RNA–Protein interactions for RNA: ENST00000318837.6

IGSF3-201, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene IGSF3, Length 3,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-201ENST00000318837 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
IGSF3-201ENST00000318837 CFAP65Q6ZU64 1925 aaKnown RBP12.56□□□□□ -0.4
IGSF3-201ENST00000318837 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
IGSF3-201ENST00000318837 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
IGSF3-201ENST00000318837 EIF2AK4Q9P2K8 1649 aaKnown RBP12.55□□□□□ -0.4
IGSF3-201ENST00000318837 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
IGSF3-201ENST00000318837 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
IGSF3-201ENST00000318837 MYH16Q9H6N6 1097 aa12.55□□□□□ -0.4
IGSF3-201ENST00000318837 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
IGSF3-201ENST00000318837 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
IGSF3-201ENST00000318837 SEC24BO95487 1268 aa12.54□□□□□ -0.4
IGSF3-201ENST00000318837 RIPK4P57078 832 aa12.53□□□□□ -0.4
IGSF3-201ENST00000318837 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
IGSF3-201ENST00000318837 APBB1O00213 710 aa12.52□□□□□ -0.4
IGSF3-201ENST00000318837 C14orf93Q9H972 538 aaKnown RBP12.52□□□□□ -0.4
IGSF3-201ENST00000318837 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
IGSF3-201ENST00000318837 DIAPH1O60610 1272 aaKnown RBP12.52□□□□□ -0.41
IGSF3-201ENST00000318837 TRMT2AQ8IZ69 625 aaKnown RBP12.52□□□□□ -0.41
IGSF3-201ENST00000318837 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
IGSF3-201ENST00000318837 HDGFP51858 240 aaKnown RBP12.51□□□□□ -0.41
IGSF3-201ENST00000318837 LAMC1P11047 1609 aa12.51□□□□□ -0.41
IGSF3-201ENST00000318837 PDE3AQ14432 1141 aa12.51□□□□□ -0.41
IGSF3-201ENST00000318837 WWC1Q8IX03 1113 aa12.51□□□□□ -0.41
IGSF3-201ENST00000318837 PIK3C2GO75747 1445 aa12.51□□□□□ -0.41
IGSF3-201ENST00000318837 CDC42BPBQ9Y5S2 1711 aa12.5□□□□□ -0.41
IGSF3-201ENST00000318837 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
IGSF3-201ENST00000318837 SLC26A8Q96RN1 970 aa12.5□□□□□ -0.41
IGSF3-201ENST00000318837 MYO5CQ9NQX4 1742 aa12.5□□□□□ -0.41
IGSF3-201ENST00000318837 UGGT1Q9NYU2 1555 aa12.49□□□□□ -0.41
IGSF3-201ENST00000318837 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
IGSF3-201ENST00000318837 UNC13BO14795 1591 aa12.49□□□□□ -0.41
IGSF3-201ENST00000318837 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
IGSF3-201ENST00000318837 USP19O94966 1318 aa12.48□□□□□ -0.41
IGSF3-201ENST00000318837 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
IGSF3-201ENST00000318837 NGDNQ8NEJ9 315 aaKnown RBP12.48□□□□□ -0.41
IGSF3-201ENST00000318837 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
IGSF3-201ENST00000318837 EXOSC9Q06265 439 aaKnown RBP12.48□□□□□ -0.41
IGSF3-201ENST00000318837 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
IGSF3-201ENST00000318837 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
IGSF3-201ENST00000318837 COG3Q96JB2 828 aa12.47□□□□□ -0.41
IGSF3-201ENST00000318837 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
IGSF3-201ENST00000318837 TNNQ9UQP3 1299 aa12.47□□□□□ -0.41
IGSF3-201ENST00000318837 IQGAP3Q86VI3 1631 aa12.46□□□□□ -0.41
IGSF3-201ENST00000318837 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
IGSF3-201ENST00000318837 RRS1Q15050 365 aaKnown RBP12.46□□□□□ -0.41
IGSF3-201ENST00000318837 RPGRIP1LQ68CZ1 1315 aa12.46□□□□□ -0.42
IGSF3-201ENST00000318837 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.42
IGSF3-201ENST00000318837 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.42
IGSF3-201ENST00000318837 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 ATP7AQ04656 1500 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 ZNF518AQ6AHZ1 1483 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 ATP10AO60312 1499 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 GZF1Q9H116 711 aaPredicted RBP12.45□□□□□ -0.42
IGSF3-201ENST00000318837 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
IGSF3-201ENST00000318837 MAST1Q9Y2H9 1570 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
IGSF3-201ENST00000318837 SYNMO15061 1565 aa12.44□□□□□ -0.42
IGSF3-201ENST00000318837 RARSP54136 660 aaKnown RBP12.44□□□□□ -0.42
IGSF3-201ENST00000318837 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
IGSF3-201ENST00000318837 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
IGSF3-201ENST00000318837 ZCCHC11Q5TAX3 1644 aaKnown RBP12.43□□□□□ -0.42
IGSF3-201ENST00000318837 RLBP1P12271 317 aa12.43□□□□□ -0.42
IGSF3-201ENST00000318837 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
IGSF3-201ENST00000318837 CLASP1Q7Z460 1538 aa12.43□□□□□ -0.42
IGSF3-201ENST00000318837 MFAP1P55081 439 aaKnown RBP12.43□□□□□ -0.42
IGSF3-201ENST00000318837 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
IGSF3-201ENST00000318837 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
IGSF3-201ENST00000318837 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
IGSF3-201ENST00000318837 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
IGSF3-201ENST00000318837 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
IGSF3-201ENST00000318837 NME9Q86XW9 330 aa12.42□□□□□ -0.42
IGSF3-201ENST00000318837 RNF17Q9BXT8 1623 aaKnown RBP12.42□□□□□ -0.42
IGSF3-201ENST00000318837 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
IGSF3-201ENST00000318837 MADDQ8WXG6 1647 aa12.42□□□□□ -0.42
IGSF3-201ENST00000318837 AMPHP49418 695 aa12.41□□□□□ -0.42
IGSF3-201ENST00000318837 NECTIN2Q92692 538 aa12.41□□□□□ -0.42
IGSF3-201ENST00000318837 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
IGSF3-201ENST00000318837 RSPH6AQ9H0K4 717 aa12.41□□□□□ -0.42
IGSF3-201ENST00000318837 ABCC1P33527 1531 aa12.41□□□□□ -0.42
IGSF3-201ENST00000318837 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
IGSF3-201ENST00000318837 TBC1D32Q96NH3 1257 aa12.41□□□□□ -0.42
IGSF3-201ENST00000318837 PLXNC1O60486 1568 aa12.4□□□□□ -0.42
IGSF3-201ENST00000318837 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
IGSF3-201ENST00000318837 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
IGSF3-201ENST00000318837 NPATQ14207 1427 aa12.4□□□□□ -0.43
IGSF3-201ENST00000318837 FYB1O15117 783 aa12.39□□□□□ -0.43
IGSF3-201ENST00000318837 DCTN1Q14203 1278 aa12.39□□□□□ -0.43
IGSF3-201ENST00000318837 C1orf115Q9H7X2 142 aa12.39□□□□□ -0.43
IGSF3-201ENST00000318837 IQGAP1P46940 1657 aa12.39□□□□□ -0.43
IGSF3-201ENST00000318837 GOLGA6L3A6NEY3 463 aa12.39□□□□□ -0.43
IGSF3-201ENST00000318837 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
IGSF3-201ENST00000318837 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
IGSF3-201ENST00000318837 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
IGSF3-201ENST00000318837 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
IGSF3-201ENST00000318837 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
IGSF3-201ENST00000318837 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
IGSF3-201ENST00000318837 UHRF1BP1LA0JNW5 1464 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms