RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 CPS1P31327 1500 aa25.42■■□□□ 1.66
HOXC10-201ENST00000303460 PUS7Q96PZ0 661 aaKnown RBP25.41■■□□□ 1.66
HOXC10-201ENST00000303460 KTN1Q86UP2 1357 aaKnown RBP25.4■■□□□ 1.66
HOXC10-201ENST00000303460 CABP2Q9NPB3 220 aa25.4■■□□□ 1.66
HOXC10-201ENST00000303460 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
HOXC10-201ENST00000303460 FAM135BQ49AJ0 1406 aa25.38■■□□□ 1.65
HOXC10-201ENST00000303460 PTPRUQ92729 1446 aa25.38■■□□□ 1.65
HOXC10-201ENST00000303460 RALBP1Q15311 655 aa25.38■■□□□ 1.65
HOXC10-201ENST00000303460 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
HOXC10-201ENST00000303460 CC2D1BQ5T0F9 858 aaKnown RBP25.37■■□□□ 1.65
HOXC10-201ENST00000303460 SLC12A5Q9H2X9 1139 aa25.37■■□□□ 1.65
HOXC10-201ENST00000303460 KNSTRNQ9Y448 316 aa25.37■■□□□ 1.65
HOXC10-201ENST00000303460 TBX22Q9Y458 520 aa25.37■■□□□ 1.65
HOXC10-201ENST00000303460 SIRT1Q96EB6 747 aa25.37■■□□□ 1.65
HOXC10-201ENST00000303460 MRS2Q9HD23 443 aa25.37■■□□□ 1.65
HOXC10-201ENST00000303460 TMC1Q8TDI8 760 aa25.36■■□□□ 1.65
HOXC10-201ENST00000303460 CARD14Q9BXL6 1004 aa25.36■■□□□ 1.65
HOXC10-201ENST00000303460 ROBO2Q9HCK4 1378 aa25.36■■□□□ 1.65
HOXC10-201ENST00000303460 AMER1Q5JTC6 1135 aaPredicted RBP25.35■■□□□ 1.65
HOXC10-201ENST00000303460 SRPK2P78362 688 aaKnown RBP25.35■■□□□ 1.65
HOXC10-201ENST00000303460 MYBBP1AQ9BQG0 1328 aaKnown RBP25.34■■□□□ 1.65
HOXC10-201ENST00000303460 ANKLE2Q86XL3 938 aa25.33■■□□□ 1.65
HOXC10-201ENST00000303460 CDK19Q9BWU1 502 aa25.33■■□□□ 1.65
HOXC10-201ENST00000303460 ATAD2Q6PL18 1390 aa25.29■■□□□ 1.64
HOXC10-201ENST00000303460 NPC1L1Q9UHC9 1359 aa25.29■■□□□ 1.64
HOXC10-201ENST00000303460 AMOTL2Q9Y2J4 779 aa25.29■■□□□ 1.64
HOXC10-201ENST00000303460 XRN1Q8IZH2 1706 aaKnown RBP25.27■■□□□ 1.64
HOXC10-201ENST00000303460 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.27■■□□□ 1.64
HOXC10-201ENST00000303460 NSD3Q9BZ95 1437 aa25.27■■□□□ 1.64
HOXC10-201ENST00000303460 SUPT16HQ9Y5B9 1047 aaKnown RBP25.26■■□□□ 1.63
HOXC10-201ENST00000303460 BRD4O60885 1362 aaPredicted RBP25.26■■□□□ 1.63
HOXC10-201ENST00000303460 ANKRD36BQ8N2N9 1353 aa25.26■■□□□ 1.63
HOXC10-201ENST00000303460 NINLQ9Y2I6 1382 aa25.26■■□□□ 1.63
HOXC10-201ENST00000303460 WASLO00401 505 aaPredicted RBP25.25■■□□□ 1.63
HOXC10-201ENST00000303460 KDM4FA0A1W2PPD8 638 aa25.24■■□□□ 1.63
HOXC10-201ENST00000303460 PTCH1Q13635 1447 aa25.24■■□□□ 1.63
HOXC10-201ENST00000303460 NLRP13Q86W25 1043 aa25.24■■□□□ 1.63
HOXC10-201ENST00000303460 FAM9BQ8IZU0 186 aa25.24■■□□□ 1.63
HOXC10-201ENST00000303460 CD163L1Q9NR16 1453 aa25.23■■□□□ 1.63
HOXC10-201ENST00000303460 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
HOXC10-201ENST00000303460 ADGRB2O60241 1585 aa25.23■■□□□ 1.63
HOXC10-201ENST00000303460 USP32Q8NFA0 1604 aa25.22■■□□□ 1.63
HOXC10-201ENST00000303460 A0A1W2PP64 1363 aa25.22■■□□□ 1.63
HOXC10-201ENST00000303460 NPHP4O75161 1426 aaPredicted RBP25.21■■□□□ 1.63
HOXC10-201ENST00000303460 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
HOXC10-201ENST00000303460 CABP1Q9NZU7 370 aa25.19■■□□□ 1.62
HOXC10-201ENST00000303460 NCKAP5LQ9HCH0 1330 aa25.19■■□□□ 1.62
HOXC10-201ENST00000303460 CHD2O14647 1828 aaKnown RBP25.19■■□□□ 1.62
HOXC10-201ENST00000303460 KCNA6P17658 529 aa25.18■■□□□ 1.62
HOXC10-201ENST00000303460 PPP2R1AP30153 589 aa25.17■■□□□ 1.62
HOXC10-201ENST00000303460 NEFLP07196 543 aa25.16■■□□□ 1.62
HOXC10-201ENST00000303460 HNRNPUQ00839 825 aaKnown RBP eCLIP25.16■■□□□ 1.62
HOXC10-201ENST00000303460 TERF2IPQ9NYB0 399 aa25.15■■□□□ 1.62
HOXC10-201ENST00000303460 NUDT16Q96DE0 195 aaKnown RBP25.14■■□□□ 1.62
HOXC10-201ENST00000303460 ATP7BP35670 1465 aa25.14■■□□□ 1.62
HOXC10-201ENST00000303460 PRR36Q9H6K5 1346 aa25.14■■□□□ 1.61
HOXC10-201ENST00000303460 PPIP5K1Q6PFW1 1433 aa25.13■■□□□ 1.61
HOXC10-201ENST00000303460 CGNL1Q0VF96 1302 aa25.13■■□□□ 1.61
HOXC10-201ENST00000303460 HDGFL2Q7Z4V5 671 aaPredicted RBP25.1■■□□□ 1.61
HOXC10-201ENST00000303460 CCDC61Q9Y6R9 512 aa25.09■■□□□ 1.61
HOXC10-201ENST00000303460 TOPAZ1Q8N9V7 1692 aa25.08■■□□□ 1.61
HOXC10-201ENST00000303460 CPSF1Q10570 1443 aaKnown RBP25.08■■□□□ 1.61
HOXC10-201ENST00000303460 CDC42BPGQ6DT37 1551 aa25.08■■□□□ 1.6
HOXC10-201ENST00000303460 NSD2O96028 1365 aa25.08■■□□□ 1.6
HOXC10-201ENST00000303460 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
HOXC10-201ENST00000303460 NUTM2FA1L443 756 aa25.06■■□□□ 1.6
HOXC10-201ENST00000303460 HSPA2P54652 639 aa25.06■■□□□ 1.6
HOXC10-201ENST00000303460 LMTK3Q96Q04 1460 aa25.04■■□□□ 1.6
HOXC10-201ENST00000303460 AKAP12Q02952 1782 aa25.03■■□□□ 1.6
HOXC10-201ENST00000303460 NALCNQ8IZF0 1738 aa25.03■■□□□ 1.6
HOXC10-201ENST00000303460 FYB1O15117 783 aa25.03■■□□□ 1.6
HOXC10-201ENST00000303460 NWD1Q149M9 1564 aa25.03■■□□□ 1.6
HOXC10-201ENST00000303460 ANKRD26Q9UPS8 1709 aa25.03■■□□□ 1.6
HOXC10-201ENST00000303460 KIF20BQ96Q89 1820 aa25.02■■□□□ 1.6
HOXC10-201ENST00000303460 ITSN1Q15811 1721 aa25.02■■□□□ 1.6
HOXC10-201ENST00000303460 MON2Q7Z3U7 1717 aa25.02■■□□□ 1.6
HOXC10-201ENST00000303460 TNNT2P45379 298 aaPredicted RBP25.02■■□□□ 1.6
HOXC10-201ENST00000303460 FKBP8Q14318 412 aa25.02■■□□□ 1.6
HOXC10-201ENST00000303460 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
HOXC10-201ENST00000303460 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
HOXC10-201ENST00000303460 NKTRP30414 1462 aaKnown RBP25.01■■□□□ 1.59
HOXC10-201ENST00000303460 RGPD8O14715 1765 aaPredicted RBP25■■□□□ 1.59
HOXC10-201ENST00000303460 FMN2Q9NZ56 1722 aa25■■□□□ 1.59
HOXC10-201ENST00000303460 EDC4Q6P2E9 1401 aaKnown RBP24.99■■□□□ 1.59
HOXC10-201ENST00000303460 ZBED9Q6R2W3 1325 aa24.98■■□□□ 1.59
HOXC10-201ENST00000303460 PLEKHG3A1L390 1219 aa24.98■■□□□ 1.59
HOXC10-201ENST00000303460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.98■■□□□ 1.59
HOXC10-201ENST00000303460 ACEP12821 1306 aa24.95■■□□□ 1.58
HOXC10-201ENST00000303460 ANKARQ7Z5J8 1434 aa24.94■■□□□ 1.58
HOXC10-201ENST00000303460 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
HOXC10-201ENST00000303460 ZNF692Q9BU19 519 aaPredicted RBP24.94■■□□□ 1.58
HOXC10-201ENST00000303460 POLR3AO14802 1390 aaPredicted RBP24.94■■□□□ 1.58
HOXC10-201ENST00000303460 NRKQ7Z2Y5 1582 aa24.93■■□□□ 1.58
HOXC10-201ENST00000303460 SENP3-EIF4A1A0A087X0R7 540 aa24.93■■□□□ 1.58
HOXC10-201ENST00000303460 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
HOXC10-201ENST00000303460 ADAMTS8Q9UP79 889 aa24.92■■□□□ 1.58
HOXC10-201ENST00000303460 STRCP1A6NGW2 1772 aa24.92■■□□□ 1.58
HOXC10-201ENST00000303460 BLMP54132 1417 aaPredicted RBP24.91■■□□□ 1.58
HOXC10-201ENST00000303460 INSRP06213 1382 aa24.91■■□□□ 1.58
HOXC10-201ENST00000303460 MTHFSP49914 203 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms