RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
GCN1-201ENST00000300648 CLUAP1Q96AJ1 413 aa13.56□□□□□ -0.24
GCN1-201ENST00000300648 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
GCN1-201ENST00000300648 PRKRIP1Q9H875 184 aaPredicted RBP13.56□□□□□ -0.24
GCN1-201ENST00000300648 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
GCN1-201ENST00000300648 C22orf23Q9BZE7 217 aa13.55□□□□□ -0.24
GCN1-201ENST00000300648 KINO60870 393 aaKnown RBP13.55□□□□□ -0.24
GCN1-201ENST00000300648 CCDC43Q96MW1 224 aaKnown RBP13.55□□□□□ -0.24
GCN1-201ENST00000300648 JMYQ8N9B5 988 aa13.55□□□□□ -0.24
GCN1-201ENST00000300648 KIF2AO00139 706 aaPredicted RBP13.55□□□□□ -0.24
GCN1-201ENST00000300648 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
GCN1-201ENST00000300648 C9orf78Q9NZ63 289 aaPredicted RBP13.55□□□□□ -0.24
GCN1-201ENST00000300648 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 SOX12O15370 315 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 SENP3Q9H4L4 574 aaPredicted RBP13.54□□□□□ -0.24
GCN1-201ENST00000300648 CDC45O75419 566 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
GCN1-201ENST00000300648 KIF3BO15066 747 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 OFD1O75665 1012 aa13.54□□□□□ -0.24
GCN1-201ENST00000300648 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
GCN1-201ENST00000300648 PTPRGP23470 1445 aa13.53□□□□□ -0.24
GCN1-201ENST00000300648 DACH1Q9UI36 760 aa13.53□□□□□ -0.24
GCN1-201ENST00000300648 BRD4O60885 1362 aaPredicted RBP13.53□□□□□ -0.24
GCN1-201ENST00000300648 PDE4CQ08493 712 aa13.53□□□□□ -0.24
GCN1-201ENST00000300648 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
GCN1-201ENST00000300648 STK26Q9P289 416 aa13.52□□□□□ -0.24
GCN1-201ENST00000300648 TXLNAP40222 546 aa13.52□□□□□ -0.24
GCN1-201ENST00000300648 TSPY26PQ9H489 355 aa13.52□□□□□ -0.24
GCN1-201ENST00000300648 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.24
GCN1-201ENST00000300648 COG3Q96JB2 828 aa13.52□□□□□ -0.24
GCN1-201ENST00000300648 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
GCN1-201ENST00000300648 ZNF396Q96N95 335 aaPredicted RBP13.52□□□□□ -0.25
GCN1-201ENST00000300648 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
GCN1-201ENST00000300648 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
GCN1-201ENST00000300648 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.25
GCN1-201ENST00000300648 SUPT6HQ7KZ85 1726 aaKnown RBP13.52□□□□□ -0.25
GCN1-201ENST00000300648 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
GCN1-201ENST00000300648 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
GCN1-201ENST00000300648 ZNHIT6Q9NWK9 470 aaKnown RBP13.51□□□□□ -0.25
GCN1-201ENST00000300648 SART3Q15020 963 aaKnown RBP13.51□□□□□ -0.25
GCN1-201ENST00000300648 NFKBIBQ15653 356 aa13.51□□□□□ -0.25
GCN1-201ENST00000300648 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
GCN1-201ENST00000300648 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
GCN1-201ENST00000300648 TDRD9Q8NDG6 1382 aaKnown RBP13.51□□□□□ -0.25
GCN1-201ENST00000300648 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
GCN1-201ENST00000300648 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.257e-7■■■□□ 14.6
GCN1-201ENST00000300648 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 VPS37CA5D8V6 355 aaPredicted RBP13.5□□□□□ -0.25
GCN1-201ENST00000300648 EZRP15311 586 aaKnown RBP13.5□□□□□ -0.25
GCN1-201ENST00000300648 GNAI1P63096 354 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 HSP90AB2PQ58FF8 381 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 CCDC192P0DO97 292 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 FHOD3Q2V2M9 1422 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 CCDC146Q8IYE0 955 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
GCN1-201ENST00000300648 CT47B1P0C2W7 299 aaPredicted RBP13.49□□□□□ -0.25
GCN1-201ENST00000300648 HECW1Q76N89 1606 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
GCN1-201ENST00000300648 TEFQ10587 303 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 NEFHP12036 1026 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 CBFA2T2O43439 604 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 MCM3P25205 808 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 CTDP1Q9Y5B0 961 aaPredicted RBP13.49□□□□□ -0.25
GCN1-201ENST00000300648 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
GCN1-201ENST00000300648 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
GCN1-201ENST00000300648 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
GCN1-201ENST00000300648 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
GCN1-201ENST00000300648 CNTROBQ8N137 903 aa13.48□□□□□ -0.25
GCN1-201ENST00000300648 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
GCN1-201ENST00000300648 HFM1A2PYH4 1435 aa13.48□□□□□ -0.25
GCN1-201ENST00000300648 STIM1Q13586 685 aa13.47□□□□□ -0.25
GCN1-201ENST00000300648 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
GCN1-201ENST00000300648 AXDND1Q5T1B0 1012 aaPredicted RBP13.47□□□□□ -0.25
GCN1-201ENST00000300648 TRAK2O60296 914 aa13.47□□□□□ -0.25
GCN1-201ENST00000300648 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
GCN1-201ENST00000300648 GBP3Q9H0R5 595 aa13.46□□□□□ -0.25
GCN1-201ENST00000300648 CCDC112Q8NEF3 446 aa13.46□□□□□ -0.25
GCN1-201ENST00000300648 PANK3Q9H999 370 aa13.46□□□□□ -0.25
GCN1-201ENST00000300648 CASKIN1Q8WXD9 1431 aa13.46□□□□□ -0.26
GCN1-201ENST00000300648 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.26
GCN1-201ENST00000300648 ERC1Q8IUD2 1116 aa13.45□□□□□ -0.26
GCN1-201ENST00000300648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■■■■■ 59.9
GCN1-201ENST00000300648 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
GCN1-201ENST00000300648 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
GCN1-201ENST00000300648 COG6Q9Y2V7 657 aa13.44□□□□□ -0.26
GCN1-201ENST00000300648 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
GCN1-201ENST00000300648 FGD6Q6ZV73 1430 aa13.44□□□□□ -0.26
GCN1-201ENST00000300648 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
GCN1-201ENST00000300648 SYCP1Q15431 976 aa13.44□□□□□ -0.26
GCN1-201ENST00000300648 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
GCN1-201ENST00000300648 DYDC1Q8WWB3 177 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms