RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 CHMP5Q9NZZ3 219 aa10.02□□□□□ -0.81
PPARGC1B-201ENST00000309241 INCENPQ9NQS7 918 aa10.02□□□□□ -0.81
PPARGC1B-201ENST00000309241 POLR3GO15318 223 aaPredicted RBP10.02□□□□□ -0.81
PPARGC1B-201ENST00000309241 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
PPARGC1B-201ENST00000309241 TEFQ10587 303 aa10.02□□□□□ -0.81
PPARGC1B-201ENST00000309241 ZRSR2Q15696 482 aaKnown RBP10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 RRP1P56182 461 aaKnown RBP10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 C9orf78Q9NZ63 289 aaPredicted RBP10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 KIF3BO15066 747 aa10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 ATF3P18847 181 aa10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 PSME1Q06323 249 aa10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 KIF21BO75037 1637 aa10.01□□□□□ -0.81
PPARGC1B-201ENST00000309241 NUP155O75694 1391 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 CPLX2Q6PUV4 134 aaKnown RBP10□□□□□ -0.81
PPARGC1B-201ENST00000309241 RRP12Q5JTH9 1297 aaKnown RBP10□□□□□ -0.81
PPARGC1B-201ENST00000309241 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 GPATCH11Q8N954 259 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 DNAJC2Q99543 621 aaKnown RBP10□□□□□ -0.81
PPARGC1B-201ENST00000309241 HMGB1P1B2RPK0 211 aaPredicted RBP10□□□□□ -0.81
PPARGC1B-201ENST00000309241 LEKR1Q6ZMV7 388 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 GRPEL1Q9HAV7 217 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 TNNT1P13805 278 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 RBM25P49756 843 aaKnown RBP10□□□□□ -0.81
PPARGC1B-201ENST00000309241 IKQ13123 557 aaPredicted RBP10□□□□□ -0.81
PPARGC1B-201ENST00000309241 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 ERICH3Q5RHP9 1530 aa10□□□□□ -0.81
PPARGC1B-201ENST00000309241 CT47B1P0C2W7 299 aaPredicted RBP10□□□□□ -0.81
PPARGC1B-201ENST00000309241 NFXL1Q6ZNB6 911 aa9.99□□□□□ -0.81
PPARGC1B-201ENST00000309241 COG3Q96JB2 828 aa9.99□□□□□ -0.81
PPARGC1B-201ENST00000309241 CBX1P83916 185 aa9.99□□□□□ -0.81
PPARGC1B-201ENST00000309241 IQCEQ6IPM2 695 aa9.99□□□□□ -0.81
PPARGC1B-201ENST00000309241 EPS15P42566 896 aa9.99□□□□□ -0.81
PPARGC1B-201ENST00000309241 CPLX1O14810 134 aa9.99□□□□□ -0.81
PPARGC1B-201ENST00000309241 CIZ1Q9ULV3 898 aaPredicted RBP9.99□□□□□ -0.81
PPARGC1B-201ENST00000309241 CENPJQ9HC77 1338 aaPredicted RBP9.98□□□□□ -0.81
PPARGC1B-201ENST00000309241 PDCP20941 246 aa9.98□□□□□ -0.81
PPARGC1B-201ENST00000309241 MCM5P33992 734 aa9.98□□□□□ -0.81
PPARGC1B-201ENST00000309241 CALCOCO1Q9P1Z2 691 aa9.98□□□□□ -0.81
PPARGC1B-201ENST00000309241 TRDNQ13061 729 aa9.98□□□□□ -0.81
PPARGC1B-201ENST00000309241 DHX29Q7Z478 1369 aaKnown RBP9.98□□□□□ -0.81
PPARGC1B-201ENST00000309241 ERICH2A1L162 156 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 TUBB4BP68371 445 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 ZSCAN30Q86W11 494 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 PDS5BQ9NTI5 1447 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 VGLL3A8MV65 326 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 TRAK2O60296 914 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 RILPL2Q969X0 211 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 ZFYVE27Q5T4F4 411 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 RUFY1Q96T51 708 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 CARMIL1Q5VZK9 1371 aa9.97□□□□□ -0.81
PPARGC1B-201ENST00000309241 HSPA5P11021 654 aaKnown RBP9.96□□□□□ -0.81
PPARGC1B-201ENST00000309241 MCM3P25205 808 aa9.96□□□□□ -0.81
PPARGC1B-201ENST00000309241 ZNF526Q8TF50 670 aaPredicted RBP9.96□□□□□ -0.81
PPARGC1B-201ENST00000309241 FYB1O15117 783 aa9.96□□□□□ -0.81
PPARGC1B-201ENST00000309241 EIF3JO75822 258 aaKnown RBP9.96□□□□□ -0.81
PPARGC1B-201ENST00000309241 DDX19BQ9UMR2 479 aa9.96□□□□□ -0.81
PPARGC1B-201ENST00000309241 BECN2A8MW95 431 aa9.96□□□□□ -0.82
PPARGC1B-201ENST00000309241 RABEP1Q15276 862 aa9.96□□□□□ -0.82
PPARGC1B-201ENST00000309241 NAP1L1P55209 391 aaKnown RBP9.96□□□□□ -0.82
PPARGC1B-201ENST00000309241 GIMAP7Q8NHV1 300 aa9.96□□□□□ -0.82
PPARGC1B-201ENST00000309241 MNS1Q8NEH6 495 aa9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 TRERF1Q96PN7 1200 aa9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 LUC7LQ9NQ29 371 aaKnown RBP9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 CAVIN2O95810 425 aa9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 TIGD1Q96MW7 591 aa9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 TUBB4AP04350 444 aa9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 AKNAQ7Z591 1439 aa9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 DDX58O95786 925 aaKnown RBP9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 EIF2S2P20042 333 aaKnown RBP9.95□□□□□ -0.82
PPARGC1B-201ENST00000309241 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 BRD2P25440 801 aaKnown RBP9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 SASS6Q6UVJ0 657 aa9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 CCDC27Q2M243 656 aa9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 ERLIN1O75477 346 aa9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 PPP4R3BQ5MIZ7 849 aa9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 CCDC146Q8IYE0 955 aa9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 BRD4O60885 1362 aaPredicted RBP9.94□□□□□ -0.82
PPARGC1B-201ENST00000309241 GTF2A1P52655 376 aaPredicted RBP9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 RAB3GAP2Q9H2M9 1393 aa9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 HSP90AB4PQ58FF6 505 aa9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 HSP90AB2PQ58FF8 381 aa9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 IFIT2P09913 472 aaKnown RBP9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 HOMER1Q86YM7 354 aa9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 IPO4Q8TEX9 1081 aaKnown RBP9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 DYNC1I1O14576 645 aa9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 ZKSCAN1P17029 563 aaPredicted RBP9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 SAFBQ15424 915 aaKnown RBP eCLIP9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 AXDND1Q5T1B0 1012 aaPredicted RBP9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 EFCAB5A4FU69 1503 aa9.93□□□□□ -0.82
PPARGC1B-201ENST00000309241 ZNF428Q96B54 188 aa9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 BRMS1Q9HCU9 246 aa9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 PLIN1O60240 522 aa9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 CCDC94Q9BW85 323 aaPredicted RBP9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 PLEKHH1Q9ULM0 1364 aa9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 RNF214Q8ND24 703 aa9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 CLUAP1Q96AJ1 413 aa9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 PPM1FP49593 454 aaPredicted RBP9.92□□□□□ -0.82
PPARGC1B-201ENST00000309241 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms