RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
CLCN6-201ENST00000312413 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
CLCN6-201ENST00000312413 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
CLCN6-201ENST00000312413 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
CLCN6-201ENST00000312413 PANK1Q8TE04 598 aa16.49■□□□□ 0.23
CLCN6-201ENST00000312413 PDILTQ8N807 584 aa16.49■□□□□ 0.23
CLCN6-201ENST00000312413 TSPY26PQ9H489 355 aa16.49■□□□□ 0.23
CLCN6-201ENST00000312413 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
CLCN6-201ENST00000312413 RDXP35241 583 aaKnown RBP16.48■□□□□ 0.23
CLCN6-201ENST00000312413 ERICH2A1L162 156 aa16.48■□□□□ 0.23
CLCN6-201ENST00000312413 FOSBP53539 338 aa16.48■□□□□ 0.23
CLCN6-201ENST00000312413 GNAI1P63096 354 aa16.47■□□□□ 0.23
CLCN6-201ENST00000312413 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
CLCN6-201ENST00000312413 TCEAL9Q9UHQ7 104 aa16.47■□□□□ 0.23
CLCN6-201ENST00000312413 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
CLCN6-201ENST00000312413 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
CLCN6-201ENST00000312413 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLCN6-201ENST00000312413 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
CLCN6-201ENST00000312413 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
CLCN6-201ENST00000312413 CCP110O43303 1012 aa16.46■□□□□ 0.23
CLCN6-201ENST00000312413 VGFO15240 615 aaPredicted RBP16.46■□□□□ 0.23
CLCN6-201ENST00000312413 NECTIN2Q92692 538 aa16.46■□□□□ 0.23
CLCN6-201ENST00000312413 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
CLCN6-201ENST00000312413 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
CLCN6-201ENST00000312413 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
CLCN6-201ENST00000312413 PSMA5P28066 241 aa16.45■□□□□ 0.22
CLCN6-201ENST00000312413 LEKR1Q6ZMV7 388 aa16.45■□□□□ 0.22
CLCN6-201ENST00000312413 MCM2P49736 904 aa16.44■□□□□ 0.22
CLCN6-201ENST00000312413 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
CLCN6-201ENST00000312413 OFD1O75665 1012 aa16.44■□□□□ 0.22
CLCN6-201ENST00000312413 KIF7Q2M1P5 1343 aa16.44■□□□□ 0.22
CLCN6-201ENST00000312413 CT47A1Q5JQC4 288 aaPredicted RBP16.44■□□□□ 0.22
CLCN6-201ENST00000312413 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
CLCN6-201ENST00000312413 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
CLCN6-201ENST00000312413 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
CLCN6-201ENST00000312413 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
CLCN6-201ENST00000312413 RABEP1Q15276 862 aa16.43■□□□□ 0.22
CLCN6-201ENST00000312413 RAD21O60216 631 aa16.42■□□□□ 0.22
CLCN6-201ENST00000312413 SMC2O95347 1197 aa16.42■□□□□ 0.22
CLCN6-201ENST00000312413 PDCP20941 246 aa16.42■□□□□ 0.22
CLCN6-201ENST00000312413 NEK4P51957 841 aa16.42■□□□□ 0.22
CLCN6-201ENST00000312413 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
CLCN6-201ENST00000312413 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
CLCN6-201ENST00000312413 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
CLCN6-201ENST00000312413 TSPYL1Q9H0U9 437 aa16.41■□□□□ 0.22
CLCN6-201ENST00000312413 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
CLCN6-201ENST00000312413 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
CLCN6-201ENST00000312413 MYO6Q9UM54 1294 aa16.4■□□□□ 0.22
CLCN6-201ENST00000312413 SMARCA4P51532 1647 aa16.4■□□□□ 0.22
CLCN6-201ENST00000312413 TSPYL4Q9UJ04 414 aa16.4■□□□□ 0.22
CLCN6-201ENST00000312413 CNTROBQ8N137 903 aa16.39■□□□□ 0.22
CLCN6-201ENST00000312413 AXDND1Q5T1B0 1012 aaPredicted RBP16.39■□□□□ 0.21
CLCN6-201ENST00000312413 SMARCE1Q969G3 411 aa16.39■□□□□ 0.21
CLCN6-201ENST00000312413 TRIM34Q9BYJ4 488 aa16.39■□□□□ 0.21
CLCN6-201ENST00000312413 BRMS1Q9HCU9 246 aa16.39■□□□□ 0.21
CLCN6-201ENST00000312413 ODF2Q5BJF6 829 aa16.39■□□□□ 0.21
CLCN6-201ENST00000312413 GRPEL1Q9HAV7 217 aa16.39■□□□□ 0.21
CLCN6-201ENST00000312413 PDZRN3Q9UPQ7 1066 aa16.39■□□□□ 0.21
CLCN6-201ENST00000312413 FILIP1LQ4L180 1135 aa16.38■□□□□ 0.21
CLCN6-201ENST00000312413 VPS37DQ86XT2 251 aa16.38■□□□□ 0.21
CLCN6-201ENST00000312413 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
CLCN6-201ENST00000312413 FIBPO43427 364 aa16.38■□□□□ 0.21
CLCN6-201ENST00000312413 XBP1P17861 261 aa16.38■□□□□ 0.21
CLCN6-201ENST00000312413 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
CLCN6-201ENST00000312413 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
CLCN6-201ENST00000312413 CCDC112Q8NEF3 446 aa16.38■□□□□ 0.21
CLCN6-201ENST00000312413 EPS15P42566 896 aa16.38■□□□□ 0.21
CLCN6-201ENST00000312413 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
CLCN6-201ENST00000312413 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
CLCN6-201ENST00000312413 RRP9O43818 475 aaKnown RBP16.37■□□□□ 0.21
CLCN6-201ENST00000312413 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
CLCN6-201ENST00000312413 CWC22Q9HCG8 908 aaKnown RBP16.37■□□□□ 0.21
CLCN6-201ENST00000312413 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
CLCN6-201ENST00000312413 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
CLCN6-201ENST00000312413 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
CLCN6-201ENST00000312413 NEUROD6Q96NK8 337 aa16.36■□□□□ 0.21
CLCN6-201ENST00000312413 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
CLCN6-201ENST00000312413 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
CLCN6-201ENST00000312413 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
CLCN6-201ENST00000312413 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
CLCN6-201ENST00000312413 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
CLCN6-201ENST00000312413 UQCRHLA0A096LP55 91 aa16.35■□□□□ 0.21
CLCN6-201ENST00000312413 ESPNB1AK53 854 aa16.35■□□□□ 0.21
CLCN6-201ENST00000312413 UQCRHP07919 91 aa16.35■□□□□ 0.21
CLCN6-201ENST00000312413 CDCA7LQ96GN5 454 aa16.35■□□□□ 0.21
CLCN6-201ENST00000312413 PDE3AQ14432 1141 aa16.34■□□□□ 0.21
CLCN6-201ENST00000312413 ZNF396Q96N95 335 aaPredicted RBP16.34■□□□□ 0.21
CLCN6-201ENST00000312413 GNAI3P08754 354 aa16.34■□□□□ 0.21
CLCN6-201ENST00000312413 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
CLCN6-201ENST00000312413 HMOX1P09601 288 aa16.33■□□□□ 0.2
CLCN6-201ENST00000312413 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
CLCN6-201ENST00000312413 ZFYVE27Q5T4F4 411 aa16.32■□□□□ 0.2
CLCN6-201ENST00000312413 KIAA0754O94854 1291 aa16.32■□□□□ 0.2
CLCN6-201ENST00000312413 STK38Q15208 465 aa16.32■□□□□ 0.2
CLCN6-201ENST00000312413 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
CLCN6-201ENST00000312413 HSP90AB3PQ58FF7 597 aa16.32■□□□□ 0.2
CLCN6-201ENST00000312413 K7ELQ4 463 aaPredicted RBP16.31■□□□□ 0.2
CLCN6-201ENST00000312413 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
CLCN6-201ENST00000312413 RIC3Q7Z5B4 369 aa16.31■□□□□ 0.2
CLCN6-201ENST00000312413 HIP1O00291 1037 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms