RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 CEP152O94986 1710 aa14.36□□□□□ -0.11
GINS3-202ENST00000328514 PANK1Q8TE04 598 aa14.35□□□□□ -0.11
GINS3-202ENST00000328514 RTEL1-TNFRSF6BF6WH68 1400 aa14.35□□□□□ -0.11
GINS3-202ENST00000328514 GLIPR1L2Q4G1C9 344 aa14.35□□□□□ -0.11
GINS3-202ENST00000328514 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
GINS3-202ENST00000328514 ARHGAP5Q13017 1502 aa14.34□□□□□ -0.11
GINS3-202ENST00000328514 MRE11P49959 708 aa14.34□□□□□ -0.11
GINS3-202ENST00000328514 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
GINS3-202ENST00000328514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
GINS3-202ENST00000328514 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.11
GINS3-202ENST00000328514 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.11
GINS3-202ENST00000328514 PCDHB15Q9Y5E8 787 aa14.33□□□□□ -0.11
GINS3-202ENST00000328514 IQSEC2Q5JU85 1478 aa14.33□□□□□ -0.12
GINS3-202ENST00000328514 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
GINS3-202ENST00000328514 CANXP27824 592 aaKnown RBP14.33□□□□□ -0.12
GINS3-202ENST00000328514 RWDD1Q9H446 243 aaPredicted RBP14.33□□□□□ -0.12
GINS3-202ENST00000328514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.33□□□□□ -0.12
GINS3-202ENST00000328514 WDR63Q8IWG1 891 aa14.32□□□□□ -0.12
GINS3-202ENST00000328514 PDZRN3Q9UPQ7 1066 aa14.32□□□□□ -0.12
GINS3-202ENST00000328514 ERVK-7P63135 1459 aa14.32□□□□□ -0.12
GINS3-202ENST00000328514 SHPRHQ149N8 1683 aa14.31□□□□□ -0.12
GINS3-202ENST00000328514 RRP9O43818 475 aaKnown RBP14.31□□□□□ -0.12
GINS3-202ENST00000328514 NCOA3Q9Y6Q9 1424 aa14.31□□□□□ -0.12
GINS3-202ENST00000328514 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
GINS3-202ENST00000328514 CCDC27Q2M243 656 aa14.31□□□□□ -0.12
GINS3-202ENST00000328514 TRAK2O60296 914 aa14.29□□□□□ -0.12
GINS3-202ENST00000328514 DDX11L8A8MPP1 907 aa14.29□□□□□ -0.12
GINS3-202ENST00000328514 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
GINS3-202ENST00000328514 MYO3AQ8NEV4 1616 aa14.29□□□□□ -0.12
GINS3-202ENST00000328514 CLTCL1P53675 1640 aa14.28□□□□□ -0.12
GINS3-202ENST00000328514 RLBP1P12271 317 aa14.28□□□□□ -0.12
GINS3-202ENST00000328514 DDIT3P35638 169 aa14.28□□□□□ -0.12
GINS3-202ENST00000328514 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
GINS3-202ENST00000328514 MYOM2P54296 1465 aa14.28□□□□□ -0.12
GINS3-202ENST00000328514 RUNDC1Q96C34 613 aa14.27□□□□□ -0.12
GINS3-202ENST00000328514 PANK2Q9BZ23 570 aa14.27□□□□□ -0.12
GINS3-202ENST00000328514 C22orf23Q9BZE7 217 aa14.27□□□□□ -0.12
GINS3-202ENST00000328514 DEPDC5O75140 1603 aa14.27□□□□□ -0.13
GINS3-202ENST00000328514 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
GINS3-202ENST00000328514 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
GINS3-202ENST00000328514 GRPEL1Q9HAV7 217 aa14.25□□□□□ -0.13
GINS3-202ENST00000328514 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
GINS3-202ENST00000328514 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
GINS3-202ENST00000328514 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
GINS3-202ENST00000328514 USP32Q8NFA0 1604 aa14.24□□□□□ -0.13
GINS3-202ENST00000328514 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
GINS3-202ENST00000328514 TET3O43151 1660 aa14.24□□□□□ -0.13
GINS3-202ENST00000328514 SNX21Q969T3 373 aa14.24□□□□□ -0.13
GINS3-202ENST00000328514 MYH16Q9H6N6 1097 aa14.24□□□□□ -0.13
GINS3-202ENST00000328514 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
GINS3-202ENST00000328514 ESPNB1AK53 854 aa14.23□□□□□ -0.13
GINS3-202ENST00000328514 HSP90AA2PQ14568 343 aaPredicted RBP14.23□□□□□ -0.13
GINS3-202ENST00000328514 VWDEQ8N2E2 1590 aa14.23□□□□□ -0.13
GINS3-202ENST00000328514 PLCH2O75038 1416 aa14.23□□□□□ -0.13
GINS3-202ENST00000328514 ABCC1P33527 1531 aa14.23□□□□□ -0.13
GINS3-202ENST00000328514 NRXN1Q9ULB1 1477 aa14.22□□□□□ -0.13
GINS3-202ENST00000328514 PTMSP20962 102 aa14.22□□□□□ -0.13
GINS3-202ENST00000328514 RBM25P49756 843 aaKnown RBP14.22□□□□□ -0.13
GINS3-202ENST00000328514 TCP11L2Q8N4U5 519 aa14.22□□□□□ -0.13
GINS3-202ENST00000328514 ABCA6Q8N139 1617 aa14.22□□□□□ -0.13
GINS3-202ENST00000328514 ZNF518AQ6AHZ1 1483 aa14.22□□□□□ -0.13
GINS3-202ENST00000328514 SMC5Q8IY18 1101 aa14.21□□□□□ -0.13
GINS3-202ENST00000328514 PKNOX2Q96KN3 472 aa14.21□□□□□ -0.13
GINS3-202ENST00000328514 ADGRB2O60241 1585 aa14.21□□□□□ -0.13
GINS3-202ENST00000328514 HSCBQ8IWL3 235 aa14.21□□□□□ -0.14
GINS3-202ENST00000328514 GZF1Q9H116 711 aaPredicted RBP14.21□□□□□ -0.14
GINS3-202ENST00000328514 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
GINS3-202ENST00000328514 ZKSCAN2Q63HK3 967 aa14.2□□□□□ -0.14
GINS3-202ENST00000328514 TNNQ9UQP3 1299 aa14.2□□□□□ -0.14
GINS3-202ENST00000328514 PPRC1Q5VV67 1664 aaKnown RBP14.2□□□□□ -0.14
GINS3-202ENST00000328514 DZIP1LQ8IYY4 767 aaKnown RBP14.19□□□□□ -0.14
GINS3-202ENST00000328514 IFT172Q9UG01 1749 aa14.19□□□□□ -0.14
GINS3-202ENST00000328514 SETBP1Q9Y6X0 1596 aa14.19□□□□□ -0.14
GINS3-202ENST00000328514 TPM2P07951 284 aa14.18□□□□□ -0.14
GINS3-202ENST00000328514 SPATA31D1Q6ZQQ2 1576 aa14.18□□□□□ -0.14
GINS3-202ENST00000328514 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
GINS3-202ENST00000328514 ZFYVE16Q7Z3T8 1539 aa14.17□□□□□ -0.14
GINS3-202ENST00000328514 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
GINS3-202ENST00000328514 MFAP1P55081 439 aaKnown RBP14.17□□□□□ -0.14
GINS3-202ENST00000328514 RAB3GAP1Q15042 981 aa14.17□□□□□ -0.14
GINS3-202ENST00000328514 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
GINS3-202ENST00000328514 DDX19BQ9UMR2 479 aa14.17□□□□□ -0.14
GINS3-202ENST00000328514 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
GINS3-202ENST00000328514 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
GINS3-202ENST00000328514 IBTKQ9P2D0 1353 aaPredicted RBP14.16□□□□□ -0.14
GINS3-202ENST00000328514 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
GINS3-202ENST00000328514 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
GINS3-202ENST00000328514 GBP4Q96PP9 640 aa14.16□□□□□ -0.14
GINS3-202ENST00000328514 ARHGAP31Q2M1Z3 1444 aa14.16□□□□□ -0.14
GINS3-202ENST00000328514 INO80Q9ULG1 1556 aaPredicted RBP14.16□□□□□ -0.14
GINS3-202ENST00000328514 CLEC17AQ6ZS10 378 aa14.15□□□□□ -0.14
GINS3-202ENST00000328514 CFAP70Q5T0N1 1121 aa14.15□□□□□ -0.14
GINS3-202ENST00000328514 FTSJ3Q8IY81 847 aaKnown RBP14.15□□□□□ -0.14
GINS3-202ENST00000328514 TNPO1Q92973 898 aaKnown RBP14.15□□□□□ -0.14
GINS3-202ENST00000328514 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
GINS3-202ENST00000328514 RRP7AQ9Y3A4 280 aaKnown RBP14.15□□□□□ -0.14
GINS3-202ENST00000328514 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
GINS3-202ENST00000328514 NSD2O96028 1365 aa14.14□□□□□ -0.15
GINS3-202ENST00000328514 ARXQ96QS3 562 aa14.14□□□□□ -0.15
GINS3-202ENST00000328514 PPP1R9BQ96SB3 815 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms