RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 GOLGA6L3A6NEY3 463 aa20.79■□□□□ 0.92
CACFD1-202ENST00000316948 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
CACFD1-202ENST00000316948 KIAA1210Q9ULL0 1709 aa20.79■□□□□ 0.92
CACFD1-202ENST00000316948 MAP3K4Q9Y6R4 1608 aa20.79■□□□□ 0.92
CACFD1-202ENST00000316948 PANK2Q9BZ23 570 aa20.78■□□□□ 0.92
CACFD1-202ENST00000316948 PMFBP1Q8TBY8 1022 aa20.77■□□□□ 0.92
CACFD1-202ENST00000316948 RLBP1P12271 317 aa20.77■□□□□ 0.92
CACFD1-202ENST00000316948 FANCAO15360 1455 aa20.77■□□□□ 0.92
CACFD1-202ENST00000316948 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.91
CACFD1-202ENST00000316948 CHGAP10645 457 aaKnown RBP20.76■□□□□ 0.91
CACFD1-202ENST00000316948 NAP1L5Q96NT1 182 aaPredicted RBP20.76■□□□□ 0.91
CACFD1-202ENST00000316948 MCM4P33991 863 aa20.74■□□□□ 0.91
CACFD1-202ENST00000316948 RARSP54136 660 aaKnown RBP20.74■□□□□ 0.91
CACFD1-202ENST00000316948 TRAK1Q9UPV9 953 aa20.74■□□□□ 0.91
CACFD1-202ENST00000316948 INO80Q9ULG1 1556 aaPredicted RBP20.74■□□□□ 0.91
CACFD1-202ENST00000316948 MYOM2P54296 1465 aa20.74■□□□□ 0.91
CACFD1-202ENST00000316948 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
CACFD1-202ENST00000316948 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
CACFD1-202ENST00000316948 VIRMAQ69YN4 1812 aaKnown RBP20.73■□□□□ 0.91
CACFD1-202ENST00000316948 ARAP3Q8WWN8 1544 aa20.73■□□□□ 0.91
CACFD1-202ENST00000316948 MORC1Q86VD1 984 aa20.73■□□□□ 0.91
CACFD1-202ENST00000316948 KIF1BO60333 1816 aa20.72■□□□□ 0.91
CACFD1-202ENST00000316948 NINLQ9Y2I6 1382 aa20.72■□□□□ 0.91
CACFD1-202ENST00000316948 NSD3Q9BZ95 1437 aa20.72■□□□□ 0.91
CACFD1-202ENST00000316948 POLR3AO14802 1390 aaPredicted RBP20.72■□□□□ 0.91
CACFD1-202ENST00000316948 MROH1Q8NDA8 1641 aa20.72■□□□□ 0.91
CACFD1-202ENST00000316948 PNNQ9H307 717 aaKnown RBP20.72■□□□□ 0.91
CACFD1-202ENST00000316948 ADGRL1O94910 1474 aa20.71■□□□□ 0.91
CACFD1-202ENST00000316948 MROH2AA6NES4 1674 aa20.71■□□□□ 0.91
CACFD1-202ENST00000316948 MFAP1P55081 439 aaKnown RBP20.7■□□□□ 0.9
CACFD1-202ENST00000316948 NOS1P29475 1434 aa20.7■□□□□ 0.9
CACFD1-202ENST00000316948 RWDD1Q9H446 243 aaPredicted RBP20.7■□□□□ 0.9
CACFD1-202ENST00000316948 NGEFQ8N5V2 710 aa20.69■□□□□ 0.9
CACFD1-202ENST00000316948 CFAP65Q6ZU64 1925 aaKnown RBP20.69■□□□□ 0.9
CACFD1-202ENST00000316948 FSD2A1L4K1 749 aa20.69■□□□□ 0.9
CACFD1-202ENST00000316948 TRAK2O60296 914 aa20.68■□□□□ 0.9
CACFD1-202ENST00000316948 TMEM132EQ6IEE7 984 aa20.68■□□□□ 0.9
CACFD1-202ENST00000316948 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
CACFD1-202ENST00000316948 NEURL4Q96JN8 1562 aa20.68■□□□□ 0.9
CACFD1-202ENST00000316948 ABCA9Q8IUA7 1624 aa20.67■□□□□ 0.9
CACFD1-202ENST00000316948 IFT172Q9UG01 1749 aa20.67■□□□□ 0.9
CACFD1-202ENST00000316948 EFCAB6Q5THR3 1501 aa20.67■□□□□ 0.9
CACFD1-202ENST00000316948 C22orf23Q9BZE7 217 aa20.67■□□□□ 0.9
CACFD1-202ENST00000316948 RUNDC1Q96C34 613 aa20.66■□□□□ 0.9
CACFD1-202ENST00000316948 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
CACFD1-202ENST00000316948 CHMP5Q9NZZ3 219 aa20.66■□□□□ 0.9
CACFD1-202ENST00000316948 SBNO2Q9Y2G9 1366 aa20.65■□□□□ 0.9
CACFD1-202ENST00000316948 PPRC1Q5VV67 1664 aaKnown RBP20.65■□□□□ 0.9
CACFD1-202ENST00000316948 SHPRHQ149N8 1683 aa20.65■□□□□ 0.9
CACFD1-202ENST00000316948 MTHFSP49914 203 aa20.64■□□□□ 0.9
CACFD1-202ENST00000316948 NRXN1Q9ULB1 1477 aa20.64■□□□□ 0.89
CACFD1-202ENST00000316948 MYO3AQ8NEV4 1616 aa20.64■□□□□ 0.89
CACFD1-202ENST00000316948 CLCN1P35523 988 aa20.63■□□□□ 0.89
CACFD1-202ENST00000316948 AAMPQ13685 434 aa20.62■□□□□ 0.89
CACFD1-202ENST00000316948 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
CACFD1-202ENST00000316948 FTSJ3Q8IY81 847 aaKnown RBP20.61■□□□□ 0.89
CACFD1-202ENST00000316948 MRE11P49959 708 aa20.6■□□□□ 0.89
CACFD1-202ENST00000316948 GGT6Q6P531 493 aa20.6■□□□□ 0.89
CACFD1-202ENST00000316948 C14orf93Q9H972 538 aaKnown RBP20.6■□□□□ 0.89
CACFD1-202ENST00000316948 KIDINS220Q9ULH0 1771 aa20.59■□□□□ 0.89
CACFD1-202ENST00000316948 MVPQ14764 893 aaKnown RBP20.59■□□□□ 0.89
CACFD1-202ENST00000316948 HSP90AA1P07900 732 aaKnown RBP20.59■□□□□ 0.89
CACFD1-202ENST00000316948 PHF23Q9BUL5 403 aaPredicted RBP20.59■□□□□ 0.89
CACFD1-202ENST00000316948 ADGRB3O60242 1522 aa20.59■□□□□ 0.89
CACFD1-202ENST00000316948 HSCBQ8IWL3 235 aa20.58■□□□□ 0.89
CACFD1-202ENST00000316948 MYH16Q9H6N6 1097 aa20.58■□□□□ 0.89
CACFD1-202ENST00000316948 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.89
CACFD1-202ENST00000316948 IQSEC2Q5JU85 1478 aa20.58■□□□□ 0.89
CACFD1-202ENST00000316948 GRPEL1Q9HAV7 217 aa20.58■□□□□ 0.88
CACFD1-202ENST00000316948 GLIPR1L2Q4G1C9 344 aa20.57■□□□□ 0.88
CACFD1-202ENST00000316948 WDR63Q8IWG1 891 aa20.57■□□□□ 0.88
CACFD1-202ENST00000316948 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
CACFD1-202ENST00000316948 HSP90AA2PQ14568 343 aaPredicted RBP20.56■□□□□ 0.88
CACFD1-202ENST00000316948 ZMYM3Q14202 1370 aa20.56■□□□□ 0.88
CACFD1-202ENST00000316948 U2AF1L5P0DN76 240 aaPredicted RBP20.56■□□□□ 0.88
CACFD1-202ENST00000316948 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.88
CACFD1-202ENST00000316948 ZKSCAN2Q63HK3 967 aa20.56■□□□□ 0.88
CACFD1-202ENST00000316948 DZIP1LQ8IYY4 767 aaKnown RBP20.56■□□□□ 0.88
CACFD1-202ENST00000316948 CFAP53Q96M91 514 aa20.56■□□□□ 0.88
CACFD1-202ENST00000316948 NPATQ14207 1427 aa20.55■□□□□ 0.88
CACFD1-202ENST00000316948 ZNF518AQ6AHZ1 1483 aa20.55■□□□□ 0.88
CACFD1-202ENST00000316948 ZC3H13Q5T200 1668 aaKnown RBP20.54■□□□□ 0.88
CACFD1-202ENST00000316948 ADGRB1O14514 1584 aa20.54■□□□□ 0.88
CACFD1-202ENST00000316948 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
CACFD1-202ENST00000316948 ASXL2Q76L83 1435 aa20.54■□□□□ 0.88
CACFD1-202ENST00000316948 DDX11L8A8MPP1 907 aa20.54■□□□□ 0.88
CACFD1-202ENST00000316948 SAFB2Q14151 953 aaKnown RBP eCLIP20.54■□□□□ 0.88
CACFD1-202ENST00000316948 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
CACFD1-202ENST00000316948 ITPRIPQ8IWB1 547 aa20.53■□□□□ 0.88
CACFD1-202ENST00000316948 PPLO60437 1756 aa20.52■□□□□ 0.88
CACFD1-202ENST00000316948 ESPNB1AK53 854 aa20.52■□□□□ 0.88
CACFD1-202ENST00000316948 LMTK2Q8IWU2 1503 aa20.52■□□□□ 0.88
CACFD1-202ENST00000316948 CABP2Q9NPB3 220 aa20.51■□□□□ 0.87
CACFD1-202ENST00000316948 SMC4Q9NTJ3 1288 aa20.51■□□□□ 0.87
CACFD1-202ENST00000316948 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
CACFD1-202ENST00000316948 CCDC27Q2M243 656 aa20.51■□□□□ 0.87
CACFD1-202ENST00000316948 TRIM44Q96DX7 344 aaPredicted RBP20.51■□□□□ 0.87
CACFD1-202ENST00000316948 ZNF692Q9BU19 519 aaPredicted RBP20.51■□□□□ 0.87
CACFD1-202ENST00000316948 PKNOX2Q96KN3 472 aa20.5■□□□□ 0.87
CACFD1-202ENST00000316948 FOXD4L1Q9NU39 408 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms