RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 NINLQ9Y2I6 1382 aa19.24■□□□□ 0.67
CHEK2-201ENST00000328354 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
CHEK2-201ENST00000328354 ARHGAP23Q9P227 1491 aa19.23■□□□□ 0.67
CHEK2-201ENST00000328354 TECPR2O15040 1411 aa19.22■□□□□ 0.67
CHEK2-201ENST00000328354 SLC12A5Q9H2X9 1139 aa19.22■□□□□ 0.67
CHEK2-201ENST00000328354 POGKQ9P215 609 aa19.22■□□□□ 0.67
CHEK2-201ENST00000328354 METP08581 1390 aa19.21■□□□□ 0.67
CHEK2-201ENST00000328354 PLEKHG1Q9ULL1 1385 aa19.21■□□□□ 0.67
CHEK2-201ENST00000328354 PPP2R1AP30153 589 aa19.21■□□□□ 0.67
CHEK2-201ENST00000328354 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
CHEK2-201ENST00000328354 ADAMTS13Q76LX8 1427 aa19.2■□□□□ 0.66
CHEK2-201ENST00000328354 ATAD2Q6PL18 1390 aa19.2■□□□□ 0.66
CHEK2-201ENST00000328354 CPS1P31327 1500 aa19.2■□□□□ 0.66
CHEK2-201ENST00000328354 SAFB2Q14151 953 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHEK2-201ENST00000328354 NSD3Q9BZ95 1437 aa19.2■□□□□ 0.66
CHEK2-201ENST00000328354 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
CHEK2-201ENST00000328354 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
CHEK2-201ENST00000328354 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
CHEK2-201ENST00000328354 MED14O60244 1454 aa19.18■□□□□ 0.66
CHEK2-201ENST00000328354 MINK1Q8N4C8 1332 aaPredicted RBP19.17■□□□□ 0.66
CHEK2-201ENST00000328354 LTKP29376 864 aa19.16■□□□□ 0.66
CHEK2-201ENST00000328354 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
CHEK2-201ENST00000328354 PLEKHH1Q9ULM0 1364 aa19.15■□□□□ 0.66
CHEK2-201ENST00000328354 SRPK2P78362 688 aaKnown RBP19.14■□□□□ 0.65
CHEK2-201ENST00000328354 NSD2O96028 1365 aa19.14■□□□□ 0.65
CHEK2-201ENST00000328354 CEP170BQ9Y4F5 1589 aaPredicted RBP19.13■□□□□ 0.65
CHEK2-201ENST00000328354 WAPLQ7Z5K2 1190 aa19.13■□□□□ 0.65
CHEK2-201ENST00000328354 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
CHEK2-201ENST00000328354 THEMISQ8N1K5 641 aaPredicted RBP19.13■□□□□ 0.65
CHEK2-201ENST00000328354 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
CHEK2-201ENST00000328354 CDK19Q9BWU1 502 aa19.12■□□□□ 0.65
CHEK2-201ENST00000328354 CD163L1Q9NR16 1453 aa19.12■□□□□ 0.65
CHEK2-201ENST00000328354 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
CHEK2-201ENST00000328354 CGNL1Q0VF96 1302 aa19.12■□□□□ 0.65
CHEK2-201ENST00000328354 DIP2AQ14689 1571 aa19.12■□□□□ 0.65
CHEK2-201ENST00000328354 SETD1BQ9UPS6 1966 aaKnown RBP19.12■□□□□ 0.65
CHEK2-201ENST00000328354 A0A1W2PP64 1363 aa19.11■□□□□ 0.65
CHEK2-201ENST00000328354 SUPT16HQ9Y5B9 1047 aaKnown RBP19.1■□□□□ 0.65
CHEK2-201ENST00000328354 LMTK3Q96Q04 1460 aa19.1■□□□□ 0.65
CHEK2-201ENST00000328354 ANKRD26Q9UPS8 1709 aa19.09■□□□□ 0.65
CHEK2-201ENST00000328354 SMG6Q86US8 1419 aaKnown RBP19.09■□□□□ 0.65
CHEK2-201ENST00000328354 BCANQ96GW7 911 aa19.09■□□□□ 0.65
CHEK2-201ENST00000328354 ADGRB2O60241 1585 aa19.09■□□□□ 0.65
CHEK2-201ENST00000328354 ATP7BP35670 1465 aa19.07■□□□□ 0.64
CHEK2-201ENST00000328354 TERF2IPQ9NYB0 399 aa19.07■□□□□ 0.64
CHEK2-201ENST00000328354 POLR3AO14802 1390 aaPredicted RBP19.07■□□□□ 0.64
CHEK2-201ENST00000328354 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
CHEK2-201ENST00000328354 ROBO2Q9HCK4 1378 aa19.06■□□□□ 0.64
CHEK2-201ENST00000328354 WASLO00401 505 aaPredicted RBP19.06■□□□□ 0.64
CHEK2-201ENST00000328354 HSPA2P54652 639 aa19.06■□□□□ 0.64
CHEK2-201ENST00000328354 MORC1Q86VD1 984 aa19.06■□□□□ 0.64
CHEK2-201ENST00000328354 PTPRUQ92729 1446 aa19.06■□□□□ 0.64
CHEK2-201ENST00000328354 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
CHEK2-201ENST00000328354 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
CHEK2-201ENST00000328354 ADAMTS8Q9UP79 889 aa19.04■□□□□ 0.64
CHEK2-201ENST00000328354 NEFLP07196 543 aa19.03■□□□□ 0.64
CHEK2-201ENST00000328354 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHEK2-201ENST00000328354 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
CHEK2-201ENST00000328354 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
CHEK2-201ENST00000328354 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
CHEK2-201ENST00000328354 CABP1Q9NZU7 370 aa19.02■□□□□ 0.64
CHEK2-201ENST00000328354 XRN1Q8IZH2 1706 aaKnown RBP19.02■□□□□ 0.64
CHEK2-201ENST00000328354 SHPRHQ149N8 1683 aa19.02■□□□□ 0.63
CHEK2-201ENST00000328354 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
CHEK2-201ENST00000328354 FKBP8Q14318 412 aa19.01■□□□□ 0.63
CHEK2-201ENST00000328354 SLC26A8Q96RN1 970 aa19.01■□□□□ 0.63
CHEK2-201ENST00000328354 CPSF1Q10570 1443 aaKnown RBP19■□□□□ 0.63
CHEK2-201ENST00000328354 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
CHEK2-201ENST00000328354 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
CHEK2-201ENST00000328354 AKAP12Q02952 1782 aa18.99■□□□□ 0.63
CHEK2-201ENST00000328354 MON2Q7Z3U7 1717 aa18.99■□□□□ 0.63
CHEK2-201ENST00000328354 TOPAZ1Q8N9V7 1692 aa18.99■□□□□ 0.63
CHEK2-201ENST00000328354 PPIP5K1Q6PFW1 1433 aa18.98■□□□□ 0.63
CHEK2-201ENST00000328354 FYB1O15117 783 aa18.97■□□□□ 0.63
CHEK2-201ENST00000328354 ITSN1Q15811 1721 aa18.97■□□□□ 0.63
CHEK2-201ENST00000328354 NUDT16Q96DE0 195 aaKnown RBP18.97■□□□□ 0.63
CHEK2-201ENST00000328354 AMOTL2Q9Y2J4 779 aa18.97■□□□□ 0.63
CHEK2-201ENST00000328354 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
CHEK2-201ENST00000328354 EDC4Q6P2E9 1401 aaKnown RBP18.95■□□□□ 0.62
CHEK2-201ENST00000328354 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
CHEK2-201ENST00000328354 MTHFSP49914 203 aa18.94■□□□□ 0.62
CHEK2-201ENST00000328354 CHD2O14647 1828 aaKnown RBP18.94■□□□□ 0.62
CHEK2-201ENST00000328354 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
CHEK2-201ENST00000328354 ANKLE2Q86XL3 938 aa18.93■□□□□ 0.62
CHEK2-201ENST00000328354 GGNBP2Q9H3C7 697 aa18.93■□□□□ 0.62
CHEK2-201ENST00000328354 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
CHEK2-201ENST00000328354 RNF123Q5XPI4 1314 aa18.92■□□□□ 0.62
CHEK2-201ENST00000328354 CFAP53Q96M91 514 aa18.92■□□□□ 0.62
CHEK2-201ENST00000328354 ERICH6BQ5W0A0 696 aa18.91■□□□□ 0.62
CHEK2-201ENST00000328354 ZNF521Q96K83 1311 aa18.9■□□□□ 0.62
CHEK2-201ENST00000328354 NGEFQ8N5V2 710 aa18.9■□□□□ 0.62
CHEK2-201ENST00000328354 STRCQ7RTU9 1775 aa18.89■□□□□ 0.62
CHEK2-201ENST00000328354 NRKQ7Z2Y5 1582 aa18.89■□□□□ 0.61
CHEK2-201ENST00000328354 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
CHEK2-201ENST00000328354 ZNF692Q9BU19 519 aaPredicted RBP18.89■□□□□ 0.61
CHEK2-201ENST00000328354 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
CHEK2-201ENST00000328354 PLEKHG3A1L390 1219 aa18.88■□□□□ 0.61
CHEK2-201ENST00000328354 NCKAP5LQ9HCH0 1330 aa18.87■□□□□ 0.61
CHEK2-201ENST00000328354 MAP2P11137 1827 aaKnown RBP18.87■□□□□ 0.61
CHEK2-201ENST00000328354 PNPLA6Q8IY17 1366 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms