RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PLEKHD1A6NEE1 506 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 POLR3GO15318 223 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-201ENST00000317147 HOOK1Q9UJC3 728 aaKnown RBP5.47□□□□□ -1.53
CNOT1-201ENST00000317147 DCTN1Q14203 1278 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 TRAK2O60296 914 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 CAGE1Q8TC20 777 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 DEF6Q9H4E7 631 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 EIF3JO75822 258 aaKnown RBP5.46□□□□□ -1.53
CNOT1-201ENST00000317147 FHOD3Q2V2M9 1422 aa5.46□□□□□ -1.53
CNOT1-201ENST00000317147 GOLGA6L19H0YKK7 550 aa5.46□□□□□ -1.53
CNOT1-201ENST00000317147 TXLNBQ8N3L3 684 aa5.46□□□□□ -1.53
CNOT1-201ENST00000317147 TEX14Q8IWB6 1497 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 MYH7BA7E2Y1 1941 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 ZKSCAN2Q63HK3 967 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 FEZ1Q99689 392 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 MCM3P25205 808 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 CCDC88CQ9P219 2028 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 FRAT2O75474 233 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-201ENST00000317147 NPM1P06748 294 aaKnown RBP eCLIP5.46□□□□□ -1.54
CNOT1-201ENST00000317147 RP1L1Q8IWN7 2480 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-201ENST00000317147 NKTRP30414 1462 aaKnown RBP5.46□□□□□ -1.54
CNOT1-201ENST00000317147 CLUAP1Q96AJ1 413 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 CGNQ9P2M7 1197 aaKnown RBP5.46□□□□□ -1.54
CNOT1-201ENST00000317147 LEKR1Q6ZMV7 388 aa5.46□□□□□ -1.54
CNOT1-201ENST00000317147 TUBBP07437 444 aa5.45□□□□□ -1.54
CNOT1-201ENST00000317147 V9GYY5 206 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-201ENST00000317147 MNS1Q8NEH6 495 aa5.45□□□□□ -1.54
CNOT1-201ENST00000317147 C22orf23Q9BZE7 217 aa5.45□□□□□ -1.54
CNOT1-201ENST00000317147 IQCEQ6IPM2 695 aa5.45□□□□□ -1.54
CNOT1-201ENST00000317147 IBTKQ9P2D0 1353 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-201ENST00000317147 ERLIN1O75477 346 aa5.45□□□□□ -1.54
CNOT1-201ENST00000317147 TAF7LQ5H9L4 462 aa5.45□□□□□ -1.54
CNOT1-201ENST00000317147 LRRFIP1Q32MZ4 808 aaKnown RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 CRBNQ96SW2 442 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 BCL11BQ9C0K0 894 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 A6NNZ2 444 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 U2SURPO15042 1029 aaKnown RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 TUBB8Q3ZCM7 444 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 INTS3Q68E01 1043 aaKnown RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 MYH14Q7Z406 1995 aaKnown RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 NEFHP12036 1026 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 NBPF1Q3BBV0 1214 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 DDX11Q96FC9 970 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 PCF11O94913 1555 aaKnown RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 POTEB2H3BUK9 544 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 RDXP35241 583 aaKnown RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 RPRD2Q5VT52 1461 aaKnown RBP5.44□□□□□ -1.54
CNOT1-201ENST00000317147 DCAF8L1A6NGE4 600 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 RALGAPBQ86X10 1494 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 ERCC6Q03468 1493 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 UVSSAQ2YD98 709 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 TPRNQ4KMQ1 711 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 PAXBP1Q9Y5B6 917 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 REREQ9P2R6 1566 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 IGF1RP08069 1367 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 ST20-MTHFSA0A0A6YYL1 179 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 GBP3Q9H0R5 595 aa5.44□□□□□ -1.54
CNOT1-201ENST00000317147 IVLP07476 585 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 MCM4P33991 863 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 NUP160Q12769 1436 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 MYO5CQ9NQX4 1742 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 SPAG9O60271 1321 aaKnown RBP5.43□□□□□ -1.54
CNOT1-201ENST00000317147 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 SKAP1Q86WV1 359 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-201ENST00000317147 GPRASP1Q5JY77 1395 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 PDS5BQ9NTI5 1447 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 GABPB1Q06547 395 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-201ENST00000317147 NCBP3Q53F19 620 aaKnown RBP5.43□□□□□ -1.54
CNOT1-201ENST00000317147 RUFY2Q8WXA3 655 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 CCDC94Q9BW85 323 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-201ENST00000317147 ABCA10Q8WWZ4 1543 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 GCC1Q96CN9 775 aa5.43□□□□□ -1.54
CNOT1-201ENST00000317147 TSPY26PQ9H489 355 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 KIAA1107Q9UPP5 1409 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 GOLGA6L7A0A1B0GV03 622 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 GOLGA6L9A6NEM1 432 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 TIGD1Q96MW7 591 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 CHD4Q14839 1912 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 PIP4K2AP48426 406 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-201ENST00000317147 ANKRD20A12PQ8NF67 263 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 ZMYND15Q9H091 742 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 NUP155O75694 1391 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 CDC45O75419 566 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 UTP14CQ5TAP6 766 aaKnown RBP5.42□□□□□ -1.54
CNOT1-201ENST00000317147 JAKMIP3Q5VZ66 844 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 PLPPR3Q6T4P5 718 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 MYO6Q9UM54 1294 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 SNAPC4Q5SXM2 1469 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 IPO7O95373 1038 aaKnown RBP5.42□□□□□ -1.54
CNOT1-201ENST00000317147 CCDC192P0DO97 292 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 INCENPQ9NQS7 918 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 CCDC112Q8NEF3 446 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 CDCA7LQ96GN5 454 aa5.42□□□□□ -1.54
CNOT1-201ENST00000317147 UQCRHLA0A096LP55 91 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 UQCRHP07919 91 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 LRRIQ1Q96JM4 1722 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 DNMBPQ6XZF7 1577 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 BECN2A8MW95 431 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 TSR1Q2NL82 804 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms