RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 INSRP06213 1382 aa20.08■□□□□ 0.81
TPM3-205ENST00000328159 ABCC11Q96J66 1382 aa20.08■□□□□ 0.81
TPM3-205ENST00000328159 NINLQ9Y2I6 1382 aa20.06■□□□□ 0.8
TPM3-205ENST00000328159 METP08581 1390 aa20.06■□□□□ 0.8
TPM3-205ENST00000328159 ANKRD36BQ8N2N9 1353 aa20.06■□□□□ 0.8
TPM3-205ENST00000328159 NEFLP07196 543 aa20.06■□□□□ 0.8
TPM3-205ENST00000328159 SRPK2P78362 688 aaKnown RBP20.06■□□□□ 0.8
TPM3-205ENST00000328159 KNDC1Q76NI1 1749 aa20.05■□□□□ 0.8
TPM3-205ENST00000328159 ATAD2Q6PL18 1390 aa20.04■□□□□ 0.8
TPM3-205ENST00000328159 FKBP8Q14318 412 aa20.04■□□□□ 0.8
TPM3-205ENST00000328159 BLMP54132 1417 aaPredicted RBP20.03■□□□□ 0.8
TPM3-205ENST00000328159 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
TPM3-205ENST00000328159 BCANQ96GW7 911 aa20.02■□□□□ 0.8
TPM3-205ENST00000328159 PLEKHG1Q9ULL1 1385 aa20.02■□□□□ 0.79
TPM3-205ENST00000328159 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.79
TPM3-205ENST00000328159 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
TPM3-205ENST00000328159 WAPLQ7Z5K2 1190 aa20.01■□□□□ 0.79
TPM3-205ENST00000328159 SLIT1O75093 1534 aa20.01■□□□□ 0.79
TPM3-205ENST00000328159 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
TPM3-205ENST00000328159 CDK19Q9BWU1 502 aa20■□□□□ 0.79
TPM3-205ENST00000328159 CGNL1Q0VF96 1302 aa20■□□□□ 0.79
TPM3-205ENST00000328159 TECPR2O15040 1411 aa20■□□□□ 0.79
TPM3-205ENST00000328159 ADAMTS13Q76LX8 1427 aa20■□□□□ 0.79
TPM3-205ENST00000328159 ARHGAP23Q9P227 1491 aa20■□□□□ 0.79
TPM3-205ENST00000328159 CPS1P31327 1500 aa19.99■□□□□ 0.79
TPM3-205ENST00000328159 SENP3-EIF4A1A0A087X0R7 540 aa19.99■□□□□ 0.79
TPM3-205ENST00000328159 LTKP29376 864 aa19.99■□□□□ 0.79
TPM3-205ENST00000328159 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
TPM3-205ENST00000328159 RIMS1Q86UR5 1692 aaKnown RBP19.99■□□□□ 0.79
TPM3-205ENST00000328159 TXNDC2Q86VQ3 553 aa19.98■□□□□ 0.79
TPM3-205ENST00000328159 FAM135BQ49AJ0 1406 aa19.98■□□□□ 0.79
TPM3-205ENST00000328159 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.79
TPM3-205ENST00000328159 MORC1Q86VD1 984 aa19.98■□□□□ 0.79
TPM3-205ENST00000328159 A0A1W2PP64 1363 aa19.98■□□□□ 0.79
TPM3-205ENST00000328159 NSD2O96028 1365 aa19.98■□□□□ 0.79
TPM3-205ENST00000328159 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
TPM3-205ENST00000328159 EID1Q9Y6B2 187 aa19.97■□□□□ 0.79
TPM3-205ENST00000328159 ADAMTS8Q9UP79 889 aa19.96■□□□□ 0.79
TPM3-205ENST00000328159 TERF2IPQ9NYB0 399 aa19.95■□□□□ 0.78
TPM3-205ENST00000328159 MED14O60244 1454 aa19.95■□□□□ 0.78
TPM3-205ENST00000328159 CD163L1Q9NR16 1453 aa19.95■□□□□ 0.78
TPM3-205ENST00000328159 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
TPM3-205ENST00000328159 ADAMTSL3P82987 1691 aa19.93■□□□□ 0.78
TPM3-205ENST00000328159 POLR3AO14802 1390 aaPredicted RBP19.92■□□□□ 0.78
TPM3-205ENST00000328159 CEP170BQ9Y4F5 1589 aaPredicted RBP19.92■□□□□ 0.78
TPM3-205ENST00000328159 WASLO00401 505 aaPredicted RBP19.91■□□□□ 0.78
TPM3-205ENST00000328159 HDGFL2Q7Z4V5 671 aaPredicted RBP19.91■□□□□ 0.78
TPM3-205ENST00000328159 ANKRD26Q9UPS8 1709 aa19.91■□□□□ 0.78
TPM3-205ENST00000328159 CABP1Q9NZU7 370 aa19.9■□□□□ 0.78
TPM3-205ENST00000328159 SALL2Q9Y467 1007 aaPredicted RBP19.9■□□□□ 0.78
TPM3-205ENST00000328159 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
TPM3-205ENST00000328159 ROBO2Q9HCK4 1378 aa19.9■□□□□ 0.78
TPM3-205ENST00000328159 ATP7BP35670 1465 aa19.89■□□□□ 0.78
TPM3-205ENST00000328159 TNNT2P45379 298 aaPredicted RBP19.89■□□□□ 0.77
TPM3-205ENST00000328159 DIP2AQ14689 1571 aa19.88■□□□□ 0.77
TPM3-205ENST00000328159 SLC26A8Q96RN1 970 aa19.88■□□□□ 0.77
TPM3-205ENST00000328159 KIF20BQ96Q89 1820 aa19.87■□□□□ 0.77
TPM3-205ENST00000328159 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
TPM3-205ENST00000328159 TBX22Q9Y458 520 aa19.87■□□□□ 0.77
TPM3-205ENST00000328159 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
TPM3-205ENST00000328159 ADGRB2O60241 1585 aa19.86■□□□□ 0.77
TPM3-205ENST00000328159 ZNF142P52746 1687 aaPredicted RBP19.85■□□□□ 0.77
TPM3-205ENST00000328159 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
TPM3-205ENST00000328159 PPIP5K1Q6PFW1 1433 aa19.84■□□□□ 0.77
TPM3-205ENST00000328159 FYB1O15117 783 aa19.84■□□□□ 0.77
TPM3-205ENST00000328159 IRX6P78412 446 aaPredicted RBP19.84■□□□□ 0.77
TPM3-205ENST00000328159 GGNBP2Q9H3C7 697 aa19.84■□□□□ 0.77
TPM3-205ENST00000328159 MTHFSP49914 203 aa19.83■□□□□ 0.77
TPM3-205ENST00000328159 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
TPM3-205ENST00000328159 CFAP53Q96M91 514 aa19.83■□□□□ 0.76
TPM3-205ENST00000328159 ERICH6BQ5W0A0 696 aa19.82■□□□□ 0.76
TPM3-205ENST00000328159 CDC42BPGQ6DT37 1551 aa19.82■□□□□ 0.76
TPM3-205ENST00000328159 CPSF1Q10570 1443 aaKnown RBP19.81■□□□□ 0.76
TPM3-205ENST00000328159 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
TPM3-205ENST00000328159 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
TPM3-205ENST00000328159 CCDC146Q8IYE0 955 aa19.8■□□□□ 0.76
TPM3-205ENST00000328159 RNF123Q5XPI4 1314 aa19.8■□□□□ 0.76
TPM3-205ENST00000328159 PTCH1Q13635 1447 aa19.8■□□□□ 0.76
TPM3-205ENST00000328159 CDCA7LQ96GN5 454 aa19.8■□□□□ 0.76
TPM3-205ENST00000328159 CCDC61Q9Y6R9 512 aa19.8■□□□□ 0.76
TPM3-205ENST00000328159 ITSN1Q15811 1721 aa19.79■□□□□ 0.76
TPM3-205ENST00000328159 MON2Q7Z3U7 1717 aa19.79■□□□□ 0.76
TPM3-205ENST00000328159 AKAP12Q02952 1782 aa19.79■□□□□ 0.76
TPM3-205ENST00000328159 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
TPM3-205ENST00000328159 EDC4Q6P2E9 1401 aaKnown RBP19.78■□□□□ 0.76
TPM3-205ENST00000328159 PRR36Q9H6K5 1346 aa19.78■□□□□ 0.76
TPM3-205ENST00000328159 TOPAZ1Q8N9V7 1692 aa19.77■□□□□ 0.76
TPM3-205ENST00000328159 ZNF521Q96K83 1311 aa19.76■□□□□ 0.75
TPM3-205ENST00000328159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.76■□□□□ 0.75
TPM3-205ENST00000328159 PELP1Q8IZL8 1130 aaKnown RBP19.76■□□□□ 0.75
TPM3-205ENST00000328159 PIK3R4Q99570 1358 aa19.76■□□□□ 0.75
TPM3-205ENST00000328159 NCKAP5LQ9HCH0 1330 aa19.75■□□□□ 0.75
TPM3-205ENST00000328159 APAF1O14727 1248 aa19.75■□□□□ 0.75
TPM3-205ENST00000328159 ANKLE2Q86XL3 938 aa19.75■□□□□ 0.75
TPM3-205ENST00000328159 NGEFQ8N5V2 710 aa19.74■□□□□ 0.75
TPM3-205ENST00000328159 COL3A1P02461 1466 aaPredicted RBP19.73■□□□□ 0.75
TPM3-205ENST00000328159 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
TPM3-205ENST00000328159 ZNF692Q9BU19 519 aaPredicted RBP19.72■□□□□ 0.75
TPM3-205ENST00000328159 GOLGA2Q08379 1002 aa19.71■□□□□ 0.75
TPM3-205ENST00000328159 RUNDC1Q96C34 613 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms