RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
PRPF8-201ENST00000304992 CCDC43Q96MW1 224 aaKnown RBP12.39□□□□□ -0.43
PRPF8-201ENST00000304992 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
PRPF8-201ENST00000304992 PHF14O94880 888 aa12.38□□□□□ -0.43
PRPF8-201ENST00000304992 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-201ENST00000304992 IKQ13123 557 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-201ENST00000304992 UBTFL1P0CB47 393 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-201ENST00000304992 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
PRPF8-201ENST00000304992 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
PRPF8-201ENST00000304992 NESP48681 1621 aa12.37□□□□□ -0.43
PRPF8-201ENST00000304992 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
PRPF8-201ENST00000304992 BECN2A8MW95 431 aa12.37□□□□□ -0.43
PRPF8-201ENST00000304992 REC8O95072 547 aa12.37□□□□□ -0.43
PRPF8-201ENST00000304992 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
PRPF8-201ENST00000304992 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
PRPF8-201ENST00000304992 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
PRPF8-201ENST00000304992 ROCK1Q13464 1354 aa12.37□□□□□ -0.43
PRPF8-201ENST00000304992 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
PRPF8-201ENST00000304992 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
PRPF8-201ENST00000304992 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
PRPF8-201ENST00000304992 SCAPERQ9BY12 1400 aa12.36□□□□□ -0.43
PRPF8-201ENST00000304992 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
PRPF8-201ENST00000304992 TPM2P07951 284 aa12.36□□□□□ -0.43
PRPF8-201ENST00000304992 PLEKHO1Q53GL0 409 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-201ENST00000304992 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
PRPF8-201ENST00000304992 KIF7Q2M1P5 1343 aa12.35□□□□□ -0.43
PRPF8-201ENST00000304992 VPS37CA5D8V6 355 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-201ENST00000304992 PDE4AP27815 886 aa12.35□□□□□ -0.43
PRPF8-201ENST00000304992 ATP6V1DQ9Y5K8 247 aa12.35□□□□□ -0.43
PRPF8-201ENST00000304992 TATP17735 454 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-201ENST00000304992 CUX1P39880 1505 aa12.35□□□□□ -0.43
PRPF8-201ENST00000304992 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
PRPF8-201ENST00000304992 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
PRPF8-201ENST00000304992 CCAR2Q8N163 923 aaKnown RBP12.35□□□□□ -0.43
PRPF8-201ENST00000304992 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
PRPF8-201ENST00000304992 ERC2O15083 957 aa12.34□□□□□ -0.43
PRPF8-201ENST00000304992 CDK19Q9BWU1 502 aa12.34□□□□□ -0.43
PRPF8-201ENST00000304992 ZBED9Q6R2W3 1325 aa12.34□□□□□ -0.43
PRPF8-201ENST00000304992 DNAJC2Q99543 621 aaKnown RBP12.34□□□□□ -0.43
PRPF8-201ENST00000304992 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
PRPF8-201ENST00000304992 CABP4P57796 275 aa12.33□□□□□ -0.44
PRPF8-201ENST00000304992 HSP90AB4PQ58FF6 505 aa12.33□□□□□ -0.44
PRPF8-201ENST00000304992 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
PRPF8-201ENST00000304992 CABP1Q9NZU7 370 aa12.33□□□□□ -0.44
PRPF8-201ENST00000304992 ANKLE2Q86XL3 938 aa12.33□□□□□ -0.44
PRPF8-201ENST00000304992 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
PRPF8-201ENST00000304992 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
PRPF8-201ENST00000304992 STK11IPQ8N1F8 1099 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 SMG6Q86US8 1419 aaKnown RBP12.32□□□□□ -0.44
PRPF8-201ENST00000304992 NBPF1Q3BBV0 1214 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 ADAMTS8Q9UP79 889 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 SULT6B1Q6IMI4 303 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 MYL6BP14649 208 aa12.32□□□□□ -0.44
PRPF8-201ENST00000304992 CCDC47Q96A33 483 aaKnown RBP12.32□□□□□ -0.44
PRPF8-201ENST00000304992 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
PRPF8-201ENST00000304992 TPM1P09493 284 aa12.31□□□□□ -0.44
PRPF8-201ENST00000304992 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
PRPF8-201ENST00000304992 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
PRPF8-201ENST00000304992 FSD1Q9BTV5 496 aa12.31□□□□□ -0.44
PRPF8-201ENST00000304992 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
PRPF8-201ENST00000304992 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
PRPF8-201ENST00000304992 TCP11L2Q8N4U5 519 aa12.31□□□□□ -0.44
PRPF8-201ENST00000304992 GOLGA6L1Q8N7Z2 621 aa12.31□□□□□ -0.44
PRPF8-201ENST00000304992 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
PRPF8-201ENST00000304992 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
PRPF8-201ENST00000304992 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
PRPF8-201ENST00000304992 ZC3H6P61129 1189 aaKnown RBP12.3□□□□□ -0.44
PRPF8-201ENST00000304992 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
PRPF8-201ENST00000304992 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
PRPF8-201ENST00000304992 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
PRPF8-201ENST00000304992 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
PRPF8-201ENST00000304992 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
PRPF8-201ENST00000304992 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
PRPF8-201ENST00000304992 SAFBQ15424 915 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF8-201ENST00000304992 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
PRPF8-201ENST00000304992 WASHC2AQ641Q2 1341 aa12.29□□□□□ -0.44
PRPF8-201ENST00000304992 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
PRPF8-201ENST00000304992 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
PRPF8-201ENST00000304992 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
PRPF8-201ENST00000304992 SIL1Q9H173 461 aa12.29□□□□□ -0.44
PRPF8-201ENST00000304992 CFTRP13569 1480 aa12.28□□□□□ -0.44
PRPF8-201ENST00000304992 CLASRPQ8N2M8 674 aaKnown RBP12.28□□□□□ -0.44
PRPF8-201ENST00000304992 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
PRPF8-201ENST00000304992 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
PRPF8-201ENST00000304992 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
PRPF8-201ENST00000304992 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.44
PRPF8-201ENST00000304992 TSR2Q969E8 191 aaKnown RBP12.27□□□□□ -0.44
PRPF8-201ENST00000304992 RBM5P52756 815 aaKnown RBP eCLIP12.27□□□□□ -0.45
PRPF8-201ENST00000304992 EXOSC9Q06265 439 aaKnown RBP12.27□□□□□ -0.45
PRPF8-201ENST00000304992 CNTLNQ9NXG0 1405 aa12.27□□□□□ -0.45
PRPF8-201ENST00000304992 ZNF592Q92610 1267 aa12.27□□□□□ -0.45
PRPF8-201ENST00000304992 TWISTNBQ3B726 338 aaPredicted RBP12.26□□□□□ -0.45
PRPF8-201ENST00000304992 ANKRD20A12PQ8NF67 263 aa12.26□□□□□ -0.45
PRPF8-201ENST00000304992 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
PRPF8-201ENST00000304992 NCAPD3P42695 1498 aa12.26□□□□□ -0.45
PRPF8-201ENST00000304992 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
PRPF8-201ENST00000304992 TTC39AQ5SRH9 613 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms