RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 CGNL1Q0VF96 1302 aa23.92■■□□□ 1.42
RAPH1-201ENST00000308091 SEC24BO95487 1268 aa23.92■■□□□ 1.42
RAPH1-201ENST00000308091 PDE3AQ14432 1141 aa23.92■■□□□ 1.42
RAPH1-201ENST00000308091 NUTM2DQ5VT03 806 aaPredicted RBP23.92■■□□□ 1.42
RAPH1-201ENST00000308091 TCP11L2Q8N4U5 519 aa23.92■■□□□ 1.42
RAPH1-201ENST00000308091 ABCA9Q8IUA7 1624 aa23.92■■□□□ 1.42
RAPH1-201ENST00000308091 KIF1BO60333 1816 aa23.91■■□□□ 1.42
RAPH1-201ENST00000308091 FAM43AQ8N2R8 423 aa23.91■■□□□ 1.42
RAPH1-201ENST00000308091 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
RAPH1-201ENST00000308091 EFCAB6Q5THR3 1501 aa23.91■■□□□ 1.42
RAPH1-201ENST00000308091 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
RAPH1-201ENST00000308091 PPRC1Q5VV67 1664 aaKnown RBP23.9■■□□□ 1.42
RAPH1-201ENST00000308091 GGT6Q6P531 493 aa23.89■■□□□ 1.42
RAPH1-201ENST00000308091 RLBP1P12271 317 aa23.89■■□□□ 1.41
RAPH1-201ENST00000308091 MTHFSP49914 203 aa23.89■■□□□ 1.41
RAPH1-201ENST00000308091 RRAGDQ9NQL2 400 aaPredicted RBP23.89■■□□□ 1.41
RAPH1-201ENST00000308091 USP19O94966 1318 aa23.88■■□□□ 1.41
RAPH1-201ENST00000308091 RARSP54136 660 aaKnown RBP23.88■■□□□ 1.41
RAPH1-201ENST00000308091 RUNDC1Q96C34 613 aa23.88■■□□□ 1.41
RAPH1-201ENST00000308091 NGEFQ8N5V2 710 aa23.87■■□□□ 1.41
RAPH1-201ENST00000308091 SBNO2Q9Y2G9 1366 aa23.87■■□□□ 1.41
RAPH1-201ENST00000308091 NRXN1Q9ULB1 1477 aa23.87■■□□□ 1.41
RAPH1-201ENST00000308091 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
RAPH1-201ENST00000308091 IFT172Q9UG01 1749 aa23.86■■□□□ 1.41
RAPH1-201ENST00000308091 PKNOX2Q96KN3 472 aa23.85■■□□□ 1.41
RAPH1-201ENST00000308091 SLKQ9H2G2 1235 aaPredicted RBP23.85■■□□□ 1.41
RAPH1-201ENST00000308091 PCDHB15Q9Y5E8 787 aa23.85■■□□□ 1.41
RAPH1-201ENST00000308091 C14orf93Q9H972 538 aaKnown RBP23.84■■□□□ 1.41
RAPH1-201ENST00000308091 SHPRHQ149N8 1683 aa23.83■■□□□ 1.41
RAPH1-201ENST00000308091 KIDINS220Q9ULH0 1771 aa23.82■■□□□ 1.4
RAPH1-201ENST00000308091 ASXL2Q76L83 1435 aa23.82■■□□□ 1.4
RAPH1-201ENST00000308091 SAFB2Q14151 953 aaKnown RBP eCLIP23.82■■□□□ 1.4
RAPH1-201ENST00000308091 MYO3AQ8NEV4 1616 aa23.82■■□□□ 1.4
RAPH1-201ENST00000308091 NPATQ14207 1427 aa23.81■■□□□ 1.4
RAPH1-201ENST00000308091 ADGRB3O60242 1522 aa23.81■■□□□ 1.4
RAPH1-201ENST00000308091 MAPK8IP3Q9UPT6 1336 aa23.8■■□□□ 1.4
RAPH1-201ENST00000308091 PHF23Q9BUL5 403 aaPredicted RBP23.79■■□□□ 1.4
RAPH1-201ENST00000308091 U2AF1L5P0DN76 240 aaPredicted RBP23.79■■□□□ 1.4
RAPH1-201ENST00000308091 U2AF1Q01081 240 aaKnown RBP eCLIP23.79■■□□□ 1.4
RAPH1-201ENST00000308091 NINLQ9Y2I6 1382 aa23.79■■□□□ 1.4
RAPH1-201ENST00000308091 IQSEC2Q5JU85 1478 aa23.79■■□□□ 1.4
RAPH1-201ENST00000308091 QRICH2Q9H0J4 1663 aa23.78■■□□□ 1.4
RAPH1-201ENST00000308091 CABP2Q9NPB3 220 aa23.77■■□□□ 1.4
RAPH1-201ENST00000308091 ADGRB1O14514 1584 aa23.76■■□□□ 1.39
RAPH1-201ENST00000308091 ZNF518AQ6AHZ1 1483 aa23.76■■□□□ 1.39
RAPH1-201ENST00000308091 CFAP53Q96M91 514 aa23.76■■□□□ 1.39
RAPH1-201ENST00000308091 WDR63Q8IWG1 891 aa23.75■■□□□ 1.39
RAPH1-201ENST00000308091 VSIG10Q8N0Z9 540 aa23.75■■□□□ 1.39
RAPH1-201ENST00000308091 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
RAPH1-201ENST00000308091 PDZRN3Q9UPQ7 1066 aa23.75■■□□□ 1.39
RAPH1-201ENST00000308091 TSR2Q969E8 191 aaKnown RBP23.74■■□□□ 1.39
RAPH1-201ENST00000308091 NAP1L5Q96NT1 182 aaPredicted RBP23.74■■□□□ 1.39
RAPH1-201ENST00000308091 LMTK2Q8IWU2 1503 aa23.73■■□□□ 1.39
RAPH1-201ENST00000308091 PMFBP1Q8TBY8 1022 aa23.73■■□□□ 1.39
RAPH1-201ENST00000308091 GZF1Q9H116 711 aaPredicted RBP23.71■■□□□ 1.39
RAPH1-201ENST00000308091 ZC3H13Q5T200 1668 aaKnown RBP23.71■■□□□ 1.39
RAPH1-201ENST00000308091 SPRYD3Q8NCJ5 442 aa23.71■■□□□ 1.39
RAPH1-201ENST00000308091 PPLO60437 1756 aa23.7■■□□□ 1.39
RAPH1-201ENST00000308091 STK26Q9P289 416 aa23.7■■□□□ 1.38
RAPH1-201ENST00000308091 VIRMAQ69YN4 1812 aaKnown RBP23.7■■□□□ 1.38
RAPH1-201ENST00000308091 NLRP1Q9C000 1473 aa23.69■■□□□ 1.38
RAPH1-201ENST00000308091 EVC2Q86UK5 1308 aa23.69■■□□□ 1.38
RAPH1-201ENST00000308091 U2SURPO15042 1029 aaKnown RBP23.69■■□□□ 1.38
RAPH1-201ENST00000308091 MYH16Q9H6N6 1097 aa23.69■■□□□ 1.38
RAPH1-201ENST00000308091 CCDC27Q2M243 656 aa23.68■■□□□ 1.38
RAPH1-201ENST00000308091 GGNBP2Q9H3C7 697 aa23.68■■□□□ 1.38
RAPH1-201ENST00000308091 FRMPD1Q5SYB0 1578 aa23.67■■□□□ 1.38
RAPH1-201ENST00000308091 TULP4Q9NRJ4 1543 aa23.67■■□□□ 1.38
RAPH1-201ENST00000308091 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
RAPH1-201ENST00000308091 MVPQ14764 893 aaKnown RBP23.66■■□□□ 1.38
RAPH1-201ENST00000308091 FTSJ3Q8IY81 847 aaKnown RBP23.66■■□□□ 1.38
RAPH1-201ENST00000308091 PANK2Q9BZ23 570 aa23.66■■□□□ 1.38
RAPH1-201ENST00000308091 RWDD1Q9H446 243 aaPredicted RBP23.65■■□□□ 1.38
RAPH1-201ENST00000308091 BECN1Q14457 450 aa23.65■■□□□ 1.38
RAPH1-201ENST00000308091 ZMYND15Q9H091 742 aa23.65■■□□□ 1.38
RAPH1-201ENST00000308091 GLI2P10070 1586 aa23.64■■□□□ 1.38
RAPH1-201ENST00000308091 EXOSC9Q06265 439 aaKnown RBP23.64■■□□□ 1.37
RAPH1-201ENST00000308091 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.37
RAPH1-201ENST00000308091 RAPGEF3O95398 923 aa23.63■■□□□ 1.37
RAPH1-201ENST00000308091 ZKSCAN2Q63HK3 967 aa23.63■■□□□ 1.37
RAPH1-201ENST00000308091 SMC4Q9NTJ3 1288 aa23.63■■□□□ 1.37
RAPH1-201ENST00000308091 SRPK2P78362 688 aaKnown RBP23.63■■□□□ 1.37
RAPH1-201ENST00000308091 DZIP1LQ8IYY4 767 aaKnown RBP23.63■■□□□ 1.37
RAPH1-201ENST00000308091 POGZQ7Z3K3 1410 aa23.63■■□□□ 1.37
RAPH1-201ENST00000308091 TBC1D32Q96NH3 1257 aa23.62■■□□□ 1.37
RAPH1-201ENST00000308091 UPF2Q9HAU5 1272 aaKnown RBP23.62■■□□□ 1.37
RAPH1-201ENST00000308091 CD109Q6YHK3 1445 aa23.61■■□□□ 1.37
RAPH1-201ENST00000308091 VGFO15240 615 aaPredicted RBP23.61■■□□□ 1.37
RAPH1-201ENST00000308091 A0A1W2PP64 1363 aa23.61■■□□□ 1.37
RAPH1-201ENST00000308091 ABCC3O15438 1527 aa23.61■■□□□ 1.37
RAPH1-201ENST00000308091 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
RAPH1-201ENST00000308091 USP32Q8NFA0 1604 aa23.6■■□□□ 1.37
RAPH1-201ENST00000308091 TRIM27P14373 513 aa23.6■■□□□ 1.37
RAPH1-201ENST00000308091 TBC1D2Q9BYX2 928 aa23.6■■□□□ 1.37
RAPH1-201ENST00000308091 TMPOP42166 694 aaKnown RBP23.59■■□□□ 1.37
RAPH1-201ENST00000308091 AAMPQ13685 434 aa23.59■■□□□ 1.37
RAPH1-201ENST00000308091 SSH1Q8WYL5 1049 aa23.59■■□□□ 1.37
RAPH1-201ENST00000308091 TRIM35Q9UPQ4 493 aa23.59■■□□□ 1.37
RAPH1-201ENST00000308091 IDI1Q13907 227 aa23.58■■□□□ 1.37
RAPH1-201ENST00000308091 ITPRIPQ8IWB1 547 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms