RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 INSRP06213 1382 aa31.91■■■□□ 2.7
SNCB-201ENST00000310112 THEMISQ8N1K5 641 aaPredicted RBP31.91■■■□□ 2.7
SNCB-201ENST00000310112 USP32Q8NFA0 1604 aa31.9■■■□□ 2.7
SNCB-201ENST00000310112 FAM135BQ49AJ0 1406 aa31.89■■■□□ 2.7
SNCB-201ENST00000310112 RIMS1Q86UR5 1692 aaKnown RBP31.88■■■□□ 2.69
SNCB-201ENST00000310112 ZBED9Q6R2W3 1325 aa31.87■■■□□ 2.69
SNCB-201ENST00000310112 ANKRD36BQ8N2N9 1353 aa31.86■■■□□ 2.69
SNCB-201ENST00000310112 CPS1P31327 1500 aa31.85■■■□□ 2.69
SNCB-201ENST00000310112 ADAMTS13Q76LX8 1427 aa31.84■■■□□ 2.69
SNCB-201ENST00000310112 METP08581 1390 aa31.84■■■□□ 2.69
SNCB-201ENST00000310112 TXNDC2Q86VQ3 553 aa31.83■■■□□ 2.69
SNCB-201ENST00000310112 CARD14Q9BXL6 1004 aa31.83■■■□□ 2.69
SNCB-201ENST00000310112 MED14O60244 1454 aa31.83■■■□□ 2.69
SNCB-201ENST00000310112 DIP2AQ14689 1571 aa31.82■■■□□ 2.68
SNCB-201ENST00000310112 SLC12A5Q9H2X9 1139 aa31.81■■■□□ 2.68
SNCB-201ENST00000310112 CEP170BQ9Y4F5 1589 aaPredicted RBP31.8■■■□□ 2.68
SNCB-201ENST00000310112 SRPK2P78362 688 aaKnown RBP31.8■■■□□ 2.68
SNCB-201ENST00000310112 BCANQ96GW7 911 aa31.8■■■□□ 2.68
SNCB-201ENST00000310112 NSD3Q9BZ95 1437 aa31.79■■■□□ 2.68
SNCB-201ENST00000310112 MINK1Q8N4C8 1332 aaPredicted RBP31.79■■■□□ 2.68
SNCB-201ENST00000310112 NSD2O96028 1365 aa31.79■■■□□ 2.68
SNCB-201ENST00000310112 LTKP29376 864 aa31.79■■■□□ 2.68
SNCB-201ENST00000310112 PPP2R1AP30153 589 aa31.79■■■□□ 2.68
SNCB-201ENST00000310112 SAFB2Q14151 953 aaKnown RBP eCLIP31.79■■■□□ 2.68
SNCB-201ENST00000310112 SENP3Q9H4L4 574 aaPredicted RBP31.78■■■□□ 2.68
SNCB-201ENST00000310112 CABP2Q9NPB3 220 aa31.77■■■□□ 2.68
SNCB-201ENST00000310112 ZNF142P52746 1687 aaPredicted RBP31.76■■■□□ 2.68
SNCB-201ENST00000310112 TBX22Q9Y458 520 aa31.75■■■□□ 2.67
SNCB-201ENST00000310112 CGNL1Q0VF96 1302 aa31.75■■■□□ 2.67
SNCB-201ENST00000310112 CDK19Q9BWU1 502 aa31.74■■■□□ 2.67
SNCB-201ENST00000310112 SETD1BQ9UPS6 1966 aaKnown RBP31.74■■■□□ 2.67
SNCB-201ENST00000310112 TERF2IPQ9NYB0 399 aa31.73■■■□□ 2.67
SNCB-201ENST00000310112 WAPLQ7Z5K2 1190 aa31.69■■■□□ 2.66
SNCB-201ENST00000310112 PLEKHH1Q9ULM0 1364 aa31.68■■■□□ 2.66
SNCB-201ENST00000310112 PLPPR3Q6T4P5 718 aa31.67■■■□□ 2.66
SNCB-201ENST00000310112 ATP7BP35670 1465 aa31.66■■■□□ 2.66
SNCB-201ENST00000310112 PIK3R4Q99570 1358 aa31.66■■■□□ 2.66
SNCB-201ENST00000310112 HDGFL2Q7Z4V5 671 aaPredicted RBP31.66■■■□□ 2.66
SNCB-201ENST00000310112 ADGRB2O60241 1585 aa31.65■■■□□ 2.66
SNCB-201ENST00000310112 WASLO00401 505 aaPredicted RBP31.65■■■□□ 2.66
SNCB-201ENST00000310112 A0A1W2PP64 1363 aa31.64■■■□□ 2.66
SNCB-201ENST00000310112 BLMP54132 1417 aaPredicted RBP31.64■■■□□ 2.65
SNCB-201ENST00000310112 MORC1Q86VD1 984 aa31.63■■■□□ 2.65
SNCB-201ENST00000310112 PTCH1Q13635 1447 aa31.62■■■□□ 2.65
SNCB-201ENST00000310112 CD163L1Q9NR16 1453 aa31.6■■■□□ 2.65
SNCB-201ENST00000310112 ROBO2Q9HCK4 1378 aa31.6■■■□□ 2.65
SNCB-201ENST00000310112 POLR3AO14802 1390 aaPredicted RBP31.59■■■□□ 2.65
SNCB-201ENST00000310112 WDR43Q15061 677 aaKnown RBP eCLIP31.58■■■□□ 2.65
SNCB-201ENST00000310112 ANKLE2Q86XL3 938 aa31.57■■■□□ 2.64
SNCB-201ENST00000310112 PTPRUQ92729 1446 aa31.57■■■□□ 2.64
SNCB-201ENST00000310112 SLC26A8Q96RN1 970 aa31.56■■■□□ 2.64
SNCB-201ENST00000310112 ANKRD26Q9UPS8 1709 aa31.55■■■□□ 2.64
SNCB-201ENST00000310112 CABP1Q9NZU7 370 aa31.54■■■□□ 2.64
SNCB-201ENST00000310112 SMG6Q86US8 1419 aaKnown RBP31.54■■■□□ 2.64
SNCB-201ENST00000310112 XRN1Q8IZH2 1706 aaKnown RBP31.53■■■□□ 2.64
SNCB-201ENST00000310112 AMOTL2Q9Y2J4 779 aa31.53■■■□□ 2.64
SNCB-201ENST00000310112 NEFLP07196 543 aa31.52■■■□□ 2.64
SNCB-201ENST00000310112 PDE3BQ13370 1112 aa31.52■■■□□ 2.64
SNCB-201ENST00000310112 CCDC61Q9Y6R9 512 aa31.51■■■□□ 2.63
SNCB-201ENST00000310112 CPSF1Q10570 1443 aaKnown RBP31.49■■■□□ 2.63
SNCB-201ENST00000310112 PPIP5K1Q6PFW1 1433 aa31.49■■■□□ 2.63
SNCB-201ENST00000310112 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.49■■■□□ 2.63
SNCB-201ENST00000310112 NUDT16Q96DE0 195 aaKnown RBP31.49■■■□□ 2.63
SNCB-201ENST00000310112 CDC42BPGQ6DT37 1551 aa31.48■■■□□ 2.63
SNCB-201ENST00000310112 ADAMTS8Q9UP79 889 aa31.47■■■□□ 2.63
SNCB-201ENST00000310112 KIF20BQ96Q89 1820 aa31.46■■■□□ 2.63
SNCB-201ENST00000310112 CFAP53Q96M91 514 aa31.46■■■□□ 2.63
SNCB-201ENST00000310112 EDC4Q6P2E9 1401 aaKnown RBP31.46■■■□□ 2.63
SNCB-201ENST00000310112 ZNF692Q9BU19 519 aaPredicted RBP31.45■■■□□ 2.63
SNCB-201ENST00000310112 NUDCQ9Y266 331 aa31.45■■■□□ 2.63
SNCB-201ENST00000310112 NGEFQ8N5V2 710 aa31.44■■■□□ 2.62
SNCB-201ENST00000310112 FYB1O15117 783 aa31.43■■■□□ 2.62
SNCB-201ENST00000310112 AKAP12Q02952 1782 aa31.41■■■□□ 2.62
SNCB-201ENST00000310112 TOPAZ1Q8N9V7 1692 aa31.41■■■□□ 2.62
SNCB-201ENST00000310112 ITSN1Q15811 1721 aa31.4■■■□□ 2.62
SNCB-201ENST00000310112 MON2Q7Z3U7 1717 aa31.4■■■□□ 2.62
SNCB-201ENST00000310112 SUPT16HQ9Y5B9 1047 aaKnown RBP31.39■■■□□ 2.62
SNCB-201ENST00000310112 CHD2O14647 1828 aaKnown RBP31.38■■■□□ 2.61
SNCB-201ENST00000310112 PLEKHG3A1L390 1219 aa31.38■■■□□ 2.61
SNCB-201ENST00000310112 MTHFSP49914 203 aa31.36■■■□□ 2.61
SNCB-201ENST00000310112 PRR36Q9H6K5 1346 aa31.35■■■□□ 2.61
SNCB-201ENST00000310112 NPHP4O75161 1426 aaPredicted RBP31.35■■■□□ 2.61
SNCB-201ENST00000310112 GGNBP2Q9H3C7 697 aa31.35■■■□□ 2.61
SNCB-201ENST00000310112 SHPRHQ149N8 1683 aa31.34■■■□□ 2.61
SNCB-201ENST00000310112 ANKARQ7Z5J8 1434 aa31.33■■■□□ 2.61
SNCB-201ENST00000310112 TNNT2P45379 298 aaPredicted RBP31.32■■■□□ 2.6
SNCB-201ENST00000310112 ERICH6BQ5W0A0 696 aa31.32■■■□□ 2.6
SNCB-201ENST00000310112 FKBP8Q14318 412 aa31.3■■■□□ 2.6
SNCB-201ENST00000310112 KCNA6P17658 529 aa31.3■■■□□ 2.6
SNCB-201ENST00000310112 NCBP3Q53F19 620 aaKnown RBP31.26■■■□□ 2.59
SNCB-201ENST00000310112 NRKQ7Z2Y5 1582 aa31.24■■■□□ 2.59
SNCB-201ENST00000310112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.24■■■□□ 2.59
SNCB-201ENST00000310112 AATKQ6ZMQ8 1374 aa31.24■■■□□ 2.59
SNCB-201ENST00000310112 PNPLA6Q8IY17 1366 aa31.23■■■□□ 2.59
SNCB-201ENST00000310112 FMN2Q9NZ56 1722 aa31.23■■■□□ 2.59
SNCB-201ENST00000310112 COL3A1P02461 1466 aaPredicted RBP31.21■■■□□ 2.59
SNCB-201ENST00000310112 ACEP12821 1306 aa31.21■■■□□ 2.59
SNCB-201ENST00000310112 USP6P35125 1406 aa31.21■■■□□ 2.59
SNCB-201ENST00000310112 NWD1Q149M9 1564 aa31.21■■■□□ 2.59
SNCB-201ENST00000310112 ZNF521Q96K83 1311 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms