RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
SEC16A-203ENST00000313050 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
SEC16A-203ENST00000313050 KIF3BO15066 747 aa12.57□□□□□ -0.4
SEC16A-203ENST00000313050 PAF1Q8N7H5 531 aa12.57□□□□□ -0.4
SEC16A-203ENST00000313050 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-203ENST00000313050 ZNHIT6Q9NWK9 470 aaKnown RBP12.57□□□□□ -0.4
SEC16A-203ENST00000313050 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
SEC16A-203ENST00000313050 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
SEC16A-203ENST00000313050 KIF2AO00139 706 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-203ENST00000313050 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
SEC16A-203ENST00000313050 IVLP07476 585 aa12.56□□□□□ -0.4
SEC16A-203ENST00000313050 UBXN4Q92575 508 aa12.56□□□□□ -0.4
SEC16A-203ENST00000313050 NOL10Q9BSC4 688 aaKnown RBP12.56□□□□□ -0.4
SEC16A-203ENST00000313050 RILPL2Q969X0 211 aa12.56□□□□□ -0.4
SEC16A-203ENST00000313050 SMC3Q9UQE7 1217 aa12.56□□□□□ -0.4
SEC16A-203ENST00000313050 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
SEC16A-203ENST00000313050 KINO60870 393 aaKnown RBP12.56□□□□□ -0.4
SEC16A-203ENST00000313050 RNF187Q5TA31 235 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-203ENST00000313050 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
SEC16A-203ENST00000313050 RUFY2Q8WXA3 655 aa12.55□□□□□ -0.4
SEC16A-203ENST00000313050 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
SEC16A-203ENST00000313050 DDX23Q9BUQ8 820 aaKnown RBP12.55□□□□□ -0.4
SEC16A-203ENST00000313050 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
SEC16A-203ENST00000313050 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 SDF4Q9BRK5 362 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 RRP7BPQ9NSQ0 103 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
SEC16A-203ENST00000313050 RNF168Q8IYW5 571 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-203ENST00000313050 TOMM22Q9NS69 142 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 VPS37CA5D8V6 355 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-203ENST00000313050 TXLNAP40222 546 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 SEPT14Q6ZU15 432 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 RSF1Q96T23 1441 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-203ENST00000313050 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-203ENST00000313050 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 CPLX1O14810 134 aa12.54□□□□□ -0.4
SEC16A-203ENST00000313050 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-203ENST00000313050 CCDC192P0DO97 292 aa12.53□□□□□ -0.4
SEC16A-203ENST00000313050 ZSCAN30Q86W11 494 aa12.53□□□□□ -0.4
SEC16A-203ENST00000313050 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
SEC16A-203ENST00000313050 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
SEC16A-203ENST00000313050 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
SEC16A-203ENST00000313050 PLEKHD1A6NEE1 506 aa12.53□□□□□ -0.4
SEC16A-203ENST00000313050 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEC16A-203ENST00000313050 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
SEC16A-203ENST00000313050 CLIP1P30622 1438 aa12.53□□□□□ -0.4
SEC16A-203ENST00000313050 TTC31Q49AM3 519 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-203ENST00000313050 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
SEC16A-203ENST00000313050 MAGEC2Q9UBF1 373 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-203ENST00000313050 ANKRD45Q5TZF3 282 aa12.52□□□□□ -0.4
SEC16A-203ENST00000313050 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.4
SEC16A-203ENST00000313050 NAP1L3Q99457 506 aaPredicted RBP12.52□□□□□ -0.4
SEC16A-203ENST00000313050 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.4
SEC16A-203ENST00000313050 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.4
SEC16A-203ENST00000313050 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
SEC16A-203ENST00000313050 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
SEC16A-203ENST00000313050 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
SEC16A-203ENST00000313050 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
SEC16A-203ENST00000313050 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-203ENST00000313050 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
SEC16A-203ENST00000313050 SYCP1Q15431 976 aa12.51□□□□□ -0.41
SEC16A-203ENST00000313050 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
SEC16A-203ENST00000313050 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
SEC16A-203ENST00000313050 CCDC160A6NGH7 325 aa12.51□□□□□ -0.41
SEC16A-203ENST00000313050 GOLIM4O00461 696 aa12.51□□□□□ -0.41
SEC16A-203ENST00000313050 HSPA4P34932 840 aa12.51□□□□□ -0.41
SEC16A-203ENST00000313050 PPFIBP1Q86W92 1011 aa12.51□□□□□ -0.41
SEC16A-203ENST00000313050 C6orf163Q5TEZ5 329 aa12.5□□□□□ -0.41
SEC16A-203ENST00000313050 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
SEC16A-203ENST00000313050 ANO2Q9NQ90 1003 aa12.5□□□□□ -0.41
SEC16A-203ENST00000313050 ANKRD18BA2A2Z9 1011 aa12.5□□□□□ -0.41
SEC16A-203ENST00000313050 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
SEC16A-203ENST00000313050 ARID4AP29374 1257 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-203ENST00000313050 MIPOL1Q8TD10 442 aa12.49□□□□□ -0.41
SEC16A-203ENST00000313050 ZFYP08048 801 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-203ENST00000313050 C22orf23Q9BZE7 217 aa12.49□□□□□ -0.41
SEC16A-203ENST00000313050 FAM177A1Q8N128 213 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-203ENST00000313050 FAM184BQ9ULE4 1060 aa12.49□□□□□ -0.41
SEC16A-203ENST00000313050 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
SEC16A-203ENST00000313050 CCDC43Q96MW1 224 aaKnown RBP12.49□□□□□ -0.41
SEC16A-203ENST00000313050 FILIP1Q7Z7B0 1213 aa12.49□□□□□ -0.41
SEC16A-203ENST00000313050 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
SEC16A-203ENST00000313050 POGKQ9P215 609 aa12.48□□□□□ -0.41
SEC16A-203ENST00000313050 SERPINC1P01008 464 aa12.48□□□□□ -0.41
SEC16A-203ENST00000313050 GCOM1H8Y6P7 765 aaPredicted RBP12.48□□□□□ -0.41
SEC16A-203ENST00000313050 MYZAPP0CAP1 466 aa12.48□□□□□ -0.41
SEC16A-203ENST00000313050 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
SEC16A-203ENST00000313050 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
SEC16A-203ENST00000313050 CBFA2T2O43439 604 aa12.48□□□□□ -0.41
SEC16A-203ENST00000313050 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
SEC16A-203ENST00000313050 ZWINTO95229 277 aa12.48□□□□□ -0.41
SEC16A-203ENST00000313050 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
SEC16A-203ENST00000313050 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
SEC16A-203ENST00000313050 PSMD1Q99460 953 aa12.47□□□□□ -0.41
SEC16A-203ENST00000313050 ZCCHC6Q5VYS8 1495 aaKnown RBP12.47□□□□□ -0.41
SEC16A-203ENST00000313050 A0A1B0GUA9 196 aa12.47□□□□□ -0.41
SEC16A-203ENST00000313050 LMAN1P49257 510 aa12.47□□□□□ -0.41
SEC16A-203ENST00000313050 ZBED9Q6R2W3 1325 aa12.46□□□□□ -0.41
SEC16A-203ENST00000313050 PDCP20941 246 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms