJ9 269 aa24.9■■□□□ 1.58
CAPN12-201ENST00000328867 SNX21Q969T3 373 aa24.9■■□□□ 1.58
CAPN12-201ENST00000328867 SMC5Q8IY18 1101 aa24.89■■□□□ 1.58
CAPN12-201ENST00000328867 RARSP54136 660 aaKnown RBP24.88■■□□□ 1.57
CAPN12-201ENST00000328867 NASPP49321 788 aaPredicted RBP24.88■■□□□ 1.57
CAPN12-201ENST00000328867 RNF17Q9BXT8 1623 aaKnown RBP24.87■■□□□ 1.57
CAPN12-201ENST00000328867 RAB3GAP1Q15042 981 aa24.87■■□□□ 1.57
CAPN12-201ENST00000328867 WWC1Q8IX03 1113 aa24.87■■□□□ 1.57
CAPN12-201ENST00000328867 ARAP3Q8WWN8 1544 aa24.85■■□□□ 1.57
CAPN12-201ENST00000328867 MTERF4Q7Z6M4 381 aaKnown RBP24.85■■□□□ 1.57
CAPN12-201ENST00000328867 RLBP1P12271 317 aa24.84■■□□□ 1.57
CAPN12-201ENST00000328867 RBM10P98175 930 aaKnown RBP24.84■■□□□ 1.57
CAPN12-201ENST00000328867 HS1BP3Q53T59 392 aa24.84■■□□□ 1.57
CAPN12-201ENST00000328867 IBTKQ9P2D0 1353 aaPredicted RBP24.84■■□□□ 1.57
CAPN12-201ENST00000328867 TRAPPC8Q9Y2L5 1435 aa24.84■■□□□ 1.57
CAPN12-201ENST00000328867 RBM25P49756 843 aaKnown RBP24.82■■□□□ 1.56
CAPN12-201ENST00000328867 SMAP1Q8IYB5 467 aaPredicted RBP24.82■■□□□ 1.56
CAPN12-201ENST00000328867 HSP90AB1P08238 724 aaKnown RBP24.81■■□□□ 1.56
CAPN12-201ENST00000328867 FAM13BQ9NYF5 915 aa24.81■■□□□ 1.56
CAPN12-201ENST00000328867 PLEKHG5O94827 1062 aa24.81■■□□□ 1.56
CAPN12-201ENST00000328867 GOLGA6L22H0YM25 854 aa24.79■■□□□ 1.56
CAPN12-201ENST00000328867 R3HCC1Q9Y3T6 440 aaKnown RBP24.78■■□□□ 1.56
CAPN12-201ENST00000328867 ZFYVE16Q7Z3T8 1539 aa24.78■■□□□ 1.56
CAPN12-201ENST00000328867 MVPQ14764 893 aaKnown RBP24.77■■□□□ 1.56
CAPN12-201ENST00000328867 ZNF500O60304 480 aaPredicted RBP24.76■■□□□ 1.56
CAPN12-201ENST00000328867 TNNQ9UQP3 1299 aa24.76■■□□□ 1.56
CAPN12-201ENST00000328867 IQGAP1P46940 1657 aa24.76■■□□□ 1.55
CAPN12-201ENST00000328867 KLHL40Q2TBA0 621 aa24.75■■□□□ 1.55
CAPN12-201ENST00000328867 NOL7Q9UMY1 257 aaKnown RBP24.74■■□□□ 1.55
CAPN12-201ENST00000328867 SPAG9O60271 1321 aaKnown RBP24.74■■□□□ 1.55
CAPN12-201ENST00000328867 DEPDC5O75140 1603 aa24.74■■□□□ 1.55
CAPN12-201ENST00000328867 HDAC1Q13547 482 aaPredicted RBP24.73■■□□□ 1.55
CAPN12-201ENST00000328867 CLEC17AQ6ZS10 378 aa24.73■■□□□ 1.55
CAPN12-201ENST00000328867 TRPM2O94759 1503 aa24.73■■□□□ 1.55
CAPN12-201ENST00000328867 DYNC1I1O14576 645 aa24.73■■□□□ 1.55
CAPN12-201ENST00000328867 WDR63Q8IWG1 891 aa24.73■■□□□ 1.55
CAPN12-201ENST00000328867 MYOM1P52179 1685 aa24.72■■□□□ 1.55
CAPN12-201ENST00000328867 UQCRHLA0A096LP55 91 aa24.72■■□□□ 1.55
CAPN12-201ENST00000328867 UQCRHP07919 91 aa24.72■■□□□ 1.55
CAPN12-201ENST00000328867 CSPP1Q1MSJ5 1256 aa24.72■■□□□ 1.55
CAPN12-201ENST00000328867 MADDQ8WXG6 1647 aa24.72■■□□□ 1.55
CAPN12-201ENST00000328867 POLR3AO14802 1390 aaPredicted RBP24.71■■□□□ 1.55
CAPN12-201ENST00000328867 CEP152O94986 1710 aa24.7■■□□□ 1.55
CAPN12-201ENST00000328867 DDX49Q9Y6V7 483 aaKnown RBP24.7■■□□□ 1.54
CAPN12-201ENST00000328867 SPHKAPQ2M3C7 1700 aa24.7■■□□□ 1.54
CAPN12-201ENST00000328867 ZNF445P59923 1031 aa24.7■■□□□ 1.54
CAPN12-201ENST00000328867 ABCA9Q8IUA7 1624 aa24.69■■□□□ 1.54
CAPN12-201ENST00000328867 SCAF11Q99590 1463 aaKnown RBP24.69■■□□□ 1.54
CAPN12-201ENST00000328867 ZKSCAN2Q63HK3 967 aa24.69■■□□□ 1.54
CAPN12-201ENST00000328867 BCL2L13Q9BXK5 485 aa24.69■■□□□ 1.54
CAPN12-201ENST00000328867 PTPRTO14522 1441 aa24.69■■□□□ 1.54
CAPN12-201ENST00000328867 INO80Q9ULG1 1556 aaPredicted RBP24.68■■□□□ 1.54
CAPN12-201ENST00000328867 KANK1Q14678 1352 aa24.68■■□□□ 1.54
CAPN12-201ENST00000328867 FTSJ3Q8IY81 847 aaKnown RBP24.68■■□□□ 1.54
CAPN12-201ENST00000328867 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
CAPN12-201ENST00000328867 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
CAPN12-201ENST00000328867 TET3O43151 1660 aa24.67■■□□□ 1.54
CAPN12-201ENST00000328867 MCM5P33992 734 aa24.67■■□□□ 1.54
CAPN12-201ENST00000328867 DZIP1LQ8IYY4 767 aaKnown RBP24.67■■□□□ 1.54
CAPN12-201ENST00000328867 AFAP1Q8N556 730 aa24.67■■□□□ 1.54
CAPN12-201ENST00000328867 ARHGAP31Q2M1Z3 1444 aa24.67■■□□□ 1.54
CAPN12-201ENST00000328867 PDLIM2Q96JY6 352 aa24.66■■□□□ 1.54
CAPN12-201ENST00000328867 ATP7AQ04656 1500 aa24.65■■□□□ 1.54
CAPN12-201ENST00000328867 K7ELQ4 463 aaPredicted RBP24.65■■□□□ 1.54
CAPN12-201ENST00000328867 VWDEQ8N2E2 1590 aa24.65■■□□□ 1.54
CAPN12-201ENST00000328867 CLTCL1P53675 1640 aa24.64■■□□□ 1.54
CAPN12-201ENST00000328867 NEUROD2Q15784 382 aa24.64■■□□□ 1.53
CAPN12-201ENST00000328867 KDM5AP29375 1690 aaKnown RBP24.64■■□□□ 1.53
CAPN12-201ENST00000328867 SSFA2P28290 1259 aa24.63■■□□□ 1.53
CAPN12-201ENST00000328867 UTP14CQ5TAP6 766 aaKnown RBP24.63■■□□□ 1.53
CAPN12-201ENST00000328867 STAC3Q96MF2 364 aa24.63■■□□□ 1.53
CAPN12-201ENST00000328867 BAG4O95429 457 aaKnown RBP24.63■■□□□ 1.53
CAPN12-201ENST00000328867 CCDC27Q2M243 656 aa24.63■■□□□ 1.53
CAPN12-201ENST00000328867 ZKSCAN5Q9Y2L8 839 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms