RNA–Protein interactions for RNA: ENST00000326524.6

GDNF-201, Transcript of glial cell derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDNF, Length 3,810 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-201ENST00000326524 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
GDNF-201ENST00000326524 FTSJ3Q8IY81 847 aaKnown RBP14.11□□□□□ -0.15
GDNF-201ENST00000326524 MORC1Q86VD1 984 aa14.11□□□□□ -0.15
GDNF-201ENST00000326524 MYH16Q9H6N6 1097 aa14.11□□□□□ -0.15
GDNF-201ENST00000326524 DDX11L8A8MPP1 907 aa14.11□□□□□ -0.15
GDNF-201ENST00000326524 CEP152O94986 1710 aa14.1□□□□□ -0.15
GDNF-201ENST00000326524 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
GDNF-201ENST00000326524 WDR63Q8IWG1 891 aa14.09□□□□□ -0.15
GDNF-201ENST00000326524 MVPQ14764 893 aaKnown RBP14.09□□□□□ -0.15
GDNF-201ENST00000326524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.09□□□□□ -0.15
GDNF-201ENST00000326524 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
GDNF-201ENST00000326524 TRPM2O94759 1503 aa14.08□□□□□ -0.15
GDNF-201ENST00000326524 ERVK-7P63135 1459 aa14.08□□□□□ -0.16
GDNF-201ENST00000326524 CFAP70Q5T0N1 1121 aa14.08□□□□□ -0.16
GDNF-201ENST00000326524 ZKSCAN2Q63HK3 967 aa14.08□□□□□ -0.16
GDNF-201ENST00000326524 TRIM44Q96DX7 344 aaPredicted RBP14.08□□□□□ -0.16
GDNF-201ENST00000326524 DZIP1LQ8IYY4 767 aaKnown RBP14.07□□□□□ -0.16
GDNF-201ENST00000326524 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
GDNF-201ENST00000326524 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
GDNF-201ENST00000326524 ESPNB1AK53 854 aa14.05□□□□□ -0.16
GDNF-201ENST00000326524 CLTCL1P53675 1640 aa14.05□□□□□ -0.16
GDNF-201ENST00000326524 RRP9O43818 475 aaKnown RBP14.05□□□□□ -0.16
GDNF-201ENST00000326524 NSD3Q9BZ95 1437 aa14.05□□□□□ -0.16
GDNF-201ENST00000326524 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
GDNF-201ENST00000326524 VSIG10Q8N0Z9 540 aa14.04□□□□□ -0.16
GDNF-201ENST00000326524 PKNOX2Q96KN3 472 aa14.04□□□□□ -0.16
GDNF-201ENST00000326524 RTEL1-TNFRSF6BF6WH68 1400 aa14.04□□□□□ -0.16
GDNF-201ENST00000326524 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
GDNF-201ENST00000326524 ITPRIPQ8IWB1 547 aa14.03□□□□□ -0.16
GDNF-201ENST00000326524 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
GDNF-201ENST00000326524 IQSEC2Q5JU85 1478 aa14.03□□□□□ -0.16
GDNF-201ENST00000326524 CCDC27Q2M243 656 aa14.03□□□□□ -0.16
GDNF-201ENST00000326524 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
GDNF-201ENST00000326524 KIAA1210Q9ULL0 1709 aa14.03□□□□□ -0.16
GDNF-201ENST00000326524 PTPRTO14522 1441 aa14.02□□□□□ -0.16
GDNF-201ENST00000326524 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.16
GDNF-201ENST00000326524 HSP90AB1P08238 724 aaKnown RBP14.02□□□□□ -0.16
GDNF-201ENST00000326524 SHPRHQ149N8 1683 aa14.02□□□□□ -0.16
GDNF-201ENST00000326524 MTHFSP49914 203 aa14.02□□□□□ -0.17
GDNF-201ENST00000326524 DDX19BQ9UMR2 479 aa14.01□□□□□ -0.17
GDNF-201ENST00000326524 KANK1Q14678 1352 aa14.01□□□□□ -0.17
GDNF-201ENST00000326524 ADGRF5Q8IZF2 1346 aa14.01□□□□□ -0.17
GDNF-201ENST00000326524 U2AF1L5P0DN76 240 aaPredicted RBP14.01□□□□□ -0.17
GDNF-201ENST00000326524 U2AF1Q01081 240 aaKnown RBP eCLIP14.01□□□□□ -0.17
GDNF-201ENST00000326524 HDAC1Q13547 482 aaPredicted RBP14.01□□□□□ -0.17
GDNF-201ENST00000326524 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
GDNF-201ENST00000326524 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
GDNF-201ENST00000326524 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
GDNF-201ENST00000326524 TSR2Q969E8 191 aaKnown RBP13.99□□□□□ -0.17
GDNF-201ENST00000326524 SLC12A5Q9H2X9 1139 aa13.99□□□□□ -0.17
GDNF-201ENST00000326524 SKOR2Q2VWA4 1001 aaPredicted RBP13.99□□□□□ -0.17
GDNF-201ENST00000326524 ERBB4Q15303 1308 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
GDNF-201ENST00000326524 TRIM27P14373 513 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 CIZ1Q9ULV3 898 aaPredicted RBP13.98□□□□□ -0.17
GDNF-201ENST00000326524 SHROOM2Q13796 1616 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 ABCA6Q8N139 1617 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 MAP3K4Q9Y6R4 1608 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 PLCH2O75038 1416 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 PTMSP20962 102 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 SNX21Q969T3 373 aa13.98□□□□□ -0.17
GDNF-201ENST00000326524 EXOSC9Q06265 439 aaKnown RBP13.97□□□□□ -0.17
GDNF-201ENST00000326524 SMC5Q8IY18 1101 aa13.97□□□□□ -0.17
GDNF-201ENST00000326524 SBNO2Q9Y2G9 1366 aa13.97□□□□□ -0.17
GDNF-201ENST00000326524 NCOA3Q9Y6Q9 1424 aa13.97□□□□□ -0.17
GDNF-201ENST00000326524 RBM25P49756 843 aaKnown RBP13.97□□□□□ -0.17
GDNF-201ENST00000326524 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
GDNF-201ENST00000326524 TRAK1Q9UPV9 953 aa13.97□□□□□ -0.17
GDNF-201ENST00000326524 ZNF518AQ6AHZ1 1483 aa13.97□□□□□ -0.17
GDNF-201ENST00000326524 AFAP1Q8N556 730 aa13.96□□□□□ -0.17
GDNF-201ENST00000326524 ZMYND15Q9H091 742 aa13.96□□□□□ -0.17
GDNF-201ENST00000326524 MYOM2P54296 1465 aa13.96□□□□□ -0.17
GDNF-201ENST00000326524 TET3O43151 1660 aa13.96□□□□□ -0.17
GDNF-201ENST00000326524 ABCC1P33527 1531 aa13.96□□□□□ -0.17
GDNF-201ENST00000326524 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.18
GDNF-201ENST00000326524 ANP32BQ92688 251 aaKnown RBP13.96□□□□□ -0.18
GDNF-201ENST00000326524 LNPKQ9C0E8 428 aa13.96□□□□□ -0.18
GDNF-201ENST00000326524 DDIT3P35638 169 aa13.95□□□□□ -0.18
GDNF-201ENST00000326524 SSH1Q8WYL5 1049 aa13.95□□□□□ -0.18
GDNF-201ENST00000326524 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
GDNF-201ENST00000326524 GOLGA6L22H0YM25 854 aa13.95□□□□□ -0.18
GDNF-201ENST00000326524 KIF3BO15066 747 aa13.95□□□□□ -0.18
GDNF-201ENST00000326524 TPM2P07951 284 aa13.94□□□□□ -0.18
GDNF-201ENST00000326524 RAB3GAP1Q15042 981 aa13.94□□□□□ -0.18
GDNF-201ENST00000326524 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
GDNF-201ENST00000326524 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
GDNF-201ENST00000326524 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
GDNF-201ENST00000326524 NOB1Q9ULX3 412 aaKnown RBP13.94□□□□□ -0.18
GDNF-201ENST00000326524 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
GDNF-201ENST00000326524 UGGT1Q9NYU2 1555 aa13.93□□□□□ -0.18
GDNF-201ENST00000326524 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
GDNF-201ENST00000326524 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
GDNF-201ENST00000326524 NUCB1Q02818 461 aa13.92□□□□□ -0.18
GDNF-201ENST00000326524 MYO3AQ8NEV4 1616 aa13.92□□□□□ -0.18
GDNF-201ENST00000326524 CHD1LQ86WJ1 897 aa13.91□□□□□ -0.18
GDNF-201ENST00000326524 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
GDNF-201ENST00000326524 NASPP49321 788 aaPredicted RBP13.91□□□□□ -0.18
GDNF-201ENST00000326524 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
GDNF-201ENST00000326524 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
GDNF-201ENST00000326524 KIF1BO60333 1816 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms