RNA–Protein interactions for RNA: ENST00000327892.12

TUBB-205, Transcript of tubulin beta class I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB, Length 2,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-205ENST00000327892 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
TUBB-205ENST00000327892 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
TUBB-205ENST00000327892 SCAF11Q99590 1463 aaKnown RBP12.84□□□□□ -0.35
TUBB-205ENST00000327892 ESPNB1AK53 854 aa12.84□□□□□ -0.35
TUBB-205ENST00000327892 MTHFSP49914 203 aa12.84□□□□□ -0.35
TUBB-205ENST00000327892 MVPQ14764 893 aaKnown RBP12.84□□□□□ -0.35
TUBB-205ENST00000327892 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
TUBB-205ENST00000327892 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
TUBB-205ENST00000327892 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
TUBB-205ENST00000327892 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
TUBB-205ENST00000327892 ZCCHC11Q5TAX3 1644 aaKnown RBP12.82□□□□□ -0.36
TUBB-205ENST00000327892 EIF2AK4Q9P2K8 1649 aaKnown RBP12.82□□□□□ -0.36
TUBB-205ENST00000327892 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
TUBB-205ENST00000327892 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
TUBB-205ENST00000327892 ADGRF5Q8IZF2 1346 aa12.81□□□□□ -0.36
TUBB-205ENST00000327892 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
TUBB-205ENST00000327892 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
TUBB-205ENST00000327892 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
TUBB-205ENST00000327892 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
TUBB-205ENST00000327892 AFAP1Q8N556 730 aa12.81□□□□□ -0.36
TUBB-205ENST00000327892 ZKSCAN2Q63HK3 967 aa12.8□□□□□ -0.36
TUBB-205ENST00000327892 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
TUBB-205ENST00000327892 WDR63Q8IWG1 891 aa12.8□□□□□ -0.36
TUBB-205ENST00000327892 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
TUBB-205ENST00000327892 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
TUBB-205ENST00000327892 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
TUBB-205ENST00000327892 ATP10AO60312 1499 aa12.8□□□□□ -0.36
TUBB-205ENST00000327892 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
TUBB-205ENST00000327892 TRIM27P14373 513 aa12.79□□□□□ -0.36
TUBB-205ENST00000327892 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
TUBB-205ENST00000327892 SYNMO15061 1565 aa12.79□□□□□ -0.36
TUBB-205ENST00000327892 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
TUBB-205ENST00000327892 TRIM44Q96DX7 344 aaPredicted RBP12.79□□□□□ -0.36
TUBB-205ENST00000327892 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
TUBB-205ENST00000327892 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
TUBB-205ENST00000327892 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
TUBB-205ENST00000327892 AAMPQ13685 434 aa12.78□□□□□ -0.36
TUBB-205ENST00000327892 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
TUBB-205ENST00000327892 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
TUBB-205ENST00000327892 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
TUBB-205ENST00000327892 CD2BP2O95400 341 aaKnown RBP12.78□□□□□ -0.36
TUBB-205ENST00000327892 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
TUBB-205ENST00000327892 LNPKQ9C0E8 428 aa12.78□□□□□ -0.36
TUBB-205ENST00000327892 UNC13BO14795 1591 aa12.77□□□□□ -0.36
TUBB-205ENST00000327892 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
TUBB-205ENST00000327892 DDIT3P35638 169 aa12.77□□□□□ -0.37
TUBB-205ENST00000327892 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
TUBB-205ENST00000327892 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
TUBB-205ENST00000327892 TSPOAP1O95153 1857 aa12.76□□□□□ -0.37
TUBB-205ENST00000327892 IQGAP3Q86VI3 1631 aa12.76□□□□□ -0.37
TUBB-205ENST00000327892 RNF17Q9BXT8 1623 aaKnown RBP12.76□□□□□ -0.37
TUBB-205ENST00000327892 ERVK-7P63135 1459 aa12.76□□□□□ -0.37
TUBB-205ENST00000327892 MADDQ8WXG6 1647 aa12.76□□□□□ -0.37
TUBB-205ENST00000327892 MYOM1P52179 1685 aa12.75□□□□□ -0.37
TUBB-205ENST00000327892 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
TUBB-205ENST00000327892 TMEM132EQ6IEE7 984 aa12.75□□□□□ -0.37
TUBB-205ENST00000327892 TMEM57Q8N5G2 664 aa12.75□□□□□ -0.37
TUBB-205ENST00000327892 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
TUBB-205ENST00000327892 SCAPERQ9BY12 1400 aa12.75□□□□□ -0.37
TUBB-205ENST00000327892 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
TUBB-205ENST00000327892 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
TUBB-205ENST00000327892 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
TUBB-205ENST00000327892 HDAC1Q13547 482 aaPredicted RBP12.74□□□□□ -0.37
TUBB-205ENST00000327892 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
TUBB-205ENST00000327892 KIF2CQ99661 725 aa12.74□□□□□ -0.37
TUBB-205ENST00000327892 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
TUBB-205ENST00000327892 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
TUBB-205ENST00000327892 RBM25P49756 843 aaKnown RBP12.73□□□□□ -0.37
TUBB-205ENST00000327892 ZMYM3Q14202 1370 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 PREX2Q70Z35 1606 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 TRAPPC8Q9Y2L5 1435 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 KIF3BO15066 747 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
TUBB-205ENST00000327892 TTC37Q6PGP7 1564 aa12.71□□□□□ -0.37
TUBB-205ENST00000327892 SSFA2P28290 1259 aa12.71□□□□□ -0.37
TUBB-205ENST00000327892 SPAG9O60271 1321 aaKnown RBP12.71□□□□□ -0.37
TUBB-205ENST00000327892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.71□□□□□ -0.383e-12■□□□□ 8.9
TUBB-205ENST00000327892 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.38
TUBB-205ENST00000327892 SNX21Q969T3 373 aa12.71□□□□□ -0.38
TUBB-205ENST00000327892 CFAP53Q96M91 514 aa12.71□□□□□ -0.38
TUBB-205ENST00000327892 GBP4Q96PP9 640 aa12.71□□□□□ -0.38
TUBB-205ENST00000327892 ANKRD45Q5TZF3 282 aa12.7□□□□□ -0.38
TUBB-205ENST00000327892 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
TUBB-205ENST00000327892 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
TUBB-205ENST00000327892 MAST1Q9Y2H9 1570 aa12.7□□□□□ -0.38
TUBB-205ENST00000327892 RBM10P98175 930 aaKnown RBP12.7□□□□□ -0.38
TUBB-205ENST00000327892 NUCB1Q02818 461 aa12.7□□□□□ -0.38
TUBB-205ENST00000327892 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
TUBB-205ENST00000327892 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
TUBB-205ENST00000327892 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
TUBB-205ENST00000327892 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
TUBB-205ENST00000327892 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
TUBB-205ENST00000327892 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
TUBB-205ENST00000327892 SAFB2Q14151 953 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms