RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 ATP10AO60312 1499 aa23.7■■□□□ 1.38
CHRNB1-201ENST00000306071 MADDQ8WXG6 1647 aa23.7■■□□□ 1.38
CHRNB1-201ENST00000306071 TCP11L2Q8N4U5 519 aa23.69■■□□□ 1.38
CHRNB1-201ENST00000306071 NCOA3Q9Y6Q9 1424 aa23.69■■□□□ 1.38
CHRNB1-201ENST00000306071 RUNDC1Q96C34 613 aa23.69■■□□□ 1.38
CHRNB1-201ENST00000306071 CCDC173Q0VFZ6 552 aa23.68■■□□□ 1.38
CHRNB1-201ENST00000306071 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
CHRNB1-201ENST00000306071 KDM5AP29375 1690 aaKnown RBP23.68■■□□□ 1.38
CHRNB1-201ENST00000306071 JPH4Q96JJ6 628 aa23.67■■□□□ 1.38
CHRNB1-201ENST00000306071 POLR3AO14802 1390 aaPredicted RBP23.67■■□□□ 1.38
CHRNB1-201ENST00000306071 ANP32BQ92688 251 aaKnown RBP23.67■■□□□ 1.38
CHRNB1-201ENST00000306071 CARD14Q9BXL6 1004 aa23.67■■□□□ 1.38
CHRNB1-201ENST00000306071 CIZ1Q9ULV3 898 aaPredicted RBP23.67■■□□□ 1.38
CHRNB1-201ENST00000306071 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
CHRNB1-201ENST00000306071 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
CHRNB1-201ENST00000306071 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
CHRNB1-201ENST00000306071 PTMSP20962 102 aa23.66■■□□□ 1.38
CHRNB1-201ENST00000306071 FBLN2P98095 1184 aa23.66■■□□□ 1.38
CHRNB1-201ENST00000306071 SMC5Q8IY18 1101 aa23.66■■□□□ 1.38
CHRNB1-201ENST00000306071 MRC2Q9UBG0 1479 aa23.66■■□□□ 1.38
CHRNB1-201ENST00000306071 ZKSCAN2Q63HK3 967 aa23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 DZIP1LQ8IYY4 767 aaKnown RBP23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 SNX21Q969T3 373 aa23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 SCAPERQ9BY12 1400 aa23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 NASPP49321 788 aaPredicted RBP23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 ZSCAN30Q86W11 494 aa23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 SYCP2Q9BX26 1530 aa23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 CDC42BPBQ9Y5S2 1711 aa23.65■■□□□ 1.38
CHRNB1-201ENST00000306071 TNNT2P45379 298 aaPredicted RBP23.64■■□□□ 1.38
CHRNB1-201ENST00000306071 RAB3GAP1Q15042 981 aa23.64■■□□□ 1.38
CHRNB1-201ENST00000306071 MSNP26038 577 aaKnown RBP23.63■■□□□ 1.37
CHRNB1-201ENST00000306071 RBM25P49756 843 aaKnown RBP23.62■■□□□ 1.37
CHRNB1-201ENST00000306071 FOXD4L1Q9NU39 408 aa23.62■■□□□ 1.37
CHRNB1-201ENST00000306071 OFD1O75665 1012 aa23.61■■□□□ 1.37
CHRNB1-201ENST00000306071 PPP1R9BQ96SB3 815 aa23.61■■□□□ 1.37
CHRNB1-201ENST00000306071 PREX2Q70Z35 1606 aa23.61■■□□□ 1.37
CHRNB1-201ENST00000306071 RBM10P98175 930 aaKnown RBP23.61■■□□□ 1.37
CHRNB1-201ENST00000306071 CEP152O94986 1710 aa23.61■■□□□ 1.37
CHRNB1-201ENST00000306071 HDAC1Q13547 482 aaPredicted RBP23.6■■□□□ 1.37
CHRNB1-201ENST00000306071 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.6■■□□□ 1.37
CHRNB1-201ENST00000306071 MAST1Q9Y2H9 1570 aa23.6■■□□□ 1.37
CHRNB1-201ENST00000306071 PHF23Q9BUL5 403 aaPredicted RBP23.59■■□□□ 1.37
CHRNB1-201ENST00000306071 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
CHRNB1-201ENST00000306071 ITPRIPQ8IWB1 547 aa23.59■■□□□ 1.37
CHRNB1-201ENST00000306071 GOLGA6L22H0YM25 854 aa23.58■■□□□ 1.37
CHRNB1-201ENST00000306071 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
CHRNB1-201ENST00000306071 TTC37Q6PGP7 1564 aa23.56■■□□□ 1.36
CHRNB1-201ENST00000306071 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
CHRNB1-201ENST00000306071 SMC4Q9NTJ3 1288 aa23.56■■□□□ 1.36
CHRNB1-201ENST00000306071 SHPRHQ149N8 1683 aa23.55■■□□□ 1.36
CHRNB1-201ENST00000306071 SPHKAPQ2M3C7 1700 aa23.55■■□□□ 1.36
CHRNB1-201ENST00000306071 SLC24A1O60721 1099 aa23.55■■□□□ 1.36
CHRNB1-201ENST00000306071 DDX19BQ9UMR2 479 aa23.55■■□□□ 1.36
CHRNB1-201ENST00000306071 DDX49Q9Y6V7 483 aaKnown RBP23.55■■□□□ 1.36
CHRNB1-201ENST00000306071 ARHGAP5Q13017 1502 aa23.55■■□□□ 1.36
CHRNB1-201ENST00000306071 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
CHRNB1-201ENST00000306071 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
CHRNB1-201ENST00000306071 FAM13BQ9NYF5 915 aa23.54■■□□□ 1.36
CHRNB1-201ENST00000306071 ERVK-7P63135 1459 aa23.54■■□□□ 1.36
CHRNB1-201ENST00000306071 RIPK4P57078 832 aa23.54■■□□□ 1.36
CHRNB1-201ENST00000306071 CCDC27Q2M243 656 aa23.53■■□□□ 1.36
CHRNB1-201ENST00000306071 TRIM27P14373 513 aa23.53■■□□□ 1.36
CHRNB1-201ENST00000306071 SSFA2P28290 1259 aa23.52■■□□□ 1.36
CHRNB1-201ENST00000306071 R3HCC1Q9Y3T6 440 aaKnown RBP23.52■■□□□ 1.36
CHRNB1-201ENST00000306071 KANK1Q14678 1352 aa23.52■■□□□ 1.36
CHRNB1-201ENST00000306071 TERF1P54274 439 aa23.51■■□□□ 1.35
CHRNB1-201ENST00000306071 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
CHRNB1-201ENST00000306071 LNPKQ9C0E8 428 aa23.51■■□□□ 1.35
CHRNB1-201ENST00000306071 K7ELQ4 463 aaPredicted RBP23.5■■□□□ 1.35
CHRNB1-201ENST00000306071 CD2BP2O95400 341 aaKnown RBP23.5■■□□□ 1.35
CHRNB1-201ENST00000306071 KLHL40Q2TBA0 621 aa23.5■■□□□ 1.35
CHRNB1-201ENST00000306071 MAP7D2Q96T17 732 aa23.49■■□□□ 1.35
CHRNB1-201ENST00000306071 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
CHRNB1-201ENST00000306071 NUCB1Q02818 461 aa23.48■■□□□ 1.35
CHRNB1-201ENST00000306071 CFAP70Q5T0N1 1121 aa23.48■■□□□ 1.35
CHRNB1-201ENST00000306071 CFAP53Q96M91 514 aa23.48■■□□□ 1.35
CHRNB1-201ENST00000306071 KIF2CQ99661 725 aa23.48■■□□□ 1.35
CHRNB1-201ENST00000306071 NSD3Q9BZ95 1437 aa23.48■■□□□ 1.35
CHRNB1-201ENST00000306071 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
CHRNB1-201ENST00000306071 MTHFSP49914 203 aa23.47■■□□□ 1.35
CHRNB1-201ENST00000306071 ATF7IPQ6VMQ6 1270 aa23.47■■□□□ 1.35
CHRNB1-201ENST00000306071 CT47B1P0C2W7 299 aaPredicted RBP23.47■■□□□ 1.35
CHRNB1-201ENST00000306071 NCLP19338 710 aaKnown RBP23.47■■□□□ 1.35
CHRNB1-201ENST00000306071 EXOSC9Q06265 439 aaKnown RBP23.47■■□□□ 1.35
CHRNB1-201ENST00000306071 SSH1Q8WYL5 1049 aa23.46■■□□□ 1.35
CHRNB1-201ENST00000306071 BAG4O95429 457 aaKnown RBP23.46■■□□□ 1.35
CHRNB1-201ENST00000306071 TMEM57Q8N5G2 664 aa23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 GAS2L2Q8NHY3 880 aa23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 RBM42Q9BTD8 480 aaKnown RBP23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 PRDM4Q9UKN5 801 aa23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 U2AF1L5P0DN76 240 aaPredicted RBP23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 U2AF1Q01081 240 aaKnown RBP eCLIP23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 CHD1LQ86WJ1 897 aa23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.34
CHRNB1-201ENST00000306071 TRPM2O94759 1503 aa23.44■■□□□ 1.34
CHRNB1-201ENST00000306071 HS1BP3Q53T59 392 aa23.44■■□□□ 1.34
CHRNB1-201ENST00000306071 ZBTB40Q9NUA8 1239 aa23.44■■□□□ 1.34
CHRNB1-201ENST00000306071 BMP2KLQ5H9B9 411 aa23.43■■□□□ 1.34
CHRNB1-201ENST00000306071 UQCRHLA0A096LP55 91 aa23.43■■□□□ 1.34
CHRNB1-201ENST00000306071 UQCRHP07919 91 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms