RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 WDR43Q15061 677 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRIM59-201ENST00000309784 PLEKHG1Q9ULL1 1385 aa14.94□□□□□ -0.02
TRIM59-201ENST00000309784 KDM5AP29375 1690 aaKnown RBP14.94□□□□□ -0.02
TRIM59-201ENST00000309784 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
TRIM59-201ENST00000309784 NSD3Q9BZ95 1437 aa14.93□□□□□ -0.02
TRIM59-201ENST00000309784 CGNL1Q0VF96 1302 aa14.93□□□□□ -0.02
TRIM59-201ENST00000309784 ATAD2Q6PL18 1390 aa14.93□□□□□ -0.02
TRIM59-201ENST00000309784 ABCC11Q96J66 1382 aa14.93□□□□□ -0.02
TRIM59-201ENST00000309784 CARD14Q9BXL6 1004 aa14.92□□□□□ -0.02
TRIM59-201ENST00000309784 QRICH2Q9H0J4 1663 aa14.92□□□□□ -0.02
TRIM59-201ENST00000309784 TBX22Q9Y458 520 aa14.92□□□□□ -0.02
TRIM59-201ENST00000309784 WASLO00401 505 aaPredicted RBP14.92□□□□□ -0.02
TRIM59-201ENST00000309784 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
TRIM59-201ENST00000309784 HSPA2P54652 639 aa14.92□□□□□ -0.02
TRIM59-201ENST00000309784 ASXL1Q8IXJ9 1541 aa14.91□□□□□ -0.02
TRIM59-201ENST00000309784 NCKAP5LQ9HCH0 1330 aa14.91□□□□□ -0.02
TRIM59-201ENST00000309784 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
TRIM59-201ENST00000309784 GGNBP2Q9H3C7 697 aa14.91□□□□□ -0.02
TRIM59-201ENST00000309784 PPM1GO15355 546 aaPredicted RBP14.9□□□□□ -0.02
TRIM59-201ENST00000309784 KCNA6P17658 529 aa14.9□□□□□ -0.02
TRIM59-201ENST00000309784 NUDT16Q96DE0 195 aaKnown RBP14.9□□□□□ -0.02
TRIM59-201ENST00000309784 PTPRMP28827 1452 aa14.9□□□□□ -0.02
TRIM59-201ENST00000309784 PPP2R1AP30153 589 aa14.9□□□□□ -0.02
TRIM59-201ENST00000309784 BRD4O60885 1362 aaPredicted RBP14.88□□□□□ -0.03
TRIM59-201ENST00000309784 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
TRIM59-201ENST00000309784 ROBO2Q9HCK4 1378 aa14.88□□□□□ -0.03
TRIM59-201ENST00000309784 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
TRIM59-201ENST00000309784 ADAMTS13Q76LX8 1427 aa14.88□□□□□ -0.03
TRIM59-201ENST00000309784 SETD1BQ9UPS6 1966 aaKnown RBP14.87□□□□□ -0.03
TRIM59-201ENST00000309784 PARD3Q8TEW0 1356 aa14.87□□□□□ -0.03
TRIM59-201ENST00000309784 NGDNQ8NEJ9 315 aaKnown RBP14.87□□□□□ -0.03
TRIM59-201ENST00000309784 PMFBP1Q8TBY8 1022 aa14.87□□□□□ -0.03
TRIM59-201ENST00000309784 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
TRIM59-201ENST00000309784 ARHGEF28Q8N1W1 1705 aaKnown RBP14.87□□□□□ -0.03
TRIM59-201ENST00000309784 SOX12O15370 315 aa14.87□□□□□ -0.03
TRIM59-201ENST00000309784 MYO3AQ8NEV4 1616 aa14.86□□□□□ -0.03
TRIM59-201ENST00000309784 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
TRIM59-201ENST00000309784 NEFLP07196 543 aa14.85□□□□□ -0.03
TRIM59-201ENST00000309784 ANKRD36BQ8N2N9 1353 aa14.85□□□□□ -0.03
TRIM59-201ENST00000309784 TULP4Q9NRJ4 1543 aa14.85□□□□□ -0.03
TRIM59-201ENST00000309784 CFAP53Q96M91 514 aa14.85□□□□□ -0.03
TRIM59-201ENST00000309784 PUS7Q96PZ0 661 aaKnown RBP14.85□□□□□ -0.03
TRIM59-201ENST00000309784 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
TRIM59-201ENST00000309784 PROSER2Q86WR7 435 aaPredicted RBP14.83□□□□□ -0.03
TRIM59-201ENST00000309784 ADAMTSL3P82987 1691 aa14.83□□□□□ -0.04
TRIM59-201ENST00000309784 PPIP5K1Q6PFW1 1433 aa14.82□□□□□ -0.04
TRIM59-201ENST00000309784 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
TRIM59-201ENST00000309784 SLIT1O75093 1534 aa14.82□□□□□ -0.04
TRIM59-201ENST00000309784 ARHGAP23Q9P227 1491 aa14.81□□□□□ -0.04
TRIM59-201ENST00000309784 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
TRIM59-201ENST00000309784 MTHFSP49914 203 aa14.81□□□□□ -0.04
TRIM59-201ENST00000309784 SIRT1Q96EB6 747 aa14.81□□□□□ -0.04
TRIM59-201ENST00000309784 NINLQ9Y2I6 1382 aa14.81□□□□□ -0.04
TRIM59-201ENST00000309784 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
TRIM59-201ENST00000309784 CCDC146Q8IYE0 955 aa14.8□□□□□ -0.04
TRIM59-201ENST00000309784 FAM135BQ49AJ0 1406 aa14.8□□□□□ -0.04
TRIM59-201ENST00000309784 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
TRIM59-201ENST00000309784 NPHP4O75161 1426 aaPredicted RBP14.8□□□□□ -0.04
TRIM59-201ENST00000309784 PTPRUQ92729 1446 aa14.8□□□□□ -0.04
TRIM59-201ENST00000309784 ADAMTS8Q9UP79 889 aa14.79□□□□□ -0.04
TRIM59-201ENST00000309784 NRXN3Q9Y4C0 1643 aa14.79□□□□□ -0.04
TRIM59-201ENST00000309784 DLC1Q96QB1 1528 aa14.78□□□□□ -0.04
TRIM59-201ENST00000309784 COG3Q96JB2 828 aa14.78□□□□□ -0.04
TRIM59-201ENST00000309784 FYB1O15117 783 aa14.78□□□□□ -0.04
TRIM59-201ENST00000309784 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
TRIM59-201ENST00000309784 NME9Q86XW9 330 aa14.78□□□□□ -0.04
TRIM59-201ENST00000309784 KDM4FA0A1W2PPD8 638 aa14.77□□□□□ -0.04
TRIM59-201ENST00000309784 ACEP12821 1306 aa14.77□□□□□ -0.04
TRIM59-201ENST00000309784 FBLN1P23142 703 aa14.77□□□□□ -0.05
TRIM59-201ENST00000309784 ESCO1Q5FWF5 840 aa14.77□□□□□ -0.05
TRIM59-201ENST00000309784 PRR36Q9H6K5 1346 aa14.76□□□□□ -0.05
TRIM59-201ENST00000309784 U2AF1L5P0DN76 240 aaPredicted RBP14.76□□□□□ -0.05
TRIM59-201ENST00000309784 U2AF1Q01081 240 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRIM59-201ENST00000309784 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
TRIM59-201ENST00000309784 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
TRIM59-201ENST00000309784 MYOM1P52179 1685 aa14.76□□□□□ -0.05
TRIM59-201ENST00000309784 ZBED9Q6R2W3 1325 aa14.75□□□□□ -0.05
TRIM59-201ENST00000309784 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
TRIM59-201ENST00000309784 NUDCQ9Y266 331 aa14.75□□□□□ -0.05
TRIM59-201ENST00000309784 NPC1L1Q9UHC9 1359 aa14.75□□□□□ -0.05
TRIM59-201ENST00000309784 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
TRIM59-201ENST00000309784 TECPR2O15040 1411 aa14.75□□□□□ -0.05
TRIM59-201ENST00000309784 SUPT16HQ9Y5B9 1047 aaKnown RBP14.73□□□□□ -0.05
TRIM59-201ENST00000309784 NEFMP07197 916 aa14.73□□□□□ -0.05
TRIM59-201ENST00000309784 PIK3R4Q99570 1358 aa14.72□□□□□ -0.05
TRIM59-201ENST00000309784 NSD2O96028 1365 aa14.72□□□□□ -0.05
TRIM59-201ENST00000309784 PSME1Q06323 249 aa14.72□□□□□ -0.05
TRIM59-201ENST00000309784 ATF3P18847 181 aa14.72□□□□□ -0.05
TRIM59-201ENST00000309784 IRX6P78412 446 aaPredicted RBP14.72□□□□□ -0.05
TRIM59-201ENST00000309784 FKBP8Q14318 412 aa14.72□□□□□ -0.05
TRIM59-201ENST00000309784 XPCQ01831 940 aaPredicted RBP14.71□□□□□ -0.05
TRIM59-201ENST00000309784 CPS1P31327 1500 aa14.71□□□□□ -0.06
TRIM59-201ENST00000309784 SETD1AO15047 1707 aaKnown RBP14.71□□□□□ -0.06
TRIM59-201ENST00000309784 RRS1Q15050 365 aaKnown RBP14.7□□□□□ -0.06
TRIM59-201ENST00000309784 MED14O60244 1454 aa14.7□□□□□ -0.06
TRIM59-201ENST00000309784 APAF1O14727 1248 aa14.7□□□□□ -0.06
TRIM59-201ENST00000309784 NLRP6P59044 892 aa14.7□□□□□ -0.06
TRIM59-201ENST00000309784 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
TRIM59-201ENST00000309784 RRP7AQ9Y3A4 280 aaKnown RBP14.69□□□□□ -0.06
TRIM59-201ENST00000309784 PTCH1Q13635 1447 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms